Bug#1091895: ITP: exprtk -- C++ Mathematical Expression Toolkit Library Documentation

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: exprtk Version : 0.0.3 Upstream Author : Arash Partow * URL : https://github.com/ArashPartow/exprtk * License : Expat Programming Lang: C++ Description : C++ Mathematical

Bug#1071207: ITP: r-cran-calculus -- High Dimensional Numerical and Symbolic Calculus

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: r-cran-calculus Version : 1.0.1 Upstream Author : Emanuele Guidotti * URL : https://cran.r-project.org/package=calculus * License : GPL-3 Programming Lang: GNU R Description

Bug#1071176: ITP: python-htmltools -- Tools for creating, manipulating, and writing HTML

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: python-htmltools Version : 0.5.1 Upstream Author : Posit Software, PBC * URL : https://github.com/rstudio/py-htmltools * License : Expat Programming Lang: Python Description

Bug#956194: streamlit status

Hello, Is anybody still interested in streamlit? Some time ago I packaged its dependency node-xxhashjs and ended up maintaining it. I do not use node-xxhashjs myself and would like to pass its maintenance to people interested in streamlit. Andrius

Bug#1068578: RFH: singularity-container -- container platform focused on supporting "Mobility of Compute"

Hi Nilesh, On 2024-04-10 19:53, Nilesh Patra wrote: On Mon, Apr 08, 2024 at 08:59:26AM +0300, Andrius Merkys wrote: On 2024-04-07 15:28, Nilesh Patra wrote: Assistance required with maintaining the singularity-container package. I am not offering help with singularity-container, but do you

Bug#1068692: RFP: python-pycddl -- Deserialize CBOR and/or do CDDL schema validation

Package: wnpp Severity: wishlist X-Debbugs-CC: pkg-rust-maintain...@lists.alioth.debian.org * Package name: python-pycddl Version : 0.6.1 Upstream Author : Systema Development LLC * URL : https://gitlab.com/tahoe-lafs/pycddl * License : Expat Programming Lang

Bug#1068578: RFH: singularity-container -- container platform focused on supporting "Mobility of Compute"

Hi Nilesh, On 2024-04-07 15:28, Nilesh Patra wrote: Assistance required with maintaining the singularity-container package. I am not offering help with singularity-container, but do you by any chance know why apptainer is not packaged for Debian? I cannot find a wnpp bug. Thanks for caring

Bug#1068294: RFH: liboqs -- library for quantum-safe cryptographic algorithms

Package: wnpp Severity: normal In the light of recent calls to increase the quality and the bus factor of security-related packages, I request assistance with maintaining the liboqs package. I do not have enough time nor expertise to properly maintain liboqs alone. The package is sid-only pe

Bug#1003512: closed by Debian FTP Masters (reply to Patrick Winnertz ) (Bug#1003512: fixed in cherrytree 1.1.0+dfsg-1)

Hi Patrick, On 2024-03-28 17:09, Debian Bug Tracking System wrote: This is an automatic notification regarding your Bug report which was filed against the wnpp package: #1003512: RFA: cherrytree -- hierarchical note taking application It has been closed by Debian FTP Masters (reply to Patric

Bug#943315: ITP: vst3sdk -- professional audio plugin development kit

s built by debian/get-orig-source. I plan to import the constructed MUT into the same git repository [1] to simplify its usage, but I will probably exclude doc/ subdirectory due to multiple source-is-missing problems. [1] https://salsa.debian.org/merkys/vst3sdk Andrius

Bug#1067212: ITP: libgraph-grammar-perl -- Grammar for graphs

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: libgraph-grammar-perl Version : 0.1.0 Upstream Author : Andrius Merkys * URL : https://metacpan.org/release/Graph-Grammar * License : BSD-3-Clause Programming Lang: Perl Description

Bug#1063880: ITP: tmpwatch -- tmpwatch is a utility searches for files not accessed in a specific time and deletes them

