case someone else tries to institute such a regime but
is getting friction due to that point in particular.
Good stuff, though .. thanks for sharing that!
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medica
that
these tools (vagrant, chef, puppet) are built to handle such cases.
I'd imagine you'd probably need a location where you can grab the
precise (versioned) packages for the things you are specifying, but
...
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
Ugh, sorry, I meant to say:
On Thu, Feb 28, 2013 at 8:49 PM, Steve Lianoglou
wrote:
[snip]
> The development version of data.table no longer exports J from, but
> once could still use J inside data.tabe[ ... ] calls.
The development version of data.table no longer exports J, so this
sho
not sure what
version of data.table you can get by installing from R-forge, but you
can either check out from subversion or download the latest source
tar-ball from R-forge and install from source ...
HTH,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-K
.
> (also, who decided to name this thing "spam"? i suppose it seemed
> cute at the time but it is virtually impossible to google for. )
That would be the author of the package.
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Cent
ue, then yes:
http://cran.cnr.Berkeley.edu/bin/linux/ubuntu/
HTH,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.
ffering such functions would make it more clear and consitent to use
>>> R here, because all those functions are then available for row and
>>> col and the functionality is appended in the name (Mean, Sum etc.).
>>>
>>> I think the basic things that should be ava
Hi,
I'm not sure I follow ... I think we're in total agreement, but it
sounds like you're suggesting we aren't.
On Sun, Mar 18, 2012 at 4:40 PM, Peter Meilstrup
wrote:
> On Sun, Mar 18, 2012 at 12:48 PM, Steve Lianoglou
> wrote:
[snip]
>> > Right, the user
is "exhibit B"
...
and not (using R-2.15.0 beta) (exhibit B):
Error in merge.data.frame(d1, d2, by = "a", suffixes = c("", ".y")) :
there is already a column named 'b'
I can take a crack at a patch to keep the "rescue user from surprises&qu
...) XXX
> f(2, X=3) # returns 3
>
> so name your arg to new
[/snip]
[facepalm]
Jeez ... I totally knew that, too ... just wasn't putting 2 and 2
together, here.
Thanks for taking the time to point that out.
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Bi
3 4 5 6 7 8 9 10
Slot "Cost":
[1] 1
Slot "eps":
[1] 0.
===
I was fishing around the R-devel mailing list w/ that error message to
see if anything turned up but I wasn't having any luck so it took a
while to figure out what was going on.
Is this kn
gt;
> (13) Packages that have their own cross-validation functions should
> allow the users to pass in the specific folds/resamping indicators to
> maintain consistency across similar functions in other packages.
>
> (14) [OCD] For binary classification models, model the probability of
&g
hub.com/hadley/devtools/blob/master/R/install.r#L57
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Contact Info: http://cbio.mskcc.org/~lianos/contact
_
ersion
repo when you are ready to submit to CRAN and take advantage of
r-forge's automated building and submission mojo.
My 2 cents,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medi
Hi Simon,
On Fri, Sep 9, 2011 at 5:32 PM, Simon Urbanek
wrote:
>
> On Sep 9, 2011, at 10:30 AM, Steve Lianoglou wrote:
>
>> Hi Simon, Prof. Ripley, and Dirk,
>>
>> First: thanks again for the tips, it's great to have some of the "top
>> bRass&qu
:
>> On Thu, 8 Sep 2011, Steve Lianoglou wrote:
[snip]
About the architecture thing:
>>> Ok, sorry for being imprecise. Let's see if we can figure out what it
>>> is (more precise details are at the bottom of the email). I see x86_64
>>> on every 64bi
Hi Simon,
Thanks for the quick response.
Comments in line:
On Thu, Sep 8, 2011 at 4:11 PM, Simon Urbanek
wrote:
>
> On Sep 8, 2011, at 3:59 PM, Steve Lianoglou wrote:
>
>> Hi,
>>
>> Essentially: subject line says it all.
>>
>> I've created a package
t; via Makevars, or somehow specify the package as 64bit
only to see if the package can go up on CRAN until I can find time to
fix the problem (if/when).
Thanks,
-steve
On Thu, Sep 8, 2011 at 3:59 PM, Steve Lianoglou
wrote:
> Hi,
>
> Essentially: subject line says it all.
>
> I'
y install instructions for people to d/l my source
package externally and use it that way.
Thanks,
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
C
email boxes don't get flooded. gmail then takes care
of the threading as you'd expect for each mailing list ...
Maybe you'd find that setup helpful.
-steve
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kett
with two sets of code.
And you could also try using Hadley's devtools package:
https://github.com/hadley/devtools/
Last I tried to use it, there was some problems with some S4isms (that
maybe were my fault(?)) so I switched back to sourcing my
development-package-dirs (which is fine until yo
ore or less ordinary LaTeX files that you can embed R code
into. Very handy to know how to use, actually, even outside of the
"Package Authoring" context, so ... perhaps you can consider it as
good exercise if you decide to take it on :-)
But again, you can always go the other rout
case you've never
stumbled on this gem:
google for "recursion" and look for Google's "Did you mean" suggestion ...
--
Steve Lianoglou
Graduate Student: Computational Systems Biology
| Memorial Sloan-Kettering Cancer Center
| Weill Medical College of Cornell University
Con
ctions of *.Rd files are run during R
CMD check ... so, if you're trying to load data from a suggested
package that may not be installed, perhaps you can wrap those code
blocks with \dontrun{}.
For more info: this is covered in the "Writing R Extensions," but is
also describe
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