Re: [Rd] Wayland Display Support in R Plot

2023-10-30 Thread Roger Bivand
I also noticed this: https://www.theregister.com/2023/10/13/gnome_proposes_dropping_x11/ which is concerning. Until now, I've retained X11 on Fedora because of difficulties in screen sharing via zoom in Wayland sessions. Roger -- Roger Bivand Emeritus Professor Norwegian School of Econ

Re: [Rd] Bug in installing rgdal

2018-02-23 Thread Roger Bivand
Wrong list. Try R-sig-geo, if you do, confirm that you read the readme in the source package since you are installing from source, and include relevant information from configure. Almost certainly this tells you that you have not installed the devel rpms or debs for gdal or proj. Roger Bivand

Re: [Rd] Error possibly related with environments/namespace

2015-09-30 Thread Roger Bivand
Frederico Mestre gmail.com> writes: > > Hello all, > > I've got a problem with a function in a R package I've developed > (MetaLandSim). > The function with the problem is a GRASS script embedded in a portmanteau function (doing too much at once). This list is not appropriate, and http://list

Re: [Rd] alternate licensing for package data?

2015-04-22 Thread Roger Bivand
Martyn Plummer iarc.fr> writes: > > I think this is covered well by the CRAN repository policy: > http://cran.r-project.org/web/packages/policies.html > > The two key license requirements are that: > 1) CRAN must have a perpetual license to distribute the package > 2) The package license shou

Re: [Rd] [RFC] A case for freezing CRAN

2014-03-20 Thread Roger Bivand
Gavin Simpson gmail.com> writes: > ... > > > To my mind it is incumbent upon those wanting reproducibility to build > the tools to enable users to reproduce works. When you write a paper > or release a tool, you will have tested it with a specific set of > packages. It is relatively easy to wo

Re: [Rd] eigen(symmetric=TRUE) for complex matrices

2013-06-19 Thread Roger Bivand
peter dalgaard gmail.com> writes: > > ... > > There could be compiler issues. It could also be that the internal LAPACK uses a newer version than the > external libs and a bug was introduced in between them. Running: N <- 100 jj <- matrix(0,N,N) A <- exp(-0.1*(row(jj)-col(jj))^2) min(eigen(A

Re: [Rd] Matrix does not build with R trunk since Oct.

2013-02-16 Thread Roger Bivand
Hin-Tak Leung users.sourceforge.net> writes: > > --- On Fri, 15/2/13, Simon Urbanek r-project.org> wrote: > > > On Feb 15, 2013, at 1:55 PM, Hin-Tak Leung wrote: > > > > > Look. I don't see this as "my" problem - as far as I am > > concerned, I have donated my time - and over and over - to >

Re: [Rd] problem with vignettes when S4 classes in packages overlap

2012-09-19 Thread Roger Bivand
ines are entered in an R session. (Using R version 2.15.1 (2012-06-22) -- "Roasted Marshmallows" on Ubuntu) Paul -- Roger Bivand Department of Economics, NHH Norwegian School of Economics, Helleveien 30, N-5045 Bergen, Norway. voice: +47 55 95

Re: [Rd] pointers on including SVN revision number in package info?

2012-01-07 Thread Roger Bivand
Ben Bolker gmail.com> writes: > > > I'm trying to keep debugging of a development package relatively sane. > ... > > Or can people suggest other useful strategies for keeping track of > which development (micro-)version a random user might be working with? > Rather than update the DESCR

Re: [Rd] Problem exporting table with many columns to dbf

2011-08-31 Thread Roger Bivand
Nacho Uve gmail.com> writes: > > Hello, > > I'm newbie in R and I have a problem exporting a table with many columns to > a dbf file. In many sources, the maximum number of fields is said to be 128 or 255. I have seen a reference to 1024. It varies a great deal with the software being used. DB

Re: [Rd] R CMD check --configure-args?

