Re: [Rd] Is it safe not to coerce matrices with as.double() in .C()?

2010-09-17 Thread Liaw, Andy
> From: Simon Urbanek > > On Sep 17, 2010, at 1:22 PM, Liaw, Andy wrote: > > > From: Liaw, Andy > >> > >> From: Prof Brian Ripley > >>> > >>> On Fri, 27 Aug 2010, peter dalgaard wrote: > >>> > > On Aug 27, 2010, at 2:44 PM, Liaw, Andy wrote: > > > I'd very much apprecia

Re: [Rd] Is it safe not to coerce matrices with as.double() in .C()?

2010-09-17 Thread Simon Urbanek
On Sep 17, 2010, at 1:22 PM, Liaw, Andy wrote: > From: Liaw, Andy >> >> From: Prof Brian Ripley >>> >>> On Fri, 27 Aug 2010, peter dalgaard wrote: >>> On Aug 27, 2010, at 2:44 PM, Liaw, Andy wrote: > I'd very much appreciate guidance on this. A user >>> reported that the

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Prof Brian Ripley
On Fri, 17 Sep 2010, Thomas Petzoldt wrote: On 17.09.2010 20:04, Prof Brian Ripley wrote: I'm not sure why end users would be using R-devel rather than R-alpha at this point, but I have already changed R-devel to allow Matrix to get updated before it fails. Yes I realized the update and succe

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Thomas Petzoldt
On 17.09.2010 20:04, Prof Brian Ripley wrote: I'm not sure why end users would be using R-devel rather than R-alpha at this point, but I have already changed R-devel to allow Matrix to get updated before it fails. Yes I realized the update and successfully recompiled it. Many thanks. "End user

Re: [Rd] some problems reported in 00check.log

2010-09-17 Thread carol white
Thank you for your reply. --- On Fri, 9/17/10, Uwe Ligges wrote: > From: Uwe Ligges > Subject: Re: [Rd] some problems reported in 00check.log > To: "carol white" > Cc: r-devel@r-project.org > Date: Friday, September 17, 2010, 10:45 AM > > regarding the point 3, Suppose I have a data set, da

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Prof Brian Ripley
On Fri, 17 Sep 2010, Spencer Graves wrote: Hi, Thomas: You use RODBC to connect to MySQL? Well, I do, and it is faster and more stable than RMySQL on all my platforms. However, I have no idea why this is thought to be the appropriate list. See R-sig-db ! For Windows, we need to kn

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Ted Byers
I encountered RMySQL issues recently, but ONLY when using 64 bit MySQL and 64 bit R 2.11.1 On my 32 bit machines, RMySQL works very well. On my 64 bit machine, when using the 64 bit distribution of MySQL, the 32 bit R is not able to load the DLLs from the 64 bit distribution of MySQL, and I can n

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Prof Brian Ripley
I'm not sure why end users would be using R-devel rather than R-alpha at this point, but I have already changed R-devel to allow Matrix to get updated before it fails. Warning: R-devel tends to be particularly unstable during the period when we are in alpha/beta/RC phases. On Sat, 18 Sep 201

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Thomas Petzoldt
On 17.09.2010 19:22, Uwe Ligges wrote: On 17.09.2010 16:04, Thomas Petzoldt wrote: Dear R-Devel, I've just tried to compile the fresh R-devel and found that the install of package Matrix failed: - ** help *** installing help indices ** building pac

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Uwe Ligges
On 17.09.2010 19:54, Berwin A Turlach wrote: G'day Uwe, On Fri, 17 Sep 2010 19:22:04 +0200 Uwe Ligges wrote: On 17.09.2010 16:04, Thomas Petzoldt wrote: Dear R-Devel, I've just tried to compile the fresh R-devel and found that the install of package Matrix failed: -

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Berwin A Turlach
G'day Uwe, On Fri, 17 Sep 2010 19:22:04 +0200 Uwe Ligges wrote: > > > On 17.09.2010 16:04, Thomas Petzoldt wrote: > > Dear R-Devel, > > > > I've just tried to compile the fresh R-devel and found that the > > install of package Matrix failed: > > > >

Re: [Rd] some problems reported in 00check.log

2010-09-17 Thread Uwe Ligges
On 17.09.2010 14:25, carol white wrote: Hi, 1- How is it possible to use the name of a generic function as the name of a function which is not related to the generic function? This is not possible, choose a different name or make it a predict() methods. > For example, if I define

Re: [Rd] Is it safe not to coerce matrices with as.double() in .C()?

