Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-30 Thread James Turner
> oops. It is ATLAS. I was able to run with a nonoptimized lapack. Just to confirm, it also works for me when I use Netlib BLAS instead of ATLAS. ___ Numpy-discussion mailing list Numpy-discussion@scipy.org http://projects.scipy.org/mailman/listinfo/num

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread David Cournapeau
Mathew Yeates wrote: > my set up is similar. Same cpu's. Except I am using atlas 3.9.1 and gcc > 4.2.4 > ATLAS 3.9.1 is a development version, and is not supposed to be used for production use. Please use 3.8.2 if you want to build your own atlas, cheers, David __

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread James Turner
> This smells like an ATLAS problem. You should seed a note to Clint > Whaley (the ATLAS guy). IIRC, ATLAS has some hand coded asm routines and > it seems that support for these very new processors might be broken. I believe the machine is a couple of years old, though it's a fairly high-end wo

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Robert Kern
On Tue, Jul 29, 2008 at 18:00, Mathew Yeates <[EMAIL PROTECTED]> wrote: > What got fixed? >>>(look at the second one, warnings wasn't imported?) -- Robert Kern "I have come to believe that the whole world is an enigma, a harmless enigma that is made terrible by our own mad attempt to interpret

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
What got fixed? Robert Kern wrote: > On Tue, Jul 29, 2008 at 17:41, Mathew Yeates <[EMAIL PROTECTED]> wrote: > >> Charles R Harris wrote: >> >>> This smells like an ATLAS problem. >>> >> I don't think so. I crash in a call to dsyevd which part of lapack but >> not atlas. Also, when

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Robert Kern
On Tue, Jul 29, 2008 at 17:41, Mathew Yeates <[EMAIL PROTECTED]> wrote: > Charles R Harris wrote: >> >> >> This smells like an ATLAS problem. > I don't think so. I crash in a call to dsyevd which part of lapack but > not atlas. Also, when I commented out the call to test_eigh_build I get > zillions

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
oops. It is ATLAS. I was able to run with a nonoptimized lapack. Mathew Yeates wrote: > Charles R Harris wrote: > >> This smells like an ATLAS problem. >> > I don't think so. I crash in a call to dsyevd which part of lapack but > not atlas. Also, when I commented out the call to test_eigh

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
Charles R Harris wrote: > > > This smells like an ATLAS problem. I don't think so. I crash in a call to dsyevd which part of lapack but not atlas. Also, when I commented out the call to test_eigh_build I get zillions of errors like (look at the second one, warnings wasn't imported?) =

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Charles R Harris
On Tue, Jul 29, 2008 at 2:48 PM, James Turner <[EMAIL PROTECTED]> wrote: > Thanks everyone. I think I might try using the Netlib BLAS, since > it's a server installation... but please let me know if you'd like > me to troubleshoot this some more (the sooner the easier). > This smells like an ATLA

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
more info when /linalg.py(872)eigh() calls dsyevd I crash James Turner wrote: > Thanks everyone. I think I might try using the Netlib BLAS, since > it's a server installation... but please let me know if you'd like > me to troubleshoot this some more (the sooner the easier). > > James. > > ___

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread James Turner
Thanks everyone. I think I might try using the Netlib BLAS, since it's a server installation... but please let me know if you'd like me to troubleshoot this some more (the sooner the easier). James. ___ Numpy-discussion mailing list Numpy-discussion@sci

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
I am using an ATLAS 64 bit lapack 3.9.1. My cpu (4 cpus) - processor : 0 vendor_id : GenuineIntel cpu family : 6 model : 23 model name : Intel(R) Xeon(R) CPU X5460 @ 3.16GHz stepping: 6 cpu MHz

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
my set up is similar. Same cpu's. Except I am using atlas 3.9.1 and gcc 4.2.4 James Turner wrote: >> Are you using ATLAS? If so, where did you get it and what cpu do you have? >> > > Yes. I have Atlas 3.8.2. I think I got it from > http://math-atlas.sourceforge.net. I also included Lapack 3.

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread James Turner
> Are you using ATLAS? If so, where did you get it and what cpu do you have? Yes. I have Atlas 3.8.2. I think I got it from http://math-atlas.sourceforge.net. I also included Lapack 3.1.1 from Netlib when building it from source. This worked on another machine. According to /proc/cpuinfo, I have

[Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread James Turner
Thanks, Robert. > Can you do > > numpy.test(verbosity=2) OK. Here is the line that fails: check_matvec (numpy.core.tests.test_numeric.TestDot)Floating exception (core dumped) > A gdb backtrace would also help. OK. I'm pretty ignorant about using debuggers, but I did "gdb python core.23696" a

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Charles R Harris
On Tue, Jul 29, 2008 at 1:16 PM, James Turner <[EMAIL PROTECTED]> wrote: > I have built NumPy 1.1.0 on RedHat Enterprise 3 (Linux 2.4.21 > with gcc 3.2.3 and glibc 2.3.2) and Python 2.5.1. When I run > numpy.test() I get a core dump, as follows. I haven't noticed > any special errors during the bu

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Mathew Yeates
I'm getting this too Ticket #652 ... ok Ticket 662.Segmentation fault Robert Kern wrote: > On Tue, Jul 29, 2008 at 14:16, James Turner <[EMAIL PROTECTED]> wrote: > >> I have built NumPy 1.1.0 on RedHat Enterprise 3 (Linux 2.4.21 >> with gcc 3.2.3 and glibc 2.3.2) and Python 2.5.1. When I run >

Re: [Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread Robert Kern
On Tue, Jul 29, 2008 at 14:16, James Turner <[EMAIL PROTECTED]> wrote: > I have built NumPy 1.1.0 on RedHat Enterprise 3 (Linux 2.4.21 > with gcc 3.2.3 and glibc 2.3.2) and Python 2.5.1. When I run > numpy.test() I get a core dump, as follows. I haven't noticed > any special errors during the build

[Numpy-discussion] Core dump during numpy.test()

2008-07-29 Thread James Turner
I have built NumPy 1.1.0 on RedHat Enterprise 3 (Linux 2.4.21 with gcc 3.2.3 and glibc 2.3.2) and Python 2.5.1. When I run numpy.test() I get a core dump, as follows. I haven't noticed any special errors during the build. Should I post the entire terminal output from "python setup.py install"? Mayb