2011-06-28 Thread Roger Bivand
On Tue, 28 Jun 2011, Uwe Ligges wrote: On 28.06.2011 11:35, Roger Bivand wrote: R CMD INSTALL takes a --configure-args argument, but I cannot see how to pass the same values in R CMD check, which returns a: Warning: unknown option ‘--configure-args=... (R 2.13.0). What am I missing

[Rd] R CMD check --configure-args?

2011-06-28 Thread Roger Bivand
R CMD INSTALL takes a --configure-args argument, but I cannot see how to pass the same values in R CMD check, which returns a: Warning: unknown option ‘--configure-args=... (R 2.13.0). What am I missing? Roger -- Roger Bivand Department of Economics, NHH Norwegian School of Economics

Re: [Rd] Some extensions to class inheritance and method selection

2009-04-29 Thread Roger Bivand
In released 2.9.0, we have been seeing warnings when installing sp, for example: Warning in .checkS3forClass(class...@classname, where, names(exts)) : Some of the superclasses in the definition of class "SpatialPoints" have apparent S3 methods. DANGER: the new class will not inherit these meth

Re: [Rd] ** operator

2008-05-15 Thread Roger Bivand
;^"(5, 2) [1] 25 "**"(5, 2) Error: could not find function "**" 5 ^ 2 [1] 25 5 ** 2 [1] 25 that is, it is truly obfuscated and not accessible using contemporary interfaces? Roger Barry __ R-devel@r-project.org mailing l

Re: [Rd] (PR#11281) Bug in R 2.7 for over long lines (crasher+proposed fix!)

2008-05-13 Thread Roger Bivand
on that you get crashes when working on R <-> >>> Swig interaction. Can you construct simple R code >>> producing the crash? >> >> No. I put however difficult autogenerated (~800k big!) .R >> code that will crash R 2.7 at >> http://nn7.de/debugging/Fea

Re: [Rd] S4 slot with NA default

2008-03-26 Thread Roger Bivand
number" > and I want > the sense to be "not available". > > > > Any advice? > > > > > > -- > Robin Hankin > Uncertainty Analyst and Neutral Theorist, > National Oceanography Centre, Southampton > European Way, Southampton SO14 3ZH, UK >

Re: [Rd] R-console vs. bash console (execution halted)

2008-03-11 Thread Roger Bivand
gt; Ciao, >> Chris >> >> _______ >> Christophe Lienert >> ETH Zurich >> Institute of Cartography >> Wolfgang-Pauli-Str. 15 >> HIL G 13.3 >> CH-8093 Zurich >> SWITZERLAND >> >&

[Rd] R for Windows FAQ 2.8 suggestion

2008-02-24 Thread Roger Bivand
y is asking for trouble and deprecated. But I'm not sure about that. Of course, I'm being very optimistic, hoping that users will read the FAQ, but at least they can be pointed to it when they get into trouble. Roger -- Roger Bivand Economic Geography Section, Department of Economic

Re: [Rd] knnFinder package

2008-01-14 Thread Roger Bivand
d. Roger > > Best regards, > > Greg > --- > Gregoire Pau > EMBL/EBI Cambridge, UK > http://www.ebi.ac.uk/~gpau > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Biv

Re: [Rd] Returning vectors of two different data types back to R environment (from C).

2007-11-16 Thread Roger Bivand
packages. > > Thanks very much for your help! > Charles > > [[alternative HTML version deleted]] > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geo

Re: [Rd] no visible binding

2007-10-12 Thread Roger Bivand
t;, "slm") > fit > } > > > url:www.econ.uiuc.edu/~rogerRoger Koenker > email[EMAIL PROTECTED] Department of Economics > vox: 217-333-4558University of Illinois > fax: 217-244-6678Champai

Re: [Rd] Bridging R to OpenOffice

2007-03-28 Thread Roger Bivand
ike to thank you in advance for your effort. > > > > Sincerely, > > > > Leonard Mada > > > > __ > > R-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-devel > &g

