[Rd] optim warning message. (PR#8186)

2005-10-07 Thread KKIII
Full_Name: Ken Kelley Version: 2.1.1 OS: Windows XP Submission from: (NULL) (156.56.79.54) A warning from optim() when reltol was specified for the L-BFGS-B method: "method L-BFGS-B uses 'fact' (and 'pgtol') instead of 'reltol' and 'abstol' in: optim(par = LL.0, fn = Low.Lim.NC.F, gr = NULL, m

[Rd] FFT

2005-10-07 Thread Jennifer Lai
Hi, Is FFT implemented in R takes advantage of multi-processors? I ran this benchmark from from http://www.sciviews.org, and AMD Opteron 2.2 GHz performs better than AMD Opteron 1.8 GHz on all test cases, except FFT operation. Both machines run same OSs (RedHat WS 3) and 2.2 GHz has more memo

Re: [Rd] svn version number

2005-10-07 Thread Duncan Murdoch
Gabor Grothendieck wrote: > On 10/7/05, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > >>Gabor Grothendieck wrote: >> >>>Is there some way of automatically including the svn version number >>>of a package in the DESCRIPTION file or otherwise so that one >>>can check from within R which svn version nu

Re: [Rd] Subscripting issues unrelated to [Subscripting fails if name of element is "" (PR#8161)]

2005-10-07 Thread Prof Brian Ripley
Jens, This is a completely separate issue. In indexing, character NA matches the name "NA". That was a bug, but it is nothing to do with the subject line or PR#8161, and for the record let's keep this separate. The `critical point' is not to build a theory around misunderstandings of sever

Re: [Rd] svn version number

2005-10-07 Thread Seth Falcon
On 7 Oct 2005, [EMAIL PROTECTED] wrote: > On 10/7/05, Duncan Murdoch <[EMAIL PROTECTED]> wrote: >> Gabor Grothendieck wrote: >>> Is there some way of automatically including the svn version >>> number of a package in the DESCRIPTION file or otherwise so that >>> one can check from within R which

Re: [Rd] Subscripting fails if name of element is "" (PR#8161)

2005-10-07 Thread Prof Brian Ripley
On Fri, 7 Oct 2005, Duncan Murdoch wrote: I haven't been following this conversation in order, but I think there's another bug here besides the one(s?) you identified: Jens had this example: x <- 1:4 names(x) <- c(NA, "NA", "a", "") x[names(x)] a 113 NA Shouldn't the seco

Re: [Rd] svn version number

2005-10-07 Thread Gabor Grothendieck
On 10/7/05, Duncan Murdoch <[EMAIL PROTECTED]> wrote: > Gabor Grothendieck wrote: > > Is there some way of automatically including the svn version number > > of a package in the DESCRIPTION file or otherwise so that one > > can check from within R which svn version number one has? > > You could do

Re: [Rd] svn version number

2005-10-07 Thread Duncan Murdoch
Gabor Grothendieck wrote: > Is there some way of automatically including the svn version number > of a package in the DESCRIPTION file or otherwise so that one > can check from within R which svn version number one has? You could do this by writing it into your Makefile, but there's no other exis

Re: [Rd] Building packages on Windows fails

2005-10-07 Thread Duncan Murdoch
Peter Kleiweg wrote: > Prof Brian Ripley schreef op de 7e dag van de wijnmaand van het jaar 2005: > > >>On Fri, 7 Oct 2005, Peter Kleiweg wrote: >> >> >>>Duncan Murdoch schreef op de 6e dag van de wijnmaand van het jaar 2005: >>> >>> On Fri, 7 Oct 2005, Peter Kleiweg wrote: >Wha

Re: [Rd] Subscripting fails if name of element is "" (PR#8161)

2005-10-07 Thread Duncan Murdoch
I haven't been following this conversation in order, but I think there's another bug here besides the one(s?) you identified: Jens had this example: > x <- 1:4 > names(x) <- c(NA, "NA", "a", "") > x[names(x)] a 113 NA Shouldn't the second entry in the result be 2, with na

