nother directory before starting long-running jobs on such a
system.'
On 21/04/2017 11:49, Mikko Korpela wrote:
Temporary files not accessed for a long time are automatically removed
in some Linux distributions and probably other operating systems too,
depending on system configuration. This m
s and directories
periodically from /tmp, for example by a cron job running tmpwatch. Set
TMPDIR to another directory before starting long-running jobs on such a
system.'
I am sorry for having missed this part of the manual, where the issue
indeed is clearly documented.
On 21/04/2017 11:49, Mik
4': No
such file or directory
b <- print(tempdir())
# [1] "/tmp/user/1069138/RtmpGc9M5z"
identical(a, b)
# [1] TRUE
dir.exists(b)
# [1] FALSE
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
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https://stat.ethz.ch/mailman/listinfo/r-devel
With new R releases soon to come, I suggest updating the Rcopyright
macro in "doc/manual/R-defs.texi" to use year 2017.
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
__
R-devel@r-project.org mailing
re the error occurs:
Error in quantile.default(Ad1.maybe.nat, probs = (1 - ascent.crit.q)) :
missing values and NaN's not allowed if 'na.rm' is FALSE
The error can be investigated with the usual tools, e.g. traceback() and
debug().
--
Mikko Korpela
Department of Geoscien
h 'bison -l -y' (GNU Bison
version 2.7.1, erroneusly reporting the version as 2.7.12-4996) to
create the corresponding .c files.
As the warnings are only given when the user asks for "extra" warnings,
this is obviously non-critical and not urgent, but might be something
ugs.freebsd.org/bugzilla/show_bug.cgi?id=209729>.
I'll add a workaround in R-devel in r72147: let us know if that does not
suffice.
Please let me know, if I should provide more information or can test
something.
Many thanks in advance,
Rainer Hurling
--
Mikko
7; (2)
Is your database installed and up and running?
Do you have the correct username and password selected in localconfig?
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
__
R-devel@r-project.org mailing list
https://sta
I found some trivial typos, mostly unmatched parentheses, in the R
manuals. More information and suggested fixes are in the attached diff file.
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
Index: doc/manual/R-admin.texi
R bugzilla,
<https://bugs.r-project.org/bugzilla3/show_bug.cgi?id=17213>. The patch
included in that report is mainly about detecting physical CPUs across
multiple CPU sockets, but should also fix this issue.
--
Mikko Korpela
Department of Geosciences and Geography
Univer
be "dialects of TeX
are used for different purposes".
A patch file against R-devel revision 71696 is included.
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
Index: doc/manual/R-intro.texi
===
I noticed the following typos in the file "config.site":
The word "compilier" should be "compiler", occurs twice (in the R-devel
version). Also, "It not" should be "If not" and "overriden" should be
"overridden".
--
Mikko
On 02/10/16 11:59, Prof Brian Ripley wrote:
On 27/09/2016 10:49, Mikko Korpela wrote:
When 'getOption("checkPackageLicense")' is 'TRUE' and the user calls
'library(grid)' for the first time, R asks the user to either accept or
decline the package lice
ary.R". I think one solution could be to add
something like
if(identical(pkgInfo$DESCRIPTION[["Priority"]], "base")) return()
to the beginning of checkLicense(), or add more packages to the
hard-coded exemption list checked before calling checkLicense().
Also, in find.pa
In ?image (src/library/graphics/man/image.Rd), the text fragment "will
show though" should probably be "will show through".
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
__
R-devel@r-project.or
dance=TRUE}
The package builds just fine after doing that, on this computer. The
R-Forge history of sos.Rnw shows the line was added on May 12, revision 237.
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
__
R-dev
d:
> iconv("\x9c25.63", from = "latin1")
[1] "\u009c25.63"
> iconv("\xa325.63", from = "latin1")
[1] "£25.63"
--
Mikko Korpela
Department of Geosciences and Geography
University of Helsinki
__
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
On 18/05/16 13:50, Martin Maechler wrote:
Mikko Korpela
on Wed, 18 May 2016 13:05:24 +0300 writes:
> I get an error when running "make check" after building
> R-devel r70629 on Ubuntu 14.04.
> Here are the relevant
> lines in the file &
en_GB"
LC_COLLATE="en_GB"
LC_MONETARY=fi_FI.UTF-8
LC_MESSAGES="en_GB"
LC_PAPER="en_GB"
LC_NAME="en_GB"
LC_ADDRESS="en_GB"
LC_TELEPHONE="en_GB"
LC_MEASUREM
after checking against R-devel rev 70247
> or higher.
