Re: [Numpy-discussion] Recommndations for an easy GUI

2011-06-27 Thread Nicolas Rougier
Have a look at glumpy: http://code.google.com/p/glumpy/ It's quite simple and very fast for images (it's based on OpenGL/shaders). Nicolas On Jun 28, 2011, at 6:38 AM, Nadav Horesh wrote: > I have an application which generates and displays RGB images as rate of > several frames/seconds (5-

Re: [Numpy-discussion] Recommndations for an easy GUI

2011-06-27 Thread Benjamin Root
On Monday, June 27, 2011, Nadav Horesh wrote: > > > > > > > > I have an application which generates and displays RGB images as rate of > several frames/seconds (5-15). Currently I use Tkinter+PIL, but I have a > problem that it slows down the rate significantly. > I am looking for a fast and ea

[Numpy-discussion] Recommndations for an easy GUI

2011-06-27 Thread Nadav Horesh
I have an application which generates and displays RGB images as rate of several frames/seconds (5-15). Currently I use Tkinter+PIL, but I have a problem that it slows down the rate significantly. I am looking for a fast and easy alternative. Platform: Linux I prefer tools that would work also

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Mark Wiebe
On Mon, Jun 27, 2011 at 7:07 PM, Keith Goodman wrote: > On Mon, Jun 27, 2011 at 8:55 AM, Mark Wiebe wrote: > > First I'd like to thank everyone for all the feedback you're providing, > > clearly this is an important topic to many people, and the discussion has > > helped clarify the ideas for me

Re: [Numpy-discussion] data type specification when using numpy.genfromtxt

2011-06-27 Thread Derek Homeier
Hi Chao, by mistake did not reply to the list last time... On 27.06.2011, at 10:30PM, Chao YUE wrote: Hi Derek! > > I tried with the lastest version of python(x,y) package with numpy version of > 1.6.0. I gave the data to you with reduced columns (10 column) and rows. > > b=np.genfromtxt('99Bu

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Keith Goodman
On Mon, Jun 27, 2011 at 8:55 AM, Mark Wiebe wrote: > First I'd like to thank everyone for all the feedback you're providing, > clearly this is an important topic to many people, and the discussion has > helped clarify the ideas for me. I've renamed and updated the NEP, then > placed it into the ma

[Numpy-discussion] [ANN] Theano 0.4.0 released

2011-06-27 Thread David Warde-Farley
== Announcing Theano 0.4.0 === This is a major release, with lots of new features, bug fixes, and some interface changes (deprecated or potentially misleading features were removed). The upgrade is recommended for everybody, unless you rely on depre

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Pierre GM
On Jun 27, 2011, at 9:59 PM, josef.p...@gmail.com wrote: > > Just a question how things would work with the new model. > How can you implement the "use" keyword from R's cov (or cor), with > minimal data copying > > I think the basic masked array version would (or does) just assign 0 > to the mi

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread josef . pktd
On Mon, Jun 27, 2011 at 5:01 PM, Mark Wiebe wrote: > On Mon, Jun 27, 2011 at 2:59 PM, wrote: >> >> On Mon, Jun 27, 2011 at 2:24 PM, eat wrote: >> > >> > >> > On Mon, Jun 27, 2011 at 8:53 PM, Mark Wiebe wrote: >> >> >> >> On Mon, Jun 27, 2011 at 12:44 PM, eat wrote: >> >>> >> >>> Hi, >> >>> >>

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Mark Wiebe
On Mon, Jun 27, 2011 at 12:18 PM, Matthew Brett wrote: > Hi, > > On Mon, Jun 27, 2011 at 5:53 PM, Charles R Harris > wrote: > > > > > > On Mon, Jun 27, 2011 at 9:55 AM, Mark Wiebe wrote: > >> > >> First I'd like to thank everyone for all the feedback you're providing, > >> clearly this is an imp

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Mark Wiebe
On Mon, Jun 27, 2011 at 2:59 PM, wrote: > On Mon, Jun 27, 2011 at 2:24 PM, eat wrote: > > > > > > On Mon, Jun 27, 2011 at 8:53 PM, Mark Wiebe wrote: > >> > >> On Mon, Jun 27, 2011 at 12:44 PM, eat wrote: > >>> > >>> Hi, > >>> > >>> On Mon, Jun 27, 2011 at 6:55 PM, Mark Wiebe wrote: > > >

Re: [Numpy-discussion] data type specification when using numpy.genfromtxt

2011-06-27 Thread Chao YUE
Hi Derek! I tried with the lastest version of python(x,y) package with numpy version of 1.6.0. I gave the data to you with reduced columns (10 column) and rows. b=np.genfromtxt('99Burn2003all_new.csv',delimiter=';',names=True,usecols=tuple(range(10)),dtype=['S10'] + [ float for n in range(9)]) wo

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread josef . pktd
On Mon, Jun 27, 2011 at 2:24 PM, eat wrote: > > > On Mon, Jun 27, 2011 at 8:53 PM, Mark Wiebe wrote: >> >> On Mon, Jun 27, 2011 at 12:44 PM, eat wrote: >>> >>> Hi, >>> >>> On Mon, Jun 27, 2011 at 6:55 PM, Mark Wiebe wrote: First I'd like to thank everyone for all the feedback you're p

[Numpy-discussion] histogram2d error with empty inputs

2011-06-27 Thread Benjamin Root
I found another empty input edge case. Somewhat recently, we fixed an issue with np.histogram() and empty inputs (so long as the bins are somehow known). >>> np.histogram([], bins=4) (array([0, 0, 0, 0]), array([ 0. , 0.25, 0.5 , 0.75, 1. ])) However, histogram2d needs the same treatment.