Re: [Rd] Building packages on Windows fails

2005-10-07 Thread Prof Brian Ripley
On Fri, 7 Oct 2005, Peter Kleiweg wrote: > Prof Brian Ripley schreef op de 7e dag van de wijnmaand van het jaar 2005: > >> On Fri, 7 Oct 2005, Peter Kleiweg wrote: >> >>> Duncan Murdoch schreef op de 6e dag van de wijnmaand van het jaar 2005: >>> On Fri, 7 Oct 2005, Peter Kleiweg wrote:

Re: [Rd] Building packages on Windows fails

2005-10-07 Thread Peter Kleiweg
Prof Brian Ripley schreef op de 7e dag van de wijnmaand van het jaar 2005: > On Fri, 7 Oct 2005, Peter Kleiweg wrote: > > > Duncan Murdoch schreef op de 6e dag van de wijnmaand van het jaar 2005: > > > > > On Fri, 7 Oct 2005, Peter Kleiweg wrote: > > > > > > > What has changed in R for Windows

Re: [Rd] Gunilla aetiology

2005-10-07 Thread Ukko Applebaum
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Re: [Rd] svn version number

2005-10-07 Thread Gabor Grothendieck
Just want to clarify that it is the package itself that is being developed under svn; I was not referring to the svn version number of R. On 10/7/05, Gabor Grothendieck <[EMAIL PROTECTED]> wrote: > Is there some way of automatically including the svn version number > of a package in the DESCRIPTIO

Re: [Rd] Links to stylesheet are broken

2005-10-07 Thread Prof Brian Ripley
On Fri, 7 Oct 2005, Peter Kleiweg wrote: > > I did a standard install of R 2.2.0 on Linux. When I run > help.start(), I get an intro page that has a broken link to a > stylesheet. The same for the pages "Packages", "Search Engine & > Keywords", "About R", and "Resources". The other help pages do >

Re: [Rd] Building packages on Windows fails

2005-10-07 Thread Prof Brian Ripley
On Fri, 7 Oct 2005, Peter Kleiweg wrote: > Duncan Murdoch schreef op de 6e dag van de wijnmaand van het jaar 2005: > >> On Fri, 7 Oct 2005, Peter Kleiweg wrote: >> >>> >>> What has changed in R for Windows from version 1.7.1 to >>> 2.2.0 that won't allow me to build binary packages? >> >> Many thi

[Rd] Links to stylesheet are broken

2005-10-07 Thread Peter Kleiweg
I did a standard install of R 2.2.0 on Linux. When I run help.start(), I get an intro page that has a broken link to a stylesheet. The same for the pages "Packages", "Search Engine & Keywords", "About R", and "Resources". The other help pages do have a correct link to the stylesheet. -- Pete

[Rd] svn version number

2005-10-07 Thread Gabor Grothendieck
Is there some way of automatically including the svn version number of a package in the DESCRIPTION file or otherwise so that one can check from within R which svn version number one has? __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman

Re: [Rd] Building packages on Windows fails

2005-10-07 Thread Peter Kleiweg
Duncan Murdoch schreef op de 6e dag van de wijnmaand van het jaar 2005: > On Fri, 7 Oct 2005, Peter Kleiweg wrote: > > > > > What has changed in R for Windows from version 1.7.1 to > > 2.2.0 that won't allow me to build binary packages? > > Many things have changed; I don't know which is causin

[Rd] new.packages() problem (PR#8185)

2005-10-07 Thread blindglobe
Full_Name: AJ Rossini Version: 2.2.0 OS: Unix Submission from: (NULL) (160.62.4.10) new.packages() reports on packages which are installed as well as not installed, for packages installed using install.packages() and the argument installWithVers=TRUE This contrasts with reporting only on uninsta

Re: [Rd] Subscripting fails if name of element is "" (PR#8161)

2005-10-07 Thread Jens Oehlschlägel
Dear Brian, Thanks for picking this up. I think the critical point is that it is not a single isolated bug and it would be a main effort to get this stuff consistent, because it (and implications) seems to be spread all over the code. The to be applauded efforts to properly sort out "NA" vs. as.c