[Rd] Rmpi on CentOS

2010-03-02 Thread Patrick Connolly
After setting the LD_LIBRARY_PATH to use the OpenMPI libs, I now get a different error when I try to load Rmpi > require(Rmpi) > Loading required package: Rmpi librdmacm: couldn't read ABI version. librdm

[Rd] libgfortran misplaced in Mac OS X R install (PR#14226)

2010-03-02 Thread tbrick
Full_Name: Timothy Brick Version: 2.10 OS: Mac OS X (seen on both 10.6 and 10.5) Submission from: (NULL) (63.255.24.5) When using install.packages in R on Mac OS X, packages that require gfortran throws an error (Example below from installation of OpenMx package): Loading required package: OpenM

[Rd] Installation problem with 2.10 and Solaris 10 (PR#14227)

2010-03-02 Thread jnoble
Full_Name: John Noble Version: 2.10 OS: Solaris 10 SPARC Submission from: (NULL) (128.172.190.27) The make of Recommended fails. All sections of Make work up to this point and the compiled version of R appears to be correct. Only when adding the recommended modules does the problem appear.

[Rd] Rmpi on CentOS (64bit)

2010-03-02 Thread Patrick Connolly
I got Rmpi to compile with little difficulty, but had a tricky time setting the LD_LIBRARY_PATH to use the OpenMPI libs. I now get a different error when I try to load Rmpi > require(Rmpi) Loading required package: Rmpi librdmacm: couldn't read ABI version. librdmacm: assuming:

Re: [Rd] linking hdf5, requires setting LD_LIBRARY_PATH

2010-03-02 Thread James Bullard
On Mar 2, 2010, at 17:45, Dirk Eddelbuettel wrote: Unless I am missing something, this has nothing to do with hdf5 per se. See below. No, you are not missing anything. Thank you for the response. This is exactly what I was looking for. Thanks again, Jim On 2 March 2010 at 16:

Re: [Rd] linking hdf5, requires setting LD_LIBRARY_PATH

2010-03-02 Thread Dirk Eddelbuettel
Unless I am missing something, this has nothing to do with hdf5 per se. See below. On 2 March 2010 at 16:20, bull...@stat.berkeley.edu wrote: | I am writing an R package to interface to hdf5 files (yes I know one | exists, the issue will be demonstrated using that package). I tend to like | to bu

[Rd] linking hdf5, requires setting LD_LIBRARY_PATH

2010-03-02 Thread bullard
I am writing an R package to interface to hdf5 files (yes I know one exists, the issue will be demonstrated using that package). I tend to like to build/install things locally so that aspects of the system I am working on don't cause problems later when attempting to install elsewhere. To this end,

Re: [Rd] R logo as SVG ?

2010-03-02 Thread Jens Elkner
On Mon, Mar 01, 2010 at 10:16:16PM +0100, Peter Dalgaard wrote: > >Jens Elkner wrote: ... > >>BTW: screenshots I made from my desktop are available via > >>http://iws.cs.uni-magdeburg.de/~elkner/r/ ... > >Looks quite nice. I later realized that it would be a much better idea > >to start by tracing

Re: [Rd] Idea for install.packages on (certain) linux distributions

2010-03-02 Thread Dirk Eddelbuettel
On 2 March 2010 at 07:02, Dirk Eddelbuettel wrote: | To me, this is one of these "it would be really nice" ideas. Just like | nuclear fusion and those floating cars the Flintstones have. And I see about | the same ETA for all three of these. Marc Schwartz kindly reminded me off-list that I am n

Re: [Rd] Idea for install.packages on (certain) linux distributions

2010-03-02 Thread Dirk Eddelbuettel
On 2 March 2010 at 07:31, Prof. John C Nash wrote: | Some time ago, I had some email discussion with Dirk E. about putting a front-end on Allow me to really quickly correct the record here by stating that it was John N. who claimed this was a) desirable and b) possible. I can only agree on a)

[Rd] Idea for install.packages on (certain) linux distributions

2010-03-02 Thread Prof. John C Nash
Some time ago, I had some email discussion with Dirk E. about putting a front-end on install.packages to first look at the debian repositories for R and use them before trying to install from source. The code for this would not be very large. As Uwe points out in another posting, the issue then

Re: [Rd] R logo as SVG ?

2010-03-02 Thread G. Jay Kerns
On Mon, Mar 1, 2010 at 4:16 PM, Peter Dalgaard wrote: >> >> Looks quite nice. I later realized that it would be a much better idea to >> start by tracing the highest resolution bitmap from >> >> http://developer.r-project.org/Logo >> >> I now have a version that is only 48 K. It still needs a lit