[Rd] R process killed when allocating too large matrix (Mac OS X)

2016-05-03 Thread Marius Hofert
Dear expeRts, The following code leads to R being killed (under Mac OS X 10.11.4; R installed from source; also happened under a previous unstable version): m <- matrix(0, 10, 10) I expected an error that a vector of this size could not be allocated. Besides the above (a bug?), how can

Re: [Rd] vignette/knitr help

2016-05-03 Thread Mick Jordan
On 5/3/16 12:19 PM, Thierry Onkelinx wrote: Dear Mick, knitr doesn't depends on rmarkdown. It's the vignette that depends on both knitr (for handle the R chunks) and rmarkdown (for the output format rmarkdown::html_vignette). https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Package-

Re: [Rd] vignette/knitr help

2016-05-03 Thread Thierry Onkelinx
Dear Mick, knitr doesn't depends on rmarkdown. It's the vignette that depends on both knitr (for handle the R chunks) and rmarkdown (for the output format rmarkdown::html_vignette). https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Package-Dependencies states: "The ‘Suggests’ field ...

Re: [Rd] vignette/knitr help

2016-05-03 Thread Mick Jordan
On 5/3/16 11:29 AM, Thierry Onkelinx wrote: Dear Mick, Note that both knitr and rmarkdown are listed under Suggests: both are required to compile the vignette. Installing rmarkdown should solve the problem. If not, please provide more information. OS, R version, digest version, ... This is occ

Re: [Rd] vignette/knitr help

2016-05-03 Thread Thierry Onkelinx
Dear Mick, Note that both knitr and rmarkdown are listed under Suggests: both are required to compile the vignette. Installing rmarkdown should solve the problem. If not, please provide more information. OS, R version, digest version, ... Best regards, ir. Thierry Onkelinx Instituut voor natuur-

[Rd] vignette/knitr help

2016-05-03 Thread Mick Jordan
I need some help understanding a problem running the tests on the 'digest' package. Initially, I got the message that the 'knitr' package was needed to run vignettes: Running vignettes for package ‘digest’ Error in loadVignetteBuilder(vigns$pkgdir) : vignette builder 'knitr' not found So I i

Re: [Rd] R-3.2.5 Mac OS X package

2016-05-03 Thread Simon Urbanek
On May 3, 2016, at 10:40 AM, Mick Jordan wrote: > On 5/2/16 4:25 PM, David Winsemius wrote: >>> On May 2, 2016, at 3:45 PM, Mick Jordan wrote: >>> >>> When is the R-3.2.5 binary for Mac OS X likely to show up? >> Where did you look? I see both Mavericks and SnowLeopard fork binaries with >> o

Re: [Rd] R-3.2.5 Mac OS X package

2016-05-03 Thread Gábor Csárdi
On Tue, May 3, 2016 at 1:25 AM, David Winsemius wrote: > >> On May 2, 2016, at 3:45 PM, Mick Jordan wrote: >> >> When is the R-3.2.5 binary for Mac OS X likely to show up? > > Where did you look? I see both Mavericks and SnowLeopard fork binaries with > or without r.app GUI at http://r.research.

Re: [Rd] R-3.2.5 Mac OS X package

2016-05-03 Thread Mick Jordan
On 5/2/16 4:25 PM, David Winsemius wrote: On May 2, 2016, at 3:45 PM, Mick Jordan wrote: When is the R-3.2.5 binary for Mac OS X likely to show up? Where did you look? I see both Mavericks and SnowLeopard fork binaries with or without r.app GUI at http://r.research.att.com/ I've been using t