Re: [Rd] R CMD SHLIB error using OS X

2007-06-12 Thread stefano iacus
please report to R-sig-mac stefano On 08/giu/07, at 06:29, Richard Zur wrote: > Hello, > > I'm using R 2.5.0 with OS X 10.4.9 and Xcode 2.4.1 on a PowerPC. My > code used to compile fine with R 2.4.* and Xcode 2.2 (I think). > > I'm compiling some C code (named mhroc_prop.c) that calls a fortran

[Rd] PATCH: install inst/ before doing lazyload on Windows

2007-06-12 Thread Seth Falcon
Hi, On Windows, package files in the inst/ subdir are installed after the lazyload creation. This differs from Linux where inst/ is installed _before_ lazyload creation. Since packages may need data in inst, I think the order on Windows should be changed. Perhaps like this: diff --git a/src/gn

Re: [Rd] Warning under R 2.6.0: Rd files with unknown encoding

2007-06-12 Thread Prof Brian Ripley
These can be hard to spot. My technique (which in fact I did not need here) is to use 'less' in a C locale, as that does things like (s_{ij} - c_{ij})/[(c_{ii}c_{jj} - c_{ij})/N]^{1/2}} with in reverse video so it is hard to miss. Brian On Tue, 12 Jun 2007, John Fox wrote: Dear Brian,

Re: [Rd] Warning under R 2.6.0: Rd files with unknown encoding

2007-06-12 Thread Peter Dalgaard
John Fox wrote: > Dear Brian, > > >> -Original Message- >> From: Prof Brian Ripley [mailto:[EMAIL PROTECTED] >> Sent: Tuesday, June 12, 2007 7:45 AM >> To: John Fox >> Cc: r-devel@r-project.org >> Subject: Re: [Rd] Warning under R 2.6.0: Rd files with >> unknown encoding >> >> On Tue,

Re: [Rd] small typo in NEWS

2007-06-12 Thread Martin Maechler
> "BB" == Ben Bolker <[EMAIL PROTECTED]> > on Tue, 12 Jun 2007 13:31:21 + (UTC) writes: BB> The current NEWS file on the R site states that there is BB> a new relink (sic) function, which should probably be BB> relist ... Yes, thanks; being fixed "as we speak" ;-) Mar

Re: [Rd] bug in R environments? Was: [BioC] 'recursive default argument' error...

2007-06-12 Thread Seth Falcon
Prof Brian Ripley <[EMAIL PROTECTED]> writes: > On Tue, 12 Jun 2007, Oleg Sklyar wrote: > >> Dear developers, >> >> has anyone experienced the problem described below? Is it a bug in >> handling interrupts in R? > > I am not sure where you think the 'bug' is in: cf your subject line. > My guess is

Re: [Rd] Warning under R 2.6.0: Rd files with unknown encoding

2007-06-12 Thread John Fox
Dear Brian, > -Original Message- > From: Prof Brian Ripley [mailto:[EMAIL PROTECTED] > Sent: Tuesday, June 12, 2007 7:45 AM > To: John Fox > Cc: r-devel@r-project.org > Subject: Re: [Rd] Warning under R 2.6.0: Rd files with > unknown encoding > > On Tue, 12 Jun 2007, John Fox wrote: >

[Rd] small typo in NEWS

2007-06-12 Thread Ben Bolker
The current NEWS file on the R site states that there is a new relink (sic) function, which should probably be relist ... Ben Bolker __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Warning under R 2.6.0: Rd files with unknown encoding

2007-06-12 Thread Prof Brian Ripley
On Tue, 12 Jun 2007, John Fox wrote: Dear R-devel list members, Under the development version of R (2.6.0), I notice that my sem package produces the following warning: checking Rd files ... WARNING Rd files with unknown encoding: residuals.Rd I wonder what the warning

[Rd] Warning under R 2.6.0: Rd files with unknown encoding

2007-06-12 Thread John Fox
Dear R-devel list members, Under the development version of R (2.6.0), I notice that my sem package produces the following warning: checking Rd files ... WARNING Rd files with unknown encoding: residuals.Rd I wonder what the warning means. As far as I can see, residuals.R

Re: [Rd] bug in R environments? Was: [BioC] 'recursive default argument' error...

2007-06-12 Thread Prof Brian Ripley
On Tue, 12 Jun 2007, Oleg Sklyar wrote: > Dear developers, > > has anyone experienced the problem described below? Is it a bug in > handling interrupts in R? I am not sure where you think the 'bug' is in: cf your subject line. My guess is that the package is using environments in a vulnerable way

Re: [Rd] package check note: no visible global function definition (in functions using Tcl/Tk)

2007-06-12 Thread Jari Oksanen
On Tue, 2007-06-12 at 00:42 +0200, Henrik Bengtsson wrote: > On 6/11/07, Seth Falcon <[EMAIL PROTECTED]> wrote: > > Prof Brian Ripley <[EMAIL PROTECTED]> writes: > > > > > It seems that is happens if package tcltk is missing from the Depends: > > > list in the DESCRIPTION file. I just tested with

Re: [Rd] compiler usage after successful UNIX build

2007-06-12 Thread Prof Brian Ripley
On Mon, 11 Jun 2007, Louisell, Paul wrote: > Hi, > > I believe my question is pretty simple, but I'd like to give you brief > background first: > > I work at a company with UNIX installed on a sparc-sun-solaris platform; > the OS version is SunOS 5.9. Several of us who work here have been > advoca

[Rd] bug in R environments? Was: [BioC] 'recursive default argument' error...

2007-06-12 Thread Oleg Sklyar
Dear developers, has anyone experienced the problem described below? Is it a bug in handling interrupts in R? Best, Oleg Original Message Subject: Re: [BioC] 'recursive default argument' error in GOENTREZID2GO From: Diego Diez <[EMAIL PROTECTED]> ...steps that use to reach me

[Rd] compiler usage after successful UNIX build

2007-06-12 Thread Louisell, Paul
Hi, I believe my question is pretty simple, but I'd like to give you brief background first: I work at a company with UNIX installed on a sparc-sun-solaris platform; the OS version is SunOS 5.9. Several of us who work here have been advocating for the installation of R on this server. The IT secu