Re: [Rd] Memory allocator on OS/X

2006-05-19 Thread Jason Foster
> Somehow you managed to miss it, we had a discussion about this > quite recently: > http://www.mail-archive.com/r-sig-mac%40stat.math.ethz.ch/ > msg00770.html My bad; I focused on the r-devel list and didn't check the SIG. Sorry about the noise. Jason _

Re: [Rd] Memory allocator on OS/X

2006-05-19 Thread Simon Urbanek
Jason, On May 19, 2006, at 6:37 PM, Jason Foster wrote: > A quick scan though the mailing list archives didn't reveal any > reference to this article Somehow you managed to miss it, we had a discussion about this quite recently: http://www.mail-archive.com/r-sig-mac%40stat.math.ethz.ch/msg00

[Rd] Memory allocator on OS/X

2006-05-19 Thread Jason Foster
A quick scan though the mailing list archives didn't reveal any reference to this article, so here goes: http://ridiculousfish.com/blog/archives/2006/05/16/36/ In response to a criticism of OS X, a diligent blogger examined a claim that it was an inherently slow operating system. The ap

[Rd] PR#8822

2006-05-19 Thread Dan . Kelley
Below my signature is an illustration of how I fixed this bug. (First, of course, I renamed the "R" file to "R-orig".) Dan E. Kelley, Assoc. Prof. phone:(902)494-1694 Dept. Oceanography fax:(902)494-2885 Dalhousie Universityma

[Rd] Innovative Enterprise Microarray Software

2006-05-19 Thread eNews
3rd Millennium is announcing the release of its award winning Array Repository and Data Analysis System (ARDAS) version 2. ARDAS is a web-enabled enterprise software system that provides a complete and fully integrated solution to microarray data acquisition, management, and analysis. ARDAS in

[Rd] Innovative Enterprise Microarray Software

2006-05-19 Thread eNews
3rd Millennium is announcing the release of its award winning Array Repository and Data Analysis System (ARDAS) version 2. ARDAS is a web-enabled enterprise software system that provides a complete and fully integrated solution to microarray data acquisition, management, and analysis. ARDAS in

Re: [Rd] Possible issue with make install (PR#8883)

2006-05-19 Thread mschwartz
On Fri, 2006-05-19 at 22:44 +0200, [EMAIL PROTECTED] wrote: > Full_Name: Stanley Hornyak > Version: 2.3.0 > OS: Solaris 9 > Submission from: (NULL) (128.231.93.143) > > > # make install > installing doc ... > installing doc/html ... > installing doc/html/search ... > installing doc/manual ... > i

[Rd] Possible issue with make install (PR#8883)

2006-05-19 Thread hornyaks
Full_Name: Stanley Hornyak Version: 2.3.0 OS: Solaris 9 Submission from: (NULL) (128.231.93.143) # make install installing doc ... installing doc/html ... installing doc/html/search ... installing doc/manual ... installing etc ... bash: -c: line 1: syntax error near unexpected token `;' *** Error

Re: [Rd] S4 classes and C

2006-05-19 Thread Ross Boylan
On Fri, 2006-05-19 at 11:46 +0200, Martin Maechler wrote: > > "Seth" == Seth Falcon <[EMAIL PROTECTED]> > > on Thu, 18 May 2006 12:22:36 -0700 writes: > > Seth> Ross Boylan <[EMAIL PROTECTED]> writes: > >> Is there any good source of information on how S4 classes (and methods)

[Rd] I: L.D.L (PR#8881)

2006-05-19 Thread willylotto
--=_Part_64172_20357219.1148055774494 Content-Type: message/rfc822 Message-ID: <[EMAIL PROTECTED]> Date: Fri, 19 May 2006 15:57:34 +0100 (GMT+01:00) From: <[EMAIL PROTECTED]> Reply-To: <[EMAIL PROTECTED]> Subject: L.D.L Mime-Version: 1.0 Content-Type: text/plain;charset="UTF-8" Content-Trans

Re: [Rd] helping out

2006-05-19 Thread Kevin B. Hendricks
Hi, I have built my own tuned atlas libs enabling multiple processors and pthread support. Then based on the note on page 23 of the "R Installation and Administration" manual, I added --disable-R- profiling to the configuration options Unfortunately, the code in R/src/main/eval.c [updated f

Re: [Rd] helping out

2006-05-19 Thread Peter Dalgaard
Prof Brian Ripley <[EMAIL PROTECTED]> writes: > R-bugs tends to mangle attachments (or perhaps not unmangle what a mailer > has done to them), inline patches get mangled (wrapped, tabs expanded) and > attachments get stripped (even though some are allowed). This happens in the remailing step. I