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread eat
On Mon, Jun 27, 2011 at 8:53 PM, Mark Wiebe wrote: > On Mon, Jun 27, 2011 at 12:44 PM, eat wrote: > >> Hi, >> >> On Mon, Jun 27, 2011 at 6:55 PM, Mark Wiebe wrote: >> >>> First I'd like to thank everyone for all the feedback you're providing, >>> clearly this is an important topic to many peopl

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Mark Wiebe
On Mon, Jun 27, 2011 at 12:44 PM, eat wrote: > Hi, > > On Mon, Jun 27, 2011 at 6:55 PM, Mark Wiebe wrote: > >> First I'd like to thank everyone for all the feedback you're providing, >> clearly this is an important topic to many people, and the discussion has >> helped clarify the ideas for me.

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread eat
Hi, On Mon, Jun 27, 2011 at 6:55 PM, Mark Wiebe wrote: > First I'd like to thank everyone for all the feedback you're providing, > clearly this is an important topic to many people, and the discussion has > helped clarify the ideas for me. I've renamed and updated the NEP, then > placed it into

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Derek Homeier
On 27.06.2011, at 7:11PM, Nils Becker wrote: >>> Finally, the former Scientific.IO NetCDF interface is now part of >>> scipy.io, but I assume it only supports netCDF 3 (the documentation >>> is not specific about that). This might be the easiest option for a >>> portable data format (if Matlab sup

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread eat
On Mon, Jun 27, 2011 at 8:18 PM, Matthew Brett wrote: > Hi, > > On Mon, Jun 27, 2011 at 5:53 PM, Charles R Harris > wrote: > > > > > > On Mon, Jun 27, 2011 at 9:55 AM, Mark Wiebe wrote: > >> > >> First I'd like to thank everyone for all the feedback you're providing, > >> clearly this is an impo

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Matthew Brett
Hi, On Mon, Jun 27, 2011 at 5:53 PM, Charles R Harris wrote: > > > On Mon, Jun 27, 2011 at 9:55 AM, Mark Wiebe wrote: >> >> First I'd like to thank everyone for all the feedback you're providing, >> clearly this is an important topic to many people, and the discussion has >> helped clarify the i

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Nils Becker
Hi, >> Finally, the former Scientific.IO NetCDF interface is now part of >> scipy.io, but I assume it only supports netCDF 3 (the documentation >> is not specific about that). This might be the easiest option for a >> portable data format (if Matlab supports it). > Yes, it is NetCDF 3. In recent

Re: [Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Charles R Harris
On Mon, Jun 27, 2011 at 9:55 AM, Mark Wiebe wrote: > First I'd like to thank everyone for all the feedback you're providing, > clearly this is an important topic to many people, and the discussion has > helped clarify the ideas for me. I've renamed and updated the NEP, then > placed it into the m

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Derek Homeier
On 27.06.2011, at 6:36PM, Robert Kern wrote: >> Some late comments on the note (I was a bit surprised that HDF5 installation >> seems to be a serious hurdle to many - maybe I've just been profiting from >> the fink build system for OS X here - but I also was not aware that the >> current netCDF

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Robert Kern
On Mon, Jun 27, 2011 at 11:17, Derek Homeier wrote: > On 21.06.2011, at 8:35PM, Christopher Barker wrote: > >> Robert Kern wrote: >>> https://raw.github.com/numpy/numpy/master/doc/neps/npy-format.txt >> >> Just a note. From that doc: >> >> """ >>     HDF5 is a complicated format that more or less

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Robert Kern
On Tue, Jun 21, 2011 at 13:35, Christopher Barker wrote: > Robert Kern wrote: >> https://raw.github.com/numpy/numpy/master/doc/neps/npy-format.txt > > Just a note. From that doc: > > """ >     HDF5 is a complicated format that more or less implements >     a hierarchical filesystem-in-a-file.  Thi

Re: [Numpy-discussion] fast numpy i/o

2011-06-27 Thread Derek Homeier
On 21.06.2011, at 8:35PM, Christopher Barker wrote: > Robert Kern wrote: >> https://raw.github.com/numpy/numpy/master/doc/neps/npy-format.txt > > Just a note. From that doc: > > """ > HDF5 is a complicated format that more or less implements > a hierarchical filesystem-in-a-file. This f

[Numpy-discussion] missing data discussion round 2

2011-06-27 Thread Mark Wiebe
First I'd like to thank everyone for all the feedback you're providing, clearly this is an important topic to many people, and the discussion has helped clarify the ideas for me. I've renamed and updated the NEP, then placed it into the master NumPy repository so it has a more permanent home here: