Re: [Rd] CRAN check error with no example?

2012-08-31 Thread Spencer Graves
On 8/31/2012 5:48 PM, Duncan Murdoch wrote: On 12-08-24 9:57 PM, Spencer Graves wrote: Hi, Henrik: Thanks. That suggests I should ignore this error message. That was my tentative plan, but I felt a need to mention it to this group before I did. Brian Ripley tracked this to a bug in

Re: [Rd] CRAN check error with no example?

2012-08-31 Thread Duncan Murdoch
On 12-08-24 9:57 PM, Spencer Graves wrote: Hi, Henrik: Thanks. That suggests I should ignore this error message. That was my tentative plan, but I felt a need to mention it to this group before I did. Brian Ripley tracked this to a bug in the parser, and I got a reproducible version

Re: [Rd] Arrays Partial unserialization

2012-08-31 Thread Jeff Ryan
There is no such tool to my knowledge, though the mmap package can do very similar things. In fact, it will be able to do this exactly once I apply a contributed patch to handle endianess. The issue is that rds files are compressed by default, so directly reading requires uncompressing, which mak

Re: [Rd] Arrays Partial unserialization

2012-08-31 Thread Prof Brian Ripley
On 31/08/2012 15:41, Duncan Murdoch wrote: On 31/08/2012 9:47 AM, Damien Georges wrote: Hi all, I'm working with some huge array in R and I need to load several ones to apply some functions that requires to have all my arrays values for each cell... To make it possible, I would like to load on

Re: [Rd] Arrays Partial unserialization

2012-08-31 Thread Gabriel Becker
I'm not an expert in its use, but I believe the bigmemory package offers the functionality you are looking for (or at least similar functionality that can be co-opted for your use-case). See the sub.big.matrix function. Depending on what you mean by "huge" it may offer other benefits as well. HTH,

Re: [Rd] Arrays Partial unserialization

2012-08-31 Thread Duncan Murdoch
On 31/08/2012 9:47 AM, Damien Georges wrote: Hi all, I'm working with some huge array in R and I need to load several ones to apply some functions that requires to have all my arrays values for each cell... To make it possible, I would like to load only a part (for example 100 cells) of all my

[Rd] Arrays Partial unserialization

2012-08-31 Thread Damien Georges
Hi all, I'm working with some huge array in R and I need to load several ones to apply some functions that requires to have all my arrays values for each cell... To make it possible, I would like to load only a part (for example 100 cells) of all my arrays, apply my function, delete all cell

Re: [Rd] include dll in R-package

2012-08-31 Thread Prof Brian Ripley
On 30/08/2012 16:59, LIYING HUANG wrote: One very simple question, probably not appropriate to post this to rdevel list, I put all Fortran files in src, when I do R CMD check, it tries to compile the files by alphabetical order. I tried to modify Makevar, but no luck after staring at the manual

Re: [Rd] include dll in R-package

2012-08-31 Thread LIYING HUANG
One very simple question, probably not appropriate to post this to rdevel list, I put all Fortran files in src, when I do R CMD check, it tries to compile the files by alphabetical order. I tried to modify Makevar, but no luck after staring at the manual for hours. It seems that I could use R CM