Full_Name: Jelle Goeman
Version: 2.8.1
OS: Win XP
Submission from: (NULL) (87.212.67.197)
I get the following error message when I try to make a heatmap (package stats),
without the associated dendrograms.
X <- matrix(rnorm(200),20,10)
XX <- crossprod(X)
heatmap(XX, Rowv= NA, revC=TRUE)
Error in
> ... you need library(survival) in R code in tests/. It doesn't happen
> automatically like it does for examples.
Thanks Thomas, that is exactly the hint I needed. I had read the "check"
part
of the manual 3 times in vain; once you pointed it out I was able to fine the
answer in the ma
On Mon, 9 Feb 2009, Peter Dalgaard wrote:
Terry Therneau wrote:
There are some warnings earlier in the log about my .Rd files (missing a
description of weights and subset in a couple). The only message that I
don't completely understand is
* checking foreign function calls ... OK
* checking
On Mon, 9 Feb 2009, Terry Therneau wrote:
> tfit <- aareg(Surv(time, status) ~ x, test1)
Error: could not find function "aareg"
Execution halted
--
The manual page aareg.Rd has a call to the function in the examples and that
runs ok, and aareg is in the NAMESPACE exports.
I'm
Terry Therneau wrote:
> There are some warnings earlier in the log about my .Rd files (missing a
> description of weights and subset in a couple). The only message that I
> don't completely understand is
>
> * checking foreign function calls ... OK
> * checking R code for possible problems ... N
There are some warnings earlier in the log about my .Rd files (missing a
description of weights and subset in a couple). The only message that I
don't completely understand is
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Error in firstlib(which.lib.lo
I am getting an error that I don't understand from R CMD check on my current
instance of the survival code. R2.7.1 on Linux. Here is the last of the
log
* checking line endings in Makefiles ... OK
* checking for portable use of $BLAS_LIBS ... OK
* creating survival-Ex.R ... OK
* checking exampl
On 09/02/2009 4:05 AM, Christophe Genolini wrote:
Thanks, that was a stupid mistake (I did not know that this is so
important).
So I still have a problem realy more complex and I do not know was is
wrong. I am running a .C procedure in a R loop.
After 4, 5 or sometimes 6 call to the C procedur
You might have a look at the "Writing R Extensions" manual - especially
valgrind and/or gdb.
By the way, your error is probably due to array size problem - i.e. tmp
is of size n and you call tmp[n+1] for example. Valgrind will detect in
automagically for you.
Best,
Mathieu
Le lundi 09 février 20
> "SpG" == Spencer Graves
> on Mon, 02 Feb 2009 12:42:52 -0800 writes:
SpG> Hello, All: What would you say is the best succinct
SpG> reference to cite on use of generic functions,
SpG> especially S3 generics?
In a very strict sense, S3 generics don't exist;
S4 ones do.
L
Thanks, that was a stupid mistake (I did not know that this is so
important).
So I still have a problem realy more complex and I do not know was is
wrong. I am running a .C procedure in a R loop.
After 4, 5 or sometimes 6 call to the C procedure, Rgui crash (it closes
asking me if I want to se
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