Re: [Rd] creating a package from a development source tree

2014-07-01 Thread Greg Minshall
thanks! that, as did an off-list reply, gave me the clue i needed. cheers. __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] USE_CXX1X, Snow Leopard R binaries + Mavericks

2014-07-01 Thread Kevin Ushey
Hi R-devel, I'm noticing the following behaviour: writeLines("#include ", file = "test.cpp") Rcpp::sourceCpp("~/test.cpp") ## succeeds at trivial compile Sys.setenv("USE_CXX1X" = "yes") Rcpp::sourceCpp("~/test.cpp") ## fails; CXX nor CXX1X properly set (?) IIUC, R is not propagat

Re: [Rd] creating a package from a development source tree

2014-07-01 Thread Marc Schwartz
On Jul 1, 2014, at 10:26 AM, Greg Minshall wrote: > hi. this is sort of a software methodology question. > > i'm working on developing a package (with C source code). developing > it, i use autotools, git, make, and such like. as a result, there are > random files in my source code directory

[Rd] creating a package from a development source tree

2014-07-01 Thread Greg Minshall
hi. this is sort of a software methodology question. i'm working on developing a package (with C source code). developing it, i use autotools, git, make, and such like. as a result, there are random files in my source code directory that "R CMD check" would rather not see. some of these files

Re: [Rd] R CMD check warning with S3 method

2014-07-01 Thread Michael Lawrence
On Mon, Jun 30, 2014 at 6:19 AM, Duncan Murdoch wrote: > On 30/06/2014 8:51 AM, Michael Lawrence wrote: > >> I think it's generally nice to be able to compute on the network of >> imported and exported symbols, and exportFrom() preserves the information >> that a symbol has been forwarded. But le

Re: [Rd] Building R on Windows: mkdir of Rtools creates directories with read-only permissions [WEIRD]

2014-07-01 Thread Milan Bouchet-Valat
Le lundi 30 juin 2014 à 15:32 -0400, Duncan Murdoch a écrit : > On 30/06/2014 2:41 PM, Milan Bouchet-Valat wrote: > > Le lundi 30 juin 2014 à 05:23 -0400, Duncan Murdoch a écrit : > > > On 30/06/2014, 4:44 AM, Milan Bouchet-Valat wrote: > > > > On Thu Jan 9 2014 03:47 Henrik Bengtsson wrote: > > >

Re: [Rd] Error when compiling R with openblas

2014-07-01 Thread Dirk Eddelbuettel
On 1 July 2014 at 12:00, Alexander Braumann wrote: | I tried to compile R with openblas on a ubuntu 12.04 machine. I have to | say that I normally use the package system and that I have no experience | with compiling R. You do not need to do that. Just install the existing OpenBLAS package via

[Rd] Error when compiling R with openblas

2014-07-01 Thread Alexander Braumann
Hi, I tried to compile R with openblas on a ubuntu 12.04 machine. I have to say that I normally use the package system and that I have no experience with compiling R. I did the following: ./configure --enable-BLAS-shlib --enable-R-shlib LIBnn=lib --with-blas="-L/usr/lib/openblas-base/ -lope