2010-09-17 Thread Liaw, Andy
From: Liaw, Andy > > From: Prof Brian Ripley > > > > On Fri, 27 Aug 2010, peter dalgaard wrote: > > > > > > > > On Aug 27, 2010, at 2:44 PM, Liaw, Andy wrote: > > > > > >> I'd very much appreciate guidance on this. A user > > reported that the > > >> as.double() coercion used inside the .C() c

Re: [Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Uwe Ligges
On 17.09.2010 16:04, Thomas Petzoldt wrote: Dear R-Devel, I've just tried to compile the fresh R-devel and found that the install of package Matrix failed: - ** help *** installing help indices ** building package indices ... Error in require(Matrix

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Spencer Graves
Hi, Thomas: You use RODBC to connect to MySQL? Thanks, Spencer On 9/17/2010 9:26 AM, Thomas Etheber wrote: I also had problems connecting via RMysql on Windows several weeks ago. I decided to skip the package and now use RODBC, which runs stable out of the box. Perhaps you sho

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Spencer Graves
This is also discussed in "Creating R Packages, Using CRAN, R-Forge, And Local R Archive Networks And Subversion (SVN) Repositories ” by Spencer Graves and Sundar Dorai-Raj, available from CRAN -> contributed documentation "http://cran.fhcrc.org/doc/contrib/Graves+DoraiRaj-RPackageDevelopment.

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Thomas Etheber
I also had problems connecting via RMysql on Windows several weeks ago. I decided to skip the package and now use RODBC, which runs stable out of the box. Perhaps you should have a look at this package. Hth Thomas Am 17.09.2010 17:50, schrieb Spencer Graves: I've recently been through

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Janko Thyson
Thank you very much for the advice! Cheers, Janko > -Ursprüngliche Nachricht- > Von: Friedrich Leisch [mailto:friedrich.lei...@stat.uni-muenchen.de] > Gesendet: Freitag, 17. September 2010 16:39 > An: Janko Thyson > Cc: r-de...@r-project. org > Betreff: Re: [Rd] How to set up an own packa

Re: [Rd] How to connect R to Mysql?

2010-09-17 Thread Spencer Graves
I've recently been through that with some success. I don't remember all the details, but I first looked at "help(pac=RMySQL)". This told me that the maintainer was Jeffrey Horner. Google told me he was at Vanderbilt. Eventually I found "http://biostat.mc.vanderbilt.edu/wiki/Main/R

[Rd] How to connect R to Mysql?

2010-09-17 Thread Arijeet Mukherjee
I installed the RMySql package in R 2.11.1 64 bit Now how can I connect R with MySql? I am using a windows 7 64 bit version. Please help ASAP. -- Thanks & Regards Arijeet Mukherjee +91-8981598879 [[alternative HTML version deleted]] __ R-devel

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Ben Bolker
Janko Thyson ku-eichstaett.de> writes: > > Dear List, > > I'd like to set up a package repository so I can use install.packages() on > it for home-grown packages. I set up an AMPP infrastructure on a windows box > already, but I'm pretty lost with respect to what to do next as I didn't do > any

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Friedrich Leisch
> On Fri, 17 Sep 2010 12:16:47 +0200, > Janko Thyson (JT) wrote: > Dear List, > I'd like to set up a package repository so I can use install.packages() on > it for home-grown packages. I set up an AMPP infrastructure on a windows box > already, but I'm pretty lost with respect to w

Re: [Rd] How to set up an own package repository

2010-09-17 Thread Simon Urbanek
On Sep 17, 2010, at 6:16 AM, Janko Thyson wrote: > Dear List, > > > > I'd like to set up a package repository so I can use install.packages() on > it for home-grown packages. I set up an AMPP infrastructure on a windows box > already, but I'm pretty lost with respect to what to do next as I di

[Rd] Matrix install fails because of defunct save in require

2010-09-17 Thread Thomas Petzoldt
Dear R-Devel, I've just tried to compile the fresh R-devel and found that the install of package Matrix failed: - ** help *** installing help indices ** building package indices ... Error in require(Matrix, save = FALSE) : unused argument(s) (save

[Rd] some problems reported in 00check.log

2010-09-17 Thread carol white
Hi, 1- How is it possible to use the name of a generic function as the name of a function which is not related to the generic function? For example, if I define predict.my.function, R will relate it to predict function and I'll get the following warning when I run R CMD check * checking S3

Re: [Rd] a small suggestion for improving the building of packages

2010-09-17 Thread Janko Thyson
> -Ursprüngliche Nachricht- > Von: mark.braving...@csiro.au [mailto:mark.braving...@csiro.au] > Gesendet: Freitag, 17. September 2010 01:36 > An: kasperdanielhan...@gmail.com; kevin.r.coom...@gmail.com > Cc: janko.thy...@ku-eichstaett.de; r-devel@r-project.org > Betreff: RE: [Rd] a small su

[Rd] How to set up an own package repository

2010-09-17 Thread Janko Thyson
Dear List, I'd like to set up a package repository so I can use install.packages() on it for home-grown packages. I set up an AMPP infrastructure on a windows box already, but I'm pretty lost with respect to what to do next as I didn't do any web-programming/admin yet. Could anyone recommend so

Re: [Rd] Summary: package test failed on Solaris x86 ...

2010-09-17 Thread Thomas Petzoldt
Dear Martin, many thanks for your effort. Last night we found the same, thanks to the kind assistance from Bill Dunlap. The most important bugs are now already fixed, some minor things and an upload of a new version will follow soon. Many thanks for the quick and competent assistance to Bill