Ah yes, I found it now. I had the exact same setOldClass statement at the top
of 2 different R files. Having it in the first collated one solves my problem.
Original message
>Date: Tue, 19 Apr 2011 20:29:40 -0700
>From: Martin Morgan
>Subject: Re: [Rd] Package Name Not Found Warning
On 04/19/2011 08:00 PM, Dario Strbenac wrote:
Ah, I think it's happening because I have
setOldClass(AffymetrixCelSet) in my package.
if AffymetrixCelSet is from aroma.affymetrix, then the line above results in
> setOldClass(AffymetrixCelSet)
Error in x[length(x):1L] : object of type 'closure'
Ah, I think it's happening because I have
setOldClass(AffymetrixCelSet) in my package.
I guess I need to use there where argument. But how do I have this call outside
any S4 functions, but without having to load aroma.affymetrix when my package
loads ?
Original message
>Date: Tue, 1
On 04/19/2011 05:00 PM, Dario Strbenac wrote:
Hello,
I've got a DESCRIPTION file with a the first line:
Package: Repitools
But, when I run R CMD INSTALL Repitools I get:
* installing *source* package Repitools ...
** R
** data
** inst
** preparing package for lazy loading
Warning in FUN(X[[1L
Hello,
I've got a DESCRIPTION file with a the first line:
Package: Repitools
But, when I run R CMD INSTALL Repitools I get:
* installing *source* package Repitools ...
** R
** data
** inst
** preparing package for lazy loading
Warning in FUN(X[[1L]], ...) :
Created a package name, "2011-04-20
I'm trying to do the following:
> setClass("MyNode", representation(parent = "MyNode"))
[1] "MyNode"
Warning message:
undefined slot classes in definition of "MyNode": parent(class "MyNode")
I scanned the docs, but found nothing. The representation function has no
problem, it's the setClass func
When I re-use a code chunk in Sweave, together with keep.source=TRUE, I would
like to follow usual programming conventions in which the amount of white
space on the left indicates logical structure. It seems that one can't do
this in Sweave, or am I wrong?
for (i in ind) {
do such-and-such and
I have just committed some code to the rgl package on
https://r-forge.r-project.org/projects/rgl/ to allow rgl images to be
inserted into Sweave documents. (This is not in the CRAN version yet.)
It makes use of the custom graphics driver support added by Brian Ripley.
In R-devel (which will
Dear list,
I would like to suggest a small update the ?Distributions man page of the
stats package. The current version contains the following line.
The CRAN package \pkg{SuppDists} for additional distributions.
I think it would be better to put in this man page a link to the CRAN task
view on
The replies so far have helped me see the issues more clearly.
Further comments:
1. This issue started with a bug report from a user:
library(survival)
fform <- as.formula(Surv(time, status) ~ age)
myfun <- function(dform, ddata) {
predict(coxph(dform, data=ddata), newdata=ddata)
}
Gabor
>
> I'm intrigued. After such a blatantly wrong claim about a bug in
> R... what exactly are you claiming about Matlab here?
> That it implements (software) decimal arithmetic on top of the
> cpu-internal binary arithmetic ? probably rather not ...
>
Just for confirmation the same thing does
> salmajj
> on Mon, 18 Apr 2011 11:11:28 -0700 (PDT) writes:
> Thanks a lot Petr it works!!!
of course ..
> You know for someone who is used to work with matlab it is not so
obvious:)
well, what do you mean with that?
I'm intrigued. After such a blatantly wrong claim ab
On Apr 19, 2011, at 07:16 , Prof Brian Ripley wrote:
> On Mon, 18 Apr 2011, Duncan Murdoch wrote:
>
>> On 11-04-18 5:51 PM, Terry Therneau wrote:
>>> I've narrowed my scope problems with predict.coxph further.
>>> Here is a condensed example:
>>> fcall3<- as.formula("time ~ age")
>>> dfun3<- fun
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