Hi, On 2024-02-14 00:21, Peter Hyman wrote: Description : tmpwatch is a utility searches for files not accessed in a specific time and deletes them I fail to parse the short description as a sentence. Maybe: s/utility searches/utility which searches/ Best, Andrius

Bug#1058865: ITP: python-pubchempy -- pubchem python rest api chemistry cheminformatics

Hi Yogeswaran, On 2023-12-17 09:57, Yogeswaran Umasankar wrote: * Package name: python-pubchempy Version : 1.0.4 Upstream Contact: Matt Swain * URL :https://github.com/mcs07/PubChemPy * License : Expat Programming Lang: Python Description : pubchem

Bug#1053729: RFP: SAIL image decoding library

Hi Sudip, On 2023-12-13 12:28, Sudip Mukherjee wrote: Hi Andrius, On Wed, Oct 18, 2023 at 08:38:52AM +0300, Andrius Merkys wrote: Hi Dmitry, On 2023-10-17 16:25, Dmitry Baryshev wrote: > Does it produce desired Debian packages? I've just pushed a couple of fixes to the Debian ru

Bug#1056343: ITP: nanovg -- antialiased vector graphics rendering library for OpenGL

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: nanovg Version : 0.0~git20230826.f93799c Upstream Author : Mikko Mononen * URL : https://github.com/memononen/nanovg * License : Zlib Programming Lang: C Description : antialiased

Bug#943315: ITP: vst3sdk -- professional audio plugin development kit

Hi IOhannes, On Wed, 23 Oct 2019 10:31:40 +0200 IOhannes m zmoelnig wrote: Package: wnpp Severity: wishlist Owner: IOhannes m zmoelnig * Package name: vst3sdk Version : 3.6.13 Upstream Author : Steinberg Media Technologies GmbH * URL : https://github.com/steinberg

Bug#995352: dput tahoe-lafs_1.17.0-1_amd64.changes --delayed 7

Hello, As I have not received any response, I uploaded tahoe-lafs to NEW with '--delayed 7'. If you are against it, please let me know and/or 'dcut rm' it from delayed NEW queue. Best wishes, Andrius

Bug#1054572: ITP: libgraph-moreutils-perl -- utilities for Perl graphs

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: libgraph-moreutils-perl Version : 0.1.0 Upstream Author : Andrius Merkys * URL : https://metacpan.org/release/Graph-MoreUtils * License : LGPL-3 Programming Lang: Perl Description

Bug#1053729: RFP: SAIL image decoding library

Hi Dmitry, On 2023-10-17 16:25, Dmitry Baryshev wrote: > Does it produce desired Debian packages? I've just pushed a couple of fixes to the Debian rules. I'm able to build packages on LUbuntu 23.04. Maybe a couple of small fixes are still needed to build packages on Debian. So the recommende

Bug#1053729: RFP: SAIL image decoding library

Hi Dmitry, On 2023-10-17 13:29, Dmitry Baryshev wrote: It would be great to have SAIL in Debian, at least in experimental. It's a C/C++ image decoding library similar to FreeImage. It's already available in Conan and VCPKG with thousands of installations. Website: https://sail.software/

Bug#1054097: ITP: libparse-man-perl -- Perl library for parsing nroff-formatted manpages

Hi Ole, On 2023-10-17 02:05, Ole Peder Brandtzæg wrote: Package: wnpp Severity: wishlist Owner: Andrius Merkys X-Debbugs-Cc: debian-de...@lists.debian.org * Package name: libparse-man-perl Version : 0.03 Upstream Author : Paul Evans * URL : https://metacpan.org

Bug#1054001: ITP: libapp-sdview-perl -- terminal document viewer for POD and other syntaxes

Hi Ole, On Mon, 16 Oct 2023, 00:09 Ole Peder Brandtzæg, wrote: > On Sun, Oct 15, 2023 at 07:49:58PM +0300, Andrius Merkys wrote: > > I am as well interested in having Parse::Man in Debian. I can help you by > > packaging it if you wish. > > Wonderful, should I just file an

Bug#1054001: ITP: libapp-sdview-perl -- