[Rd] updated R-cairo bridge, official R-3.1.*-mavericks.pkg crippled, snpMatrix 1.19.0.20

2015-01-20 Thread Hin-Tak Leung
R.framework-Versions-Resources-library-grDevices-libs-cairo_20150120.tgz in http://sourceforge.net/projects/outmodedbonsai/files/R/ are dropped in replacement to the cairo.so's in the official R binaries (2.15.3, 3.0.3, 3.1.2). updated to cairo-1.12.18 and freetype-2.5.4. The official R binaries'

Re: [Rd] default min-v/nsize parameters

2015-01-20 Thread Henrik Bengtsson
Thanks for this. Anyone know how I can find what those initial settings are from within R? Do I need to parse/look at both environment variables R_NSIZE and R_VSIZE and then commandArgs()? /Henrik On Tue, Jan 20, 2015 at 1:42 AM, Martin Maechler wrote: >> Peter Haverty >> on Mon,

Re: [Rd] Link to NEWS.2 in NEWS is broken

2015-01-20 Thread Tal Galili
Thanks Peter and Martin. Cheers, Tal Contact Details:--- Contact me: tal.gal...@gmail.com | Read me: www.talgalili.com (Hebrew) | www.biostatistics.co.il (Hebrew) | www.r-statistics.com (English) ---

Re: [Rd] Link to NEWS.2 in NEWS is broken

2015-01-20 Thread peter dalgaard
I think Kurt has this in hand since the same issue affected src/base/NEWS.html. The fix seems to be just not to copy the html formatted NEWS to the file distribution folders and have any links in there point to doc/manuals/r-release/NEWS.html instead. The relative links to the parent directory

Re: [Rd] Link to NEWS.2 in NEWS is broken

2015-01-20 Thread Martin Maechler
> Tal Galili > on Tue, 20 Jan 2015 00:30:56 +0200 writes: > I am not sure where to post this. Maybe you could try to contact the CRAN maintainer by e-mail. (E-mail: you know the thing people did before they "posted" everything :-) ;-)) but I agree that it is not easy to find e-ma

Re: [Rd] [PATCH] Makefile: add support for git svn clones

2015-01-20 Thread Martin Maechler
> Dirk Eddelbuettel > on Mon, 19 Jan 2015 16:35:31 -0600 writes: > On 19 January 2015 at 17:11, Duncan Murdoch wrote: > | The people who would have to maintain the patch can't test it. I agree that this is good reason to not add delicate code to the R sources, indeed, howe

Re: [Rd] default min-v/nsize parameters

2015-01-20 Thread Martin Maechler
> Peter Haverty > on Mon, 19 Jan 2015 08:50:08 -0800 writes: > Hi All, This is a very important issue. It would be very > sad to leave most users unaware of a free speedup of this > size. These options don't appear in the R --help > output. They really should be added