Re: [Numpy-discussion] Texas Python Regional Unconference Reminders

2008-10-01 Thread Steve Lianoglou
Hi, Are there any plans to tape the presentations? Unfortunately some of us can't make it down to Texas, but the talks look quite interesting. Thanks, -steve On Oct 1, 2008, at 10:36 AM, Travis Vaught wrote: > Greetings, > > The Texas Python Regional Unconference is coming up this weekend > (

Re: [Numpy-discussion] building numpy locally but get error: undefined symbol: zgesdd_

2008-09-16 Thread Steve Lianoglou
Hi, On Sep 16, 2008, at 11:13 AM, David Cournapeau wrote: > Yes, I think they package everything by themselves. I am starting to > think that we should do the same for blas/lapack, that's also how R > does > it by default, and I am so tired of seeing the same errors coming > again > and again

Re: [Numpy-discussion] no mail

2008-05-20 Thread Steve Lianoglou
> Can I please be removed from this mailing list There is a link at the bottom of every email for the numpy discussion list: > http://projects.scipy.org/mailman/listinfo/numpy-discussion At the bottom of that page, you'll find what you're looking for, where it says "To unsubscribe from Numpy

Re: [Numpy-discussion] Numpy-discussion Digest, Vol 19, Issue, 44

2008-04-10 Thread Steve Lianoglou
Hi, > I receive the NumPy and SciPy digests because the amount of traffic > on the lists is so high and my time to keep up with them is so limited > (there is probably a way to filter emails in Thunderbird that would > work, but I still have to figure that out). Why not just create a filter that

Re: [Numpy-discussion] ANN: Enthought Python Distribution - Beta

2008-02-28 Thread Steve Lianoglou
> On Wed, 27 Feb 2008, Travis Vaught apparently wrote: >> http://www.enthought.com/epd > > Looks good. > An increasing number of my students are buying Macs, > so the OSX support will be very welcome. Yeah ... agreed, this is great! -steve ___ Numpy-disc

Re: [Numpy-discussion] Error importing from numpy.matlib

2008-01-05 Thread Steve Lianoglou
> This is the behaviour you'd get if the module's __all__ attribute > lists objects which don't exist in the module. Looks like a regression > in r4659; fixed in SVN now as r4674. Thanks! -steve ___ Numpy-discussion mailing list Numpy-discussion@scipy.o

[Numpy-discussion] Error importing from numpy.matlib

2008-01-03 Thread Steve Lianoglou
Hi all, I can't figure out why this is happening ... I just recently recompiled numpy/scipy from svn just for the heck of it. Anyway, somewhere in my codebase (for a long time now) I'm doing: from numpy.matlib import * Now, when I try to use this code, or just type that in the interpreter,

Re: [Numpy-discussion] numpy : your experiences?

2007-11-17 Thread Steve Lianoglou
Hi Rahul, > a) Can you guys tell me briefly about the kind of problems you are > tackling with numpy and scipy? I'm a grad student "doing" computational biology. I primarily use the NumPy/SciPy/matplotlib triumvirate as a post processing tool to analyze what the heck happened after we run so

Re: [Numpy-discussion] [ANN] Release of the first PyTables video

2007-11-17 Thread Steve Lianoglou
Hi, > = > Release of the first PyTables video > = > > `Carabos `_ is very proud to announce the > first of a series of videos dedicated to introducing the main features > of PyTables to the public in a

Re: [Numpy-discussion] Request for advice: project to get NumPy working in IronPython

2007-10-26 Thread Steve Lianoglou
> What are people's opinions about the value of NumPy and SciPy on > the CLR? If anything, wouldn't the "big win" (if it's a win at all) be to get NumPy/SciPy working on top of the JVM (as T. Hochber tried)? This way it's pretty much universally portable. I know Jython isn't as up to speed

Re: [Numpy-discussion] Trac ticket

2007-08-29 Thread Steve Lianoglou
> Perhaps a stupid question, but I don't seem to find any info about it > on the web. > I would like to take up a (simple) Numpy Trac ticket, and fix it in > the Numpy trunk. How can I assign the ticket to myself? I'm not sure how the trac system is setup @ numpy, but you may not have the perms

Re: [Numpy-discussion] matlab vs. python question

2007-05-05 Thread Steve Lianoglou
On May 5, 2007, at 6:54 AM, Alexander Schmolck wrote: > "Bill Baxter" <[EMAIL PROTECTED]> writes: > >> also pulls the numpy namespace into the global one. For debugger >> integration, is there any way to set up ipython so that on errors it >> will pop up a GUI debugger that shows the line of sour