Re: [Rd] C vs. C++ as learning and development tool for R

2007-01-19 Thread Roger Bivand
> (317) 663-0513 Home (no voice mail please) > > 1-(317)-536-2730 FAX > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geography Section, Department

Re: [Rd] Manipulating R lists in C

2006-11-17 Thread Roger Bivand
ypeStr ); >SET_VECTOR_ELT( dimnames, 1, priceStr); >SET_VECTOR_ELT( dimnames, 2, volumeStr ); > >// assign vector to original list of data >setAttrib( priceList, R_DimNamesSymbol, dimnames ); <- I think this > is wrong but I don;t know what i

Re: [Rd] c.factor

2006-11-15 Thread Roger Bivand
intended? > Then I can use 'attr' for any old annotations, for > example in my light bulb brightness study I could do: > > sample1 = c(4.2,4.5,4.8,4.1) > attr(sample1,'dim') = TRUE > > sample2 = c(5.6,5.8,6.7,6.5,9.3) > attr(sample2,'dim') =

Re: [Rd] library loading errors (PR#9317)

2006-10-25 Thread Roger Bivand
-, > coordnames, coordnames<-, gridded, polygons, polygons<-, dimensions, [, > transform, overlay, plot, recenter, spplot, spsample, summary > Error: package 'sp' could not be loaded > > > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/lis

Re: [Rd] expression as a parameter of binom.test (PR#9288)

2006-10-11 Thread Roger Bivand
t; while > > > binom.test(5600,1) > > yields correct result. > > The same error occurrs for > > binom.test(0.57*1,1) > > ______ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mail

Re: [Rd] possible bug? (PR#9285)

2006-10-10 Thread Roger Bivand
> University of Essex > > Colchester CO4 3SQ > > United Kingdom > > Tel: +44-(0)1206-872769 > > FAX: +44-(0)1206-872724 > > email: [EMAIL PROTECTED] > > * > > =20 > > > [[alternative HTML version deleted]]

Re: [Rd] Where to put sgml file

2006-10-09 Thread Roger Bivand
ou can always get to it with system.file(). > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics a

Re: [Rd] standardization of slot access

2006-09-26 Thread Roger Bivand
#x27;t conclude that it is only rarely used, and would recommend its use in explaining to students/users what is going on in new-style objects. Roger > > Cheers, > > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Admini

Re: [Rd] S4 changes - sp fails

2006-09-03 Thread Roger Bivand
some more. All reports are appreciated. Some are > easier for me to check out than others (I'm working from a home setup > that does not have all of CRAN available (!) so it takes time to test a > package with many dependencies in "CMD check"s view of things.) >

Re: [Rd] S4 changes - sp fails

2006-09-01 Thread Roger Bivand
On Fri, 1 Sep 2006, Roger Bivand wrote: > On Fri, 1 Sep 2006, Prof Brian Ripley wrote: > > > Since writing that, I have found that there is a similar problem with > > testing mvoutliers (which does load sp), and it depends on exactly what > > has been done in what orde

Re: [Rd] S4 changes - sp fails

2006-09-01 Thread Roger Bivand
"graphics" "grDevices" "utils" "datasets" [7] "base" other attached packages: sp "0.8-19" > > I now suspect there is a protection problem in the new S4 dispatch code. > Using gctorture/valgrind may help loc

Re: [Rd] S4 changes - sp fails

2006-09-01 Thread Roger Bivand
s changed between released 0.8-18 and CVS 0.8-19. Roger > > There are around a dozen S4-using packages on CRAN that are currently > failing their checks: some look like newly-discovered bugs but some look > like problems in S4 dispatch (even of S3 dispatch for S3 generics turned >

[Rd] S4 changes - sp fails

2006-08-31 Thread Roger Bivand
ds) in NAMESPACE; .onLoad <- function(lib, pkg) require(methods) is in the first R source file in Collate: order. Should the methods package be being invoked in some other way, is there a reason why the installed package appears to run examples successfully that fail under CMD check?