>
> Duncan Murdoch
>
> On 25/02/2016 5:54 AM, Mikko Korpela wrote:
>> On 25.02.2016 11:31, Mikko Korpela wrote:
>>> On 23.02.2016 14:06, Mikko Korpela wrote:
>>>> On 23.02.2016 11:37, Martin
ttp://linux.die.net/man/1/realpath
What do you mean by "different meaning"? How are the command line tools
[1] relevant when R is using the C function 'readlink'?
http://pubs.opengroup.org/onlinepubs/9699919799/functions/readlink.html
https://www.freebsd.org/cgi/man.cgi?query=r
On 25.02.2016 11:31, Mikko Korpela wrote:
> On 23.02.2016 14:06, Mikko Korpela wrote:
>> On 23.02.2016 11:37, Martin Maechler wrote:
>>>>>>>> nospam@altfeld-im de
>>>>>>>> on Mon, 22 Feb 2016 18:45:59 +0100 writes:
>>>
>>
On 23.02.2016 14:06, Mikko Korpela wrote:
> On 23.02.2016 11:37, Martin Maechler wrote:
>>>>>>> nospam@altfeld-im de
>>>>>>> on Mon, 22 Feb 2016 18:45:59 +0100 writes:
>>
>> > Dear R developers
>> > I think
On 24.02.2016 15:47, Duncan Murdoch wrote:
> On 23/02/2016 7:06 AM, Mikko Korpela wrote:
>> On 23.02.2016 11:37, Martin Maechler wrote:
>>>>>>>> nospam@altfeld-im de
>>>>>>>> on Mon, 22 Feb 2016 18:45:59 +0100 writes:
>>>
else
>
> But just looking a bit at such a file() object with writeLines()
> seems slightly revealing, as e.g., 'eol' does not seem to
> "work" for this encoding:
>
> > fn <- tempfile("ffoo"); ff <- file(fn, open="w", encod
The two CRAN packages I'm (co)authoring, dplR and sisal, would both be
OK with the change. (Cc'ing to the Maintainer of dplR and my other email
address)
- Mikko
On 11.02.2016 17:02, Michael Lawrence wrote:
> Changing the vapply() behavior makes sense in principle. I analyzed
> the CRAN code base
; ‘"R-pkg"’. Otherwise there is no default domain.
At least "1.8.2 R messages" in R-exts implies that automatic domain
applies to ngettext(), too.
Tested on "R Under development (unstable) (2015-12-14 r69773)",
Platform: x86_64-pc-linux-gnu (64-bit).
--
Mikko Korp
ould be nice if R could
provide some protection against this, but it seems to be a non-trivial
task. Compiling the PCRE library with --disable-stack-for-recursion is
one solution.
--
Mikko Korpela
Aalto University School of Science
Department of Computer Science
Index: src/main/grep.c
On 19.11.2015 12:05, Martin Maechler wrote:
>>>>>> Mikko Korpela
>>>>>> on Wed, 18 Nov 2015 11:35:14 +0200 writes:
>
> > The NEWS for R-devel has the following item:
> >> The previously included versions of zlib, bzip2, xz and
mation in
'src/library/base/man/regex.Rd' is no longer valid:
> If PCRE support was compiled from the sources within R, the PCRE
> version is 8.36 as described here.
--
Mikko Korpela
Aalto University School of Science
Department of Computer Science
___
I noticed a small typo in ?Memory. See the diff at the bottom of the
message.
- Mikko
Index: src/library/base/man/Memory.Rd
===
--- src/library/base/man/Memory.Rd (revision 69448)
+++ src/library/base/man/Memory.Rd (working
nhances. For good practice with packages in the Suggests field,
> see §1.1.3.1 of ‘Writing R Extensions‘.
The CRAN Repository Policy,
http://cran.r-project.org/web/packages/policies.html, suggests using the
most recent R-devel for package checking before submission.
--
Mikko Korpela
Aalto Univers
directory. Tested on R development version r59731 running on Ubuntu
10.10 64 bit.
--
Mikko Korpela
Aalto University School of Science
Department of Information and Computer Science
encTest3.tar.gz
Description: GNU Zip compressed data
Index: src/library/tools/R/Rd2pdf.R
===
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