[Rd] [OT] StatET Roxygen support (was: Re: why is \alias{anRpackage} not mandatory?)

2008-10-07 Thread Tobias Verbeke
Hi Hadley, I'd be happy to help, especially with my experience writing rdoc with R and with ruby. I also have a couple of packages in development that currently don't have any documentation, where I'd be happy to experiment with new ways of doing documentation (I'm currently planning on tryin

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Duncan Temple Lang
FWIW, I'll note that one or two of us are working on a documentation system that uses XML and specifically extensions of Docbook to create documentation for R objects and that transparently extends to general articles, vignettes, books, etc. and dynamic and interactive reproducible documents.

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread hadley wickham
> I don't agree with this. Back in 2001 when this was first proposed it might > have worked, but there's far too much inertia now to make a big change. > Weren't you the one who objected to a requirement for a foo-package help > topic? How would you like to rewrite all the help files for all of

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Robert Gentleman
Hi, Not that I have time, but I suspect that there are not that many ways to document a package, probably only five or six variants in the wild and an overview function, with a name like packageOverview, would be relatively easy to write and would be able to extract all available information

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Duncan Murdoch
On 07/10/2008 10:17 AM, hadley wickham wrote: This shows up in the HTML help system. It would be better if it showed up in all help formats, but there are other ways to do that, e.g. creating an Rd help page pointing to those files. Or you can just link to them from your website. I don't thin

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread hadley wickham
> This shows up in the HTML help system. It would be better if it showed up > in all help formats, but there are other ways to do that, e.g. creating an > Rd help page pointing to those files. Or you can just link to them from your website. I don't think you'd argue with the statement that there

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Gabor Grothendieck
On Tue, Oct 7, 2008 at 9:46 AM, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > On 07/10/2008 9:11 AM, Gabor Grothendieck wrote: >> >> Some examples are: >> - be able to use brew package or similar alternative in place of Sweave >> - provide a pdf regardless how it was generated >> without ugly workaro

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Duncan Murdoch
On 07/10/2008 9:11 AM, Gabor Grothendieck wrote: Some examples are: - be able to use brew package or similar alternative in place of Sweave - provide a pdf regardless how it was generated without ugly workarounds and still let the user get a list of all pdf documents in one place, e.g. library(

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Gabor Grothendieck
Some examples are: - be able to use brew package or similar alternative in place of Sweave - provide a pdf regardless how it was generated without ugly workarounds and still let the user get a list of all pdf documents in one place, e.g. library(help = mypackage) should list the vignettes and oth

Re: [Rd] why is \alias{anRpackage} not mandatory?

2008-10-07 Thread Berwin A Turlach
G'day Hadley, On Mon, 6 Oct 2008 08:55:14 -0500 "hadley wickham" <[EMAIL PROTECTED]> wrote: > >> The main problem with vignettes at the moment is that > >> they must be sweave, a format which I don't really like. I wish I > >> could supply my own pdf + R code file produced using whatever > >> to

Re: [Rd] splinefun gives incorrect derivs when extrapolating to the (PR#13139)

2008-10-07 Thread berwin
--MP_/kvy20nVajVG/n.8m=_ZjLAX Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Content-Disposition: inline On Tue, 7 Oct 2008 19:31:03 +0800 Berwin A Turlach <[EMAIL PROTECTED]> wrote: > The attached patch (against the current SVN version of R) implements > the latter st

Re: [Rd] splinefun gives incorrect derivs when extrapolating to the left (PR#13132)

2008-10-07 Thread Berwin A Turlach
On Tue, 7 Oct 2008 19:31:03 +0800 Berwin A Turlach <[EMAIL PROTECTED]> wrote: > The attached patch (against the current SVN version of R) implements > the latter strategy. With this patch applied, "make check > FORCE=FORCE" passes on my machine. The version of R that is build > seems to give the

Re: [Rd] splinefun gives incorrect derivs when extrapolating to the (PR#13138)

2008-10-07 Thread berwin
--MP_/Rxf/JAvsQx5JLkhZFc9Jmn4 Content-Type: text/plain; charset=US-ASCII Content-Transfer-Encoding: 7bit Content-Disposition: inline G'day Greg, On Mon, 6 Oct 2008 19:50:13 +0200 (CEST) [EMAIL PROTECTED] wrote: > This is a low priority bug that has been around for a while, but I > came across i

Re: [Rd] splinefun gives incorrect derivs when extrapolating to the left (PR#13132)

2008-10-07 Thread Berwin A Turlach
G'day Greg, On Mon, 6 Oct 2008 19:50:13 +0200 (CEST) [EMAIL PROTECTED] wrote: > This is a low priority bug that has been around for a while, but I > came across it again while alpha testing 2.8. Indeed, that bug must have been around since splinefun was changed to return a function with a deriv

Re: [Rd] Lapack: SSYEV routine

2008-10-07 Thread Prof Brian Ripley
On Tue, 7 Oct 2008, Nolwenn Le Meur wrote: Hi everyone, I am interested in using the SSYEV Lapack subroutine in a R package. Unfortunately I am not familiar with the all Lapack library and I was wondering why the routine SSYEV is not part of the R-LAPACK interface module. Because it is a si

[Rd] Lapack: SSYEV routine

2008-10-07 Thread Nolwenn Le Meur
Hi everyone, I am interested in using the SSYEV Lapack subroutine in a R package. Unfortunately I am not familiar with the all Lapack library and I was wondering why the routine SSYEV is not part of the R-LAPACK interface module. Is there any plan to extend the R-Lapack module in the next R

[Rd] LinkingTo on Windows

2008-10-07 Thread Thomas Baier
Dear List, R packages may specify a "LinkingTo" attribute to specify dependencies to the source code (mainly the header files) of other packages. Unfortunately, it is not possible to also have a reference to the generated library (.dll on Windows) of the other package. So including a header file