Re: [Rd] Rsquared bug lm() (PR#10516)

2007-12-14 Thread Thomas Lumley
This is deliberate and as documented in ?summary.lm. It is not a bug. -thomas On Fri, 14 Dec 2007 [EMAIL PROTECTED] wrote: > Full_Name: lieven clement > Version: R version 2.4.0 Patched (2006-11-25 r39997) > OS: i486-pc-linux-gnu > Submission from: (NULL) (157.193.193.180) > > > summary.l

[Rd] Improvement of SignRank functions

2007-12-14 Thread Ivo Ugrina
I took some time and liberty and tried to improve existing implementation of SignRank functions in R. (dsignrank, ...) As I have seen they've been based on csignrank. So I modified csignrank and, I believe, improved calculation time and memory efficiency. The idea is basically the same. I use th

Re: [Rd] Wrong length of POSIXt vectors (PR#10507)

2007-12-14 Thread Tony Plate
Duncan Murdoch wrote: > On 12/13/2007 1:59 PM, Tony Plate wrote: >> Duncan Murdoch wrote: >>> On 12/11/2007 6:20 AM, [EMAIL PROTECTED] wrote: Full_Name: Petr Simecek Version: 2.5.1, 2.6.1 OS: Windows XP Submission from: (NULL) (195.113.231.2) Several times I have

Re: [Rd] Rapid Random Access

2007-12-14 Thread Barry Rowlingson
Tony Plate wrote: > This is exactly the type of situation that the trackObjs package is > designed for. Ooh, I'm having deja-vu - yes I think I saw this package a while back and wondered what magic it did. I shall go play with it later. Thanks Barry ___

Re: [Rd] Rapid Random Access

2007-12-14 Thread Tony Plate
Barry Rowlingson wrote: > I have some code that can potentially produce a huge number of > large-ish R data frames, each of a different number of rows. All the > data frames together will be way too big to keep in R's memory, but > we'll assume a single one is manageable. It's just when there'

[Rd] segfault isoreg with NAs

2007-12-14 Thread Tobias Verbeke
Dear list, As can be seen below, adding a NA to the y values in a call to isoreg results in a segfault. ir4 <- isoreg(1:10, y4 <- c(5, 9, 1:2, 5:8, NA, 8)) Adding missing values to the x values, on the contrary, gives an error, but maybe the error message could be tailored to this particular sit

Re: [Rd] Rapid Random Access

2007-12-14 Thread Sean Davis
On Dec 14, 2007 1:01 PM, Barry Rowlingson <[EMAIL PROTECTED]> wrote: > I have some code that can potentially produce a huge number of > large-ish R data frames, each of a different number of rows. All the > data frames together will be way too big to keep in R's memory, but > we'll assume a singl

[Rd] Rapid Random Access

2007-12-14 Thread Barry Rowlingson
I have some code that can potentially produce a huge number of large-ish R data frames, each of a different number of rows. All the data frames together will be way too big to keep in R's memory, but we'll assume a single one is manageable. It's just when there's a million of them that the ma

[Rd] Do not misuse R-devel {was "Quadratic Programming"}

2007-12-14 Thread Martin Maechler
Please use the R-help mailing for such *Questions*. R-devel has a very different purpose. Probably you should also read the posting guide, --> http://www.r-project.org/posting-guide.html Regards, Martin Maechler, ETH Zurich > "dGdVS" == de Gosson de Varennes Serge (4100) <[EMAIL PROTECTED]>

Re: [Rd] windows rtools missing gfortran.exe?

2007-12-14 Thread Duncan Murdoch
On 12/14/2007 10:23 AM, Hiroyuki Kawakatsu wrote: > Hi, > > I replaced my Rtools today as posted at > http://www.murdoch-sutherland.com/Rtools/Rtools.exe > > Trying to build R-devel_2007-12-13.tar.gz without modifying MkRules > gives the gfortran command not found error below. I am wondering if >

[Rd] windows rtools missing gfortran.exe?

2007-12-14 Thread Hiroyuki Kawakatsu
Hi, I replaced my Rtools today as posted at http://www.murdoch-sutherland.com/Rtools/Rtools.exe Trying to build R-devel_2007-12-13.tar.gz without modifying MkRules gives the gfortran command not found error below. I am wondering if gfortran.exe is missing from (recent?) Rtools.exe or I am doing s

Re: [Rd] End of whiskers of boxplots are repeated on PDF device (PR#10499)

2007-12-14 Thread Martin Maechler
> "MT" == Michael Toews <[EMAIL PROTECTED]> > on Thu, 13 Dec 2007 09:00:37 -0800 writes: MT> I've identified the problem for this issue, which is MT> simple to fix. Please see and apply the attached MT> patch. Thanks. +mt Excellent, Michael! This will be fixed in R-patc

Re: [Rd] Rsquared bug lm() (PR#10516)

2007-12-14 Thread Duncan Murdoch
On 12/14/2007 8:10 AM, [EMAIL PROTECTED] wrote: > Full_Name: lieven clement > Version: R version 2.4.0 Patched (2006-11-25 r39997) > OS: i486-pc-linux-gnu > Submission from: (NULL) (157.193.193.180) > > > summary.lm() does not calculate R² accurately for models without intercepts > if > one of

Re: [Rd] Minor documentation bug in R-exts (PR#10515)

2007-12-14 Thread Duncan Murdoch
On 12/13/2007 1:15 PM, [EMAIL PROTECTED] wrote: > This is a minor documentation bug. In the document: Writing R > Extensions (R-exts) section 1.6.5 (Summary -- converting an existing > package) the 3rd bullet is missing the end of the sentence. Thanks, I'll fix it. Duncan Murdoch

[Rd] Rsquared bug lm() (PR#10516)

2007-12-14 Thread lieven . clement
Full_Name: lieven clement Version: R version 2.4.0 Patched (2006-11-25 r39997) OS: i486-pc-linux-gnu Submission from: (NULL) (157.193.193.180) summary.lm() does not calculate R² accurately for models without intercepts if one of the predictor variables is a factor. In order to avoid one of the

[Rd] Minor documentation bug in R-exts (PR#10515)

2007-12-14 Thread Greg . Snow
This is a minor documentation bug. In the document: Writing R Extensions (R-exts) section 1.6.5 (Summary -- converting an existing package) the 3rd bullet is missing the end of the sentence. Thanks, --please do not edit the information below-- Version: platform =3D i386-pc-mingw32 arch =3D

[Rd] Quadratic Programming

2007-12-14 Thread de Gosson de Varennes Serge (4100)
Hi all! I have a little question concerning quadprog. To make it simple I'll start by stating the problem: I want to minimize h(d,delta)=0.5d^T B d +nabla(f(x))^T d +rho*delta^2 With respect to d\in R^n and delta \in R. I obviously have constraints (depending on both d and de