Re: [Numpy-discussion] ANN: NumPy 1.6.1 release candidate 3

2011-07-11 Thread Robert Kern
On Mon, Jul 11, 2011 at 16:12, Christoph Gohlke wrote: > > I tested rc3. It looks good, except that on win-amd64 whenever numpy is > imported, a 'Forcing DISTUTILS_USE_SDK=1' is printed from line 377 in > misc_util.py. Hence some tests of other packages fail. > > This is due to a recent change: >

Re: [Numpy-discussion] ANN: NumPy 1.6.1 release candidate 3

2011-07-11 Thread Christoph Gohlke
On 7/11/2011 12:28 PM, Ralf Gommers wrote: > Hi, > > I am pleased to announce the availability of the third release candidate > of NumPy 1.6.1. This is a bugfix release, list of fixed bugs: > #1834 einsum fails for specific shapes > #1837 einsum throws nan or freezes python for specific array

[Numpy-discussion] inverting and calculating eigenvalues for many small matrices

2011-07-11 Thread Daniel Wheeler
Hi, I am trying to find the eigenvalues and eigenvectors as well as the inverse for a large number of small matrices. The matrix size (MxM) will typically range from 2x2 to 8x8 at most. The number of matrices (N) can be from 100 up to a million or more. My current solution is to define "eig" and "i

Re: [Numpy-discussion] numpy build issue on i7-2600K CPU

2011-07-11 Thread Ralf Gommers
Hi Christoph, On Mon, Jul 11, 2011 at 3:57 AM, Christoph Gohlke wrote: > Hello, > > building numpy 1.6.1rc2 on Windows, i7-2600K CPU, with msvc9 failed with > the following error: > > File "numpy/core/setup_common.py", line 271, in long_double_representation >raise ValueError("Could not lock

[Numpy-discussion] ANN: NumPy 1.6.1 release candidate 3

2011-07-11 Thread Ralf Gommers
Hi, I am pleased to announce the availability of the third release candidate of NumPy 1.6.1. This is a bugfix release, list of fixed bugs: #1834 einsum fails for specific shapes #1837 einsum throws nan or freezes python for specific array shapes #1838 object <-> structured type arrays regres

Re: [Numpy-discussion] Missing Values Discussion

2011-07-11 Thread Matthew Brett
Hi, On Mon, Jul 11, 2011 at 3:16 PM, Bruce Southey wrote: > On 07/11/2011 08:08 AM, Matthew Brett wrote: >> Hi, >> >> On Mon, Jul 11, 2011 at 3:52 AM, Bruce Southey  wrote: >>> On Fri, Jul 8, 2011 at 4:35 PM, Matthew Brett   >>> wrote: Hi, On Fri, Jul 8, 2011 at 8:34 PM, Bruce Sout

Re: [Numpy-discussion] Missing Values Discussion

2011-07-11 Thread Bruce Southey
On 07/11/2011 08:08 AM, Matthew Brett wrote: > Hi, > > On Mon, Jul 11, 2011 at 3:52 AM, Bruce Southey wrote: >> On Fri, Jul 8, 2011 at 4:35 PM, Matthew Brett >> wrote: >>> Hi, >>> >>> On Fri, Jul 8, 2011 at 8:34 PM, Bruce Southey wrote: On Fri, Jul 8, 2011 at 12:55 PM, Matthew Brett

Re: [Numpy-discussion] Missing Values Discussion

2011-07-11 Thread Matthew Brett
Hi, On Mon, Jul 11, 2011 at 3:52 AM, Bruce Southey wrote: > On Fri, Jul 8, 2011 at 4:35 PM, Matthew Brett wrote: >> Hi, >> >> On Fri, Jul 8, 2011 at 8:34 PM, Bruce Southey wrote: >>> On Fri, Jul 8, 2011 at 12:55 PM, Matthew Brett >>> wrote: Hi, On Fri, Jul 8, 2011 at 6:38 PM, B

[Numpy-discussion] Problem with ufunc of a numpy.ndarray derived class

2011-07-11 Thread Martin DRUON
Hi, I have a problem with the ufunc return type of a numpy.ndarray derived class. In fact, I subclass a numpy.ndarray using the tutorial : http://docs.scipy.org/doc/numpy/user/basics.subclassing.html But, for example, if I execute the "max" ufunc from my subclass, the return type differs from

Re: [Numpy-discussion] FloatingPointError: overflow encountered in multiply

2011-07-11 Thread Roy Lowrance
I found and fixed the problem. I had performed a distance computation of all point to all points. My points included a query point and I needed to set its distance to something large. So I did distances[query_point] = 1e308; ts = distances / band_width; x = ts * ts and got the overflow, which makes

[Numpy-discussion] Post-doctoral position in image & data analysis for image-based high-content screening

2011-07-11 Thread Thouis (Ray) Jones
Short summary: A funded post-doctoral position in data analysis, machine-learning, and statistics applied to biological image-based high-content screening is available at the BioPhenics platform of the Curie Institute (Paris, France). The position involves development and maintenance of tools in P