Re: [Numpy-discussion] matlab vs. python question

2007-04-26 Thread Steve Lianoglou
> Beside proper programing paradigm Python easily scales to large- > scale number crunching: You can run large-matrices calculations > with about 1/2 to 1/4 of memory consumption comparing to Matlab. Is that really true? (The large-matrix number crunching, not the proper programming paradigm

Re: [Numpy-discussion] Fwd: Getting subarray

2007-04-23 Thread Steve Lianoglou
> I have two arrays: > > a = numpy.array([0,1,2,3,4,5,6,7,8,9]) > b = numpy.array([0,0,1,1,2,2,0,1,2,3]) > > I would like to get the part of a that corresponds > to where b is equal to i. > > For example: > > i = 0 => ([0,1,6]) > i = 1 => ([2,3,7]) a[b == 1] and a[b == 0] work too, btw. -ste

Re: [Numpy-discussion] Fwd: Getting subarray

2007-04-23 Thread Steve Lianoglou
Hi, On Apr 23, 2007, at 11:30 AM, Tommy Grav wrote: > I have two arrays: > > a = numpy.array([0,1,2,3,4,5,6,7,8,9]) > b = numpy.array([0,0,1,1,2,2,0,1,2,3]) > > I would like to get the part of a that corresponds > to where b is equal to i. > > For example: > > i = 0 => ([0,1,6]) > i = 1 => ([2,3,

Re: [Numpy-discussion] Newbie Questio: Unused in wild import

2007-04-13 Thread Steve Lianoglou
Hi VĂ­ctor, > I'm really new to Python and SciPy and having a strange problem. > I've installed Python 2.5 on Windows, numpy (last version), Eclipse > 3.2 > and latest PyDev extensions. > > When importing numpy ("from numpy import *") the next warning is > issued : > > Unused in wild import: fr

Re: [Numpy-discussion] Adapting algorithm to accept Scipy sparse matrix

2007-03-21 Thread Steve Lianoglou
Hi David, > The "worst" problem I encountered is that sparse matrices do not > seem to support the kind of indexing I need. At least I get > "NotImplementedError: sequence indexing not yet fully supported" > and " supports slices only of a single row" > errors all the time. I agree .. thi

Re: [Numpy-discussion] Problem compiling numpy with Python 2.5 on Powerbook

2007-03-13 Thread Steve Lianoglou
Hi, > Hi, guys. > > I'm trying to install numpy from subversion on my Powerbook 12", from > a fresh install (Mac OS X 10.4.8). I downloaded the official universal > Python 2.5 from python.org, and installed GCC > (powerpc-apple-darwin8-gcc-4.0.0) from XCode. > > Installation fails with the message:

Re: [Numpy-discussion] [ANN] mlabrap-1.0b: a high level python to matlab

2007-02-28 Thread Steve Lianoglou
Hi, > Mlabwrap-1.0 is a high-level python to matlab(tm) bridge that makes > calling > matlab functions from python almost as convenient as using a normal > python > library. It is available under a very liberal license (BSD/MIT) and > should > work on all major platforms and (non-ancient) py

Re: [Numpy-discussion] Cutting 1.0.2 release

2007-01-31 Thread Steve Lianoglou
> Thanks Alan & Chris, > > My apologies. I was trying ones(), zeros() and empty() in ipython > 0.7.2 > with the -pylab option and getting the wrong functions. On my system, > ipython -pylab imports the namespace of the oldnumeric wrapper > versions > of ones(), zeros() and empty() and I had ass

Re: [Numpy-discussion] Selected and altering a submatrix

2007-01-30 Thread Steve Lianoglou
for the general case. Thanks for the help, -steve On Jan 30, 2007, at 12:09 AM, Robert Kern wrote: > Steve Lianoglou wrote: >> === >> import numpy as N >> mat = N.zeros((10,10)) >> rows = [0,1,2] >> cols = [4,5,6] >> >> for row in rows: >>

[Numpy-discussion] Selected and altering a submatrix

2007-01-29 Thread Steve Lianoglou
Hi, I was just curious what the "correct" (fast) way to select and alter a submatrix. For example, say I have a 10x10 array and only want to add some number to the elements in the submatrix that consists of the [0,1,2] th rows, and [4,5,6]th colums. You can imagine that those rows/cols sele

