Re: [Rd] R-3.0.2 - Win7_64 - alone_decoder.c: Permission denied error

2013-09-30 Thread Adler, Avraham
My problem appears to have been one of ignorance. I did not realize that once the directories were untarred, that copying the entire tree and renaming it may break permissions even on Windows. It appears that it does, as starting the compile immediately and not on a renamed copy seems to be prog

[Rd] R-3.0.2 - Win7_64 - alone_decoder.c: Permission denied error

2013-09-30 Thread Adler, Avraham
Hello. When trying to compile R-3.0.2 on Windows 7 64bit, I get an error relating to "alone_decoder.c: Permission denied." The entire error code is copied below. gcc -std=gnu99 -m64 -shared -o Riconv.dll Riconv.def win_iconv.o touch stamp gcc -std=gnu99 -m64 -I../../inc

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Henrik Bengtsson
On Mon, Sep 30, 2013 at 5:33 AM, Milan Bouchet-Valat wrote: > Hi! > > > It seems that read.table() in R 3.0.1 (Linux 64-bit) does not consider > quoted integers as an acceptable value for columns for which > colClasses="integer". But when colClasses is omitted, these columns are > read as integer

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Joris Meys
On Mon, Sep 30, 2013 at 5:27 PM, Milan Bouchet-Valat wrote: > Le lundi 30 septembre 2013 à 17:10 +0200, Joris Meys a écrit : > > Regardless of whether "stored as character" is interpreted the R way > > or the ASCII way, the point Joshua makes is rather valid. Mainly > > because read.table has an a

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Milan Bouchet-Valat
Le lundi 30 septembre 2013 à 17:10 +0200, Joris Meys a écrit : > Regardless of whether "stored as character" is interpreted the R way > or the ASCII way, the point Joshua makes is rather valid. Mainly > because read.table has an argument quote with default value \"'. This > means that at least acco

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Joris Meys
It is after all an R-related mailing list, and professor Ripley has set a certain standard ages ago ;) On Mon, Sep 30, 2013 at 5:19 PM, Milan Bouchet-Valat wrote: > Le lundi 30 septembre 2013 à 10:07 -0500, Joshua Ulrich a écrit : > > On Mon, Sep 30, 2013 at 9:45 AM, Milan Bouchet-Valat > wrote

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Milan Bouchet-Valat
Le lundi 30 septembre 2013 à 10:07 -0500, Joshua Ulrich a écrit : > On Mon, Sep 30, 2013 at 9:45 AM, Milan Bouchet-Valat > wrote: > > Le lundi 30 septembre 2013 à 08:38 -0500, Joshua Ulrich a écrit : > >> On Mon, Sep 30, 2013 at 7:33 AM, Milan Bouchet-Valat > >> wrote: > >> > Hi! > >> > > >> >

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Joris Meys
Regardless of whether "stored as character" is interpreted the R way or the ASCII way, the point Joshua makes is rather valid. Mainly because read.table has an argument quote with default value \"'. This means that at least according to R, everything between either " or ' should be seen as of type

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Joshua Ulrich
On Mon, Sep 30, 2013 at 9:45 AM, Milan Bouchet-Valat wrote: > Le lundi 30 septembre 2013 à 08:38 -0500, Joshua Ulrich a écrit : >> On Mon, Sep 30, 2013 at 7:33 AM, Milan Bouchet-Valat >> wrote: >> > Hi! >> > >> > >> > It seems that read.table() in R 3.0.1 (Linux 64-bit) does not consider >> > qu

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Milan Bouchet-Valat
Le lundi 30 septembre 2013 à 08:38 -0500, Joshua Ulrich a écrit : > On Mon, Sep 30, 2013 at 7:33 AM, Milan Bouchet-Valat > wrote: > > Hi! > > > > > > It seems that read.table() in R 3.0.1 (Linux 64-bit) does not consider > > quoted integers as an acceptable value for columns for which > > colClas

Re: [Rd] read.table() with quoted integers

2013-09-30 Thread Joshua Ulrich
On Mon, Sep 30, 2013 at 7:33 AM, Milan Bouchet-Valat wrote: > Hi! > > > It seems that read.table() in R 3.0.1 (Linux 64-bit) does not consider > quoted integers as an acceptable value for columns for which > colClasses="integer". But when colClasses is omitted, these columns are > read as integer

[Rd] predictions in nlme without fixed covariantes

2013-09-30 Thread ONKELINX, Thierry
Dear all, predict.lme() throws an error when the fixed part consists of only an intercept and using newdata. See the reproducible example below. I've tracked the error down to asOneFormula() which returns in this case NULL instead of a formula. Changing NULL instead of ~1 in that function (see

[Rd] read.table() with quoted integers

2013-09-30 Thread Milan Bouchet-Valat
Hi! It seems that read.table() in R 3.0.1 (Linux 64-bit) does not consider quoted integers as an acceptable value for columns for which colClasses="integer". But when colClasses is omitted, these columns are read as integer anyway. For example, let's consider a file named file.dat, containing: "