From R CMD check --help
--install-args= command-line args to be passed to INSTALL
I am pretty sure you have been pointed at that before, and we checked at
the time that it worked on Windows.
On 28/11/2012 17:19, Russell Almond wrote:
I'm having problems getting R CMD check to work co
> (even worse, path may contain '..' or
> likewise from a list.files(all.names=TRUE) call)
Would anyone's code break if "." and ".." were never in the output of
list.files() (or dir())? I find it tedious to skip them
whenever doing anything recursive in the file system. They are
not in the outpu
Hi,
file.remove(path) will remove an empty directory "on most Unix
platforms", but not on Windows, cf. help("file.remove"). A workaround
for Windows is then unlink(path, recursive=TRUE). However, unless
you're really careful and make sure 'path' is not empty, you may
delete more than you wish (e
Thanks, added.
Simon
On Nov 28, 2012, at 4:39 PM, Brian Diggs wrote:
> When I went to report a (very minor) bug today, I noticed that under the
> choices for Version, there was no entry for "R 2.15.2" nor "R 2.15.2
> patched". I could not find a contact email for the bug tracker itself, so I
>
On 11/28/2012 5:21 PM, Hadley Wickham wrote:
replicate(1000, {dev.new(); dev.off()})
R(83204,0xacdc1a28) malloc: *** mmap(size=16777216) failed (error code=12)
*** error: can't allocate region
*** set a breakpoint in malloc_error_break to debug
R(83204,0xacdc1a28) malloc: *** mmap(size=16777216)
I'm having problems getting R CMD check to work correctly on Windows 7 (64
bit) in a package that uses C code. What I want to do is to be able to pass
the equivalent of the "--force-biarch" option to check, but this is only
supported for INSTALL.
Background:
I'm writing a package (RNetica) which
I already did, this morning; Bug 15118. I simply copied my original posting
+ refs to current discussion.
On Wed, Nov 28, 2012 at 3:22 PM, R. Michael Weylandt <
michael.weyla...@gmail.com> wrote:
> Should I file an issue for this in the bug tracker?
>
> Slighly rearranged discussion with repro
Hello,
I want to compile R-2.15.2 for Windows with Intel compilers and MKL(
BLAS, LAPACK).
I installed 'Rtools 2.16.0.1923' and follow the instructions of "R
installation and administration" guide (3.1; A.3.1.4; C.2.2).
I configured "/src/gnuwin32/MkRules.local" and "config.site" according
to nee
> replicate(1000, {dev.new(); dev.off()})
R(83204,0xacdc1a28) malloc: *** mmap(size=16777216) failed (error code=12)
*** error: can't allocate region
*** set a breakpoint in malloc_error_break to debug
R(83204,0xacdc1a28) malloc: *** mmap(size=16777216) failed (error code=12)
*** error: can't alloc
More on this. It looks to me like there is some kind of issue
specifically with the qr and qr.* functions in R CMD check, as my last
email suggests. Additionally, by changing the dispatch of the qr.*
functions from y to x (in this example), such as:
setGeneric(name="qr.Q",
function(x, ...)
When I went to report a (very minor) bug today, I noticed that under the
choices for Version, there was no entry for "R 2.15.2" nor "R 2.15.2
patched". I could not find a contact email for the bug tracker itself,
so I figured the next best place to send this was r-devel. Perhaps
adding new vers
Hi,
This was surprising to me and does not appear to be documented in
?str. After reading ?strwrap, I see that the problem is that
"Whitespace ... in the input is destroyed". However, I thought I'd
mention it because I'm not sure it is intended behavior for str().
I have a list, and the names o
Hi Martin, Malcolm,
Thanks Martin for applying the fix.
On 11/28/2012 05:47 AM, Cook, Malcolm wrote:
Yes, yes, excellent and great , I am tracking this development with great
interest.