Re: [Numpy-discussion] Build numpy without support of "long double' on OS-X

2007-01-25 Thread Steve Lianoglou
>> Of course .. that really shouldn't matter if you're just compiling it >> for yourself for just that cpu. >> > On the contrary ! > I'm trying to provide a precompiled build of numpy together with a > couple a handy > functions and classes that I made myself, > to establish Python as a development

Re: [Numpy-discussion] Build numpy without support of "long double' on OS-X

2007-01-25 Thread Steve Lianoglou
>> Generally speaking, you need to build binaries on the lowest- >> versioned OS X that >> you intend to run on. >> > The problem with building on 10.3 is that it generally comes only with > gcc 3.3. I remember that some things require gcc4 - right ? I think that might only bite you if you want

Re: [Numpy-discussion] building NumPy with Intel CC & MKL (solved!)

2007-01-24 Thread Steve Lianoglou
Hi Rex, > Thank you for taking the time to write such a detailed explanation. If > only the documentation were so detailed... Now that you've gone through your odyssey trying to numpy/scipy w/ this particular combo (SuSE/MKL/IntelCC), now would be a great time to whip up wiki page ... you kno

Re: [Numpy-discussion] svn numpy did not build on os x

2007-01-24 Thread Steve Lianoglou
Hi, >> I got gfortran from hpc.sourceforge.net. I just now noticed that my >> gcc is "experimental", I hope that isn't the issue. > > It probably is the issue. One thing to note is that (at least when I d/l'd it), the hpc fortran download also has inside it a version of gcc which it will dump

Re: [Numpy-discussion] Docstring standards for NumPy and SciPy

2007-01-10 Thread Steve Lianoglou
Hi, Overall I like your train of thought. If we're going use a modified take on the structured text: > Use *italics*, **bold**, and `courier` if needed in any explanations > (but not for variable names and doctest code or multi-line code) I've always been a fan of using /'s for italics, and si

Re: [Numpy-discussion] recompiling needed for binary module after numpy 1.0

2007-01-07 Thread Steve Lianoglou
Hi, > I have just completed installing ipython from source by running: > >python setup.py install > > in a directory from which I downloaded ipython via subversion. That > was pretty painless (this is my first such install of a relatively > big program, BTW). If scipy, numpy and matplotlib cou

Re: [Numpy-discussion] Newbie Question, Probability

2006-12-20 Thread Steve Lianoglou
On Dec 20, 2006, at 8:41 PM, Alan G Isaac wrote: > On Wed, 20 Dec 2006, Robert Kern apparently wrote: >> We have a full complement of PDFs, CDFs, etc. in scipy. > > This is my "most missed" functionality in NumPy. > (For now I feel cannot ask students to install SciPy.) If they're already install

Re: [Numpy-discussion] a==b for numpy arrays

2006-12-11 Thread Steve Lianoglou
> It's not relevant to the point of this discussion all that much, but: > >> a[a < 0] = 0 >> a[less(a, 0)] = 0 > > Instead I've been doing something like: > > a[where(a < 0)] = 0 > > I didn't realized you could do it the other way. Is there a > difference somewhere between the two, or are they inte

Re: [Numpy-discussion] a==b for numpy arrays

2006-12-11 Thread Steve Lianoglou
Hi, It's not relevant to the point of this discussion all that much, but: > a[a < 0] = 0 > a[less(a, 0)] = 0 Instead I've been doing something like: a[where(a < 0)] = 0 I didn't realized you could do it the other way. Is there a difference somewhere between the two, or are they interchangeab

Re: [Numpy-discussion] problems installing NumPy on OSX

2006-12-03 Thread Steve Lianoglou
>> You got my hopes up for a second there, but I can do neither: >> >> Python 2.5 (r25:51918, Sep 19 2006, 08:49:13) >> [GCC 4.0.1 (Apple Computer, Inc. build 5341)] on darwin >> Type "help", "copyright", "credits" or "license" for more >> information. > from numpy import * >> Running from nu

Re: [Numpy-discussion] List migration complete

2006-11-16 Thread Steve Lianoglou
> The list migration has completed successfully. numpy- > [EMAIL PROTECTED] is > the new address for this list. Hey look ... no more advertisements! Good job folks, thanks! One thing: I'm not sure if this was intentional, but the Reply-To field isn't set, so in order to reply back to list we