Re: [Rd] Inaccuracy in seq() (PR#9189)

2006-08-30 Thread Roger Bivand
_ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Hell

Re: [Rd] Artefacts in (screen viewed) PDF output

2006-08-03 Thread Roger Bivand
On Wed, 2 Aug 2006, Paul Murrell wrote: > Hi > > > Roger Bivand wrote: > > This issue is probably to do with on-screen viewing of PDF files written > > from R (2.3.1, Windows XP, RHEL 4), not with how the files are produced. > > So the question is mainly t

[Rd] Artefacts in (screen viewed) PDF output

2006-08-01 Thread Roger Bivand
le when acroread is used in presentation mode. Any insight would be very useful. Roger -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen, Nor

Re: [Rd] Call trellis function in a function (PR#8827)

2006-05-02 Thread Roger Bivand
gards > -- > Fan > > __________ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics a

Re: [Rd] R CMD check: non source files in src on (2.3.0 RC (2006-04-19 r37860))

2006-04-20 Thread Roger Bivand
t;want in there, especially the _Makefile as I like to build test programs > >>directly and I want to be able to build exactly what I check out from > >>my source code repository without having to copy files in and out. > > > > > > All described in TFM, includi

Re: [Rd] Help on interfacing C++ with R

2006-03-13 Thread Roger Bivand
list() > > The output is correct, but if I > >.C("testIntDivision", 4, 2); > > it generated the dialog box claiming "R has encountered a problem and > needs to be closed...Please tell Microsoft about this problem", > sigh. > > So what&#

Re: [Rd] Problem loading package with version, S4 classes and NAMESPACE

2006-01-20 Thread Roger Bivand
On Fri, 20 Jan 2006, Roger Bivand wrote: > I've run into a problem that I hope has an obvious solution. The sp > package uses S4 classes and has a NAMESPACE, and when installed without > package versions, runs OK, passes R CMD check, and so on. > > A user reported that he

[Rd] Problem loading package with version, S4 classes and NAMESPACE

2006-01-20 Thread Roger Bivand
removes the problem, that is the skeletal package works --with-package-versions, but this isn't an option. At present, the methods package is invoked in DESCRIPTION in the Depends: field, by "import(methods)" in NAMESPACE, and by .onLoad <- function(lib, pkg) require(me

Re: [Rd] read.table with ":" in column names (PR#8511)

2006-01-20 Thread Roger Bivand
20 0 0 > GO:0040 0 0 > GO:0120 0 0 > GO:0140 0 0 > GO:0150 0 0 > GO:0180 0 0 > GO:0190 0 0 > > Thanks for helping, and > > Emiel

Re: [Rd] external pointers

2005-12-11 Thread Roger Bivand
eading raster images to first return a pointer to a dataset (on disk) opened by GDAL, then to use the object to retrieve (parts of) the data. Most of the .Call/SEXP machinery is there (for the C++ case, GDAL is C++, so GDAL manages its own memory for its objects). The package also uses S4 classes, which m

[Rd] Manual page example of plot.window needs fixing

2005-10-11 Thread Roger Bivand
8) } \keyword{aplot} with reference to Prof. Ripley's message of 5 May: http://finzi.psych.upenn.edu/R/Rhelp02a/archive/55417.html -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, Helleveien 30, N-5045 Bergen,

Re: [Rd] How do I install rbugs ? (PR#8183)

2005-10-06 Thread Roger Bivand
Branch > Sykehusveien 23 > PB 6404 > N-9294 Troms=F8 > Tlf.: + 47 77 60 97 28 > Faks/Fax: + 47 77 60 97 01 > E-mail: [EMAIL PROTECTED] > Internett: imr.no > > =20 > > __ > R-devel@r-project.org mailing list > ht

Re: [Rd] NUMERIC_POINTER question

2005-09-13 Thread Roger Bivand
; > cheers > Eryk > > __ > R-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-devel > -- Roger Bivand Economic Geography Section, Department of Economics, Norwegian School of Economics and Business Administration, H