Re: [Rd] Qt device update

2007-05-03 Thread Prof Brian Ripley
On Thu, 3 May 2007, Deepayan Sarkar wrote: > Hi, > > a few days back I had asked for help on a Qt device package. Thanks to > hints from Duncan TL and Thomas Friedrichsmeier, I now have something > more or less functional. For those interested, It can be downloaded > from > > http://dsarkar.fhcrc.

[Rd] Qt device update

2007-05-03 Thread Deepayan Sarkar
Hi, a few days back I had asked for help on a Qt device package. Thanks to hints from Duncan TL and Thomas Friedrichsmeier, I now have something more or less functional. For those interested, It can be downloaded from http://dsarkar.fhcrc.org/R/R-Qt.html I have a couple of related questions. Fir

Re: [Rd] Inherited S4 .Data prototype not assigned

2007-05-03 Thread Oleg Sklyar
Martin, thanks for commenting on the issue. I did not know if this was a "feature" and therefore did not post before, but: in EBImage, BioC, the class Image is derived from array and since recently (R2.5) I had a problem with the following constructor: new("Image", .Data=data). Finally I had to

[Rd] Imports/exports of S4 methods

2007-05-03 Thread Roger D. Peng
I have a question about what to do in the following situation (please bear with the setup): Package A defines an S4 generic 'foo' and as well as S4 methods for 'foo' and has exportMethods("foo") in its NAMESPACE file. Package B defines another method for 'foo' for class "bar" and has importF

Re: [Rd] (PR#9623) qr.coef: permutes dimnames; inserts NA; promises

2007-05-03 Thread brech
> From: Prof Brian Ripley <[EMAIL PROTECTED]> > Date: Tue, 1 May 2007 15:01:51 +0100 (BST) > > On Thu, 19 Apr 2007, [EMAIL PROTECTED] wrote: > > > Full_Name: Christian Brechbuehler > > Version: 2.4.1 Patched (2007-03-25 r40917) > > OS: Linux 2.6.15-27-adm64-xeon; Ubuntu 6.06.1 LTS > > Submission

[Rd] Inherited S4 .Data prototype not assigned

2007-05-03 Thread Martin Morgan
An S4 class inheriting from another class with a prototype does not inherit (at least sometimes) the prototype for .Data: > setClass("A", "numeric", 1) > setClass("B", "A") > new("A") An object of class "A" [1] 1 > new("B") An object of class "B" numeric(0) My expectation is that prototype inheri

Re: [Rd] R CMD Rdconv drops sections: arguments, seealso, examples (PR#9649)

2007-05-03 Thread Prof Brian Ripley
Bill, Now we have access again to the R-bugs repository (the database has been offline for about a week) I can try to understand this. This is a follow up to PR#9645 which was itself a follow up to PR#9606, which was a report that Rdconv silently drops sections it makes no sense of. (The latt

Re: [Rd] ? R 2.5.0 alpha bug

2007-05-03 Thread Prof Brian Ripley
Why are you resending this? You sent it to R-help (https://stat.ethz.ch/pipermail/r-help/2007-May/130986.html) and got a reply. On Tue, 1 May 2007, Inman, Brant A. M.D. wrote: > This email is intended to highlight 2 problems that I encountered > running R 2.5.0 alpha on a Windows XP machine.

[Rd] ? R 2.5.0 alpha bug

2007-05-03 Thread Inman, Brant A. M.D.
This email is intended to highlight 2 problems that I encountered running R 2.5.0 alpha on a Windows XP machine. #1 - Open script error If I click the "Open folder" icon on the toolbar, R opens my script files perfectly. However, when I select "File > Open Script > MyFileLocation", I get a fata