[Rd] UseMethod infelicity

2006-05-19 Thread Prof Brian Ripley
If I do > example(lm) ... > mycoef <- function(object, ...) UseMethod("coef", object) > mycoef(lm.D9) Error in mycoef(lm.D9) : no applicable method for "coef" which is pretty surprising, as coef has a default method. After a bit of digging, this comes from do_usemethod having defenv = e

Re: [Rd] delayedAssign and interrupts

2006-05-19 Thread Roger D. Peng
Luke Tierney wrote: > On Fri, 19 May 2006, Duncan Murdoch wrote: > >> On 5/19/2006 9:54 AM, Roger D. Peng wrote: >>> I noticed something recently that I thought was odd: >>> >>> delayedAssign("x", { Sys.sleep(5); 1 }) >>> x ## Hit Ctrl-C within the first second or 2 >>> >>> gives me: >>> >>> >

Re: [Rd] delayedAssign and interrupts

2006-05-19 Thread Duncan Murdoch
On 5/19/2006 10:37 AM, Luke Tierney wrote: > On Fri, 19 May 2006, Duncan Murdoch wrote: > >> On 5/19/2006 9:54 AM, Roger D. Peng wrote: >>> I noticed something recently that I thought was odd: >>> >>> delayedAssign("x", { Sys.sleep(5); 1 }) >>> x ## Hit Ctrl-C within the first second or 2 >>> >>>

Re: [Rd] delayedAssign and interrupts

2006-05-19 Thread Duncan Murdoch
On 5/19/2006 9:54 AM, Roger D. Peng wrote: > I noticed something recently that I thought was odd: > > delayedAssign("x", { Sys.sleep(5); 1 }) > x ## Hit Ctrl-C within the first second or 2 > > gives me: > > > delayedAssign("x", { Sys.sleep(5); 1 }) > > x ## Hit Ctrl-C within the first second

Re: [Rd] delayedAssign and interrupts

2006-05-19 Thread Luke Tierney
On Fri, 19 May 2006, Duncan Murdoch wrote: > On 5/19/2006 9:54 AM, Roger D. Peng wrote: >> I noticed something recently that I thought was odd: >> >> delayedAssign("x", { Sys.sleep(5); 1 }) >> x ## Hit Ctrl-C within the first second or 2 >> >> gives me: >> >> > delayedAssign("x", { Sys.sleep(5);

Re: [Rd] helping out

2006-05-19 Thread Prof Brian Ripley
On Thu, 18 May 2006, Thomas Lumley wrote: > On Thu, 18 May 2006, Kevin B. Hendricks wrote: >> >> I found this mailing list by accident looking for something to tell >> me about the NULL environment issue that hit me when I moved from >> version 2.2.1 to version 2.3.0. If there is a developers pag

Re: [Rd] delayedAssign and interrupts

2006-05-19 Thread Duncan Murdoch
On 5/19/2006 9:54 AM, Roger D. Peng wrote: > I noticed something recently that I thought was odd: > > delayedAssign("x", { Sys.sleep(5); 1 }) > x ## Hit Ctrl-C within the first second or 2 > > gives me: > > > delayedAssign("x", { Sys.sleep(5); 1 }) > > x ## Hit Ctrl-C within the first second

[Rd] delayedAssign and interrupts

2006-05-19 Thread Roger D. Peng
I noticed something recently that I thought was odd: delayedAssign("x", { Sys.sleep(5); 1 }) x ## Hit Ctrl-C within the first second or 2 gives me: > delayedAssign("x", { Sys.sleep(5); 1 }) > x ## Hit Ctrl-C within the first second or two > x Error: recursive default argument reference >

[Rd] ?attr: wrong parameter name (PR#8880)

2006-05-19 Thread prechelt
Full_Name: Lutz Prechelt Version: 2.2.1 OS: WinXP Submission from: (NULL) (130.133.8.114) ?attr declares base:attr as attr(x, which) attr(x, which) <- value The following text under "Value", however, says: The first form first looks for an exact match to 'code' amongst the at

Re: [Rd] Non-ASCII chars in R code

2006-05-19 Thread Prof Brian Ripley
A little more digging revealed a Unix/Windows discrepancy here. On Unix, saving images and preparing for lazyloading/lazydata is done with LC_ALL=C: on Windows with LC_COLLATE=C. I will change Windows to match. Unfortunately how the C locale is implemented is OS-dependent. Strictly it should

Re: [Rd] S4 classes and C

2006-05-19 Thread Martin Maechler
> "Seth" == Seth Falcon <[EMAIL PROTECTED]> > on Thu, 18 May 2006 12:22:36 -0700 writes: Seth> Ross Boylan <[EMAIL PROTECTED]> writes: >> Is there any good source of information on how S4 classes (and methods) >> work from C? Hmm, yes; there's nothing in the "Writing R Ext