Am I correct that the implications for BioConductor is the tearing out of the Xapply from
generics and the
On Nov 28, 2012, at 8:56 AM, Prof Brian Ripley wrote:
> On 28/11/2012 13:43, R. Michael Weylandt wrote:
>> On Wed, Nov 28, 2012 at 12:47 PM, Duncan Murdoch
>> wrote:
>>> On 12-11-28 7:39 AM, Ivan Calandra wrote:
Dear users,
I am looking for a function to choose a folder in
On 28/11/2012 14:36, sgerber wrote:
Hi
Is there a similar way to create a specific Makevars for OSX versus *NIX
systems as for Windows, e.g. a Makervars.osx ?
If not what is there another lean solution to create system specific
Makevars? I need to link differently depending on whether I am on *N
Hi
Is there a similar way to create a specific Makevars for OSX versus
*NIX systems as for Windows, e.g. a Makervars.osx ?
If not what is there another lean solution to create system specific
Makevars? I need to link differently depending on whether I am on *NIX
or OSX (specifically link to Op
On 28/11/2012 14:22, R. Michael Weylandt wrote:
Should I file an issue for this in the bug tracker?
Someone already has. (15118, against R 2.14.0!)
Slighly rearranged discussion with reproducible example follows on below.
Em 26-11-2012 21:39, R. Michael Weylandt escreveu:
On Mon, Nov 26,
Should I file an issue for this in the bug tracker?
Slighly rearranged discussion with reproducible example follows on below.
> Em 26-11-2012 21:39, R. Michael Weylandt escreveu:
>>
>> On Mon, Nov 26, 2012 at 2:41 PM, Ludo Pagie wrote:
>>> tbl.char1 <- table(c('a','a'))
>>> tbl.char2 <- table(c(
On 11/28/2012 6:02 AM, Martin Maechler wrote:
In any case, I support your suggestion (replacing ":::" by "::" !)
and would definitely volunteer to accept patches and then put such an
improvement into R.
Thanks, Martin.
If you can point me to the source where this is carried out, I can
attempt a
On 28/11/2012 13:43, R. Michael Weylandt wrote:
On Wed, Nov 28, 2012 at 12:47 PM, Duncan Murdoch
wrote:
On 12-11-28 7:39 AM, Ivan Calandra wrote:
Dear users,
I am looking for a function to choose a folder interactively, just like
file.choose() but for a folder.
"choose.dir()" does exist on
Yes, yes, excellent and great , I am tracking this development with great
interest.
Am I correct that the implications for BioConductor is the tearing out of the
Xapply from generics and the expecations that List and descendents would now
"just work" with {t,mc,mcl,...}apply? That would be a g
On Wed, Nov 28, 2012 at 12:47 PM, Duncan Murdoch
wrote:
> On 12-11-28 7:39 AM, Ivan Calandra wrote:
>>
>> Dear users,
>>
>> I am looking for a function to choose a folder interactively, just like
>> file.choose() but for a folder.
>>
> "choose.dir()" does exist on Windows, so you could switch to t
If it is of interest, I am using the gmail web interface, and the
problems seems to be that it sets the content type too correctly
rather than incorrectly.
In my original email, it had set the content type to "text/x-c++src".
I just did a test with a .csv file, and it set the content type to
"text
> "FB" == Florian Burkart
> on Tue, 27 Nov 2012 18:01:33 + writes:
FB> Sorry, didn't realize text attachments get stripped as well...
they are *NOT* stripped *if* they get the correct MIME type,
e.g. 'text/plain'
Unfortunately many e-mail clients nowadays no longer try put
> Michael Friendly
> on Tue, 27 Nov 2012 17:17:16 -0500 writes:
> [Env: R 2.15.1, Win Xp]
> Suggestion:
> Could the R script that checks for non-ASCII characters in R CMD check
> not give either:
> (a) a pointer to tools:::showNonASCIIfile, as in,
> try runnin
> Hervé Pagès
> on Tue, 27 Nov 2012 17:03:05 -0800 writes:
> Some formatting issues when copy/pasting the patch in the
> body of the email so I've attached the diff file.
Thank you, Hervé.
I have committed (a slightly simplified version of) your patch
to R-devel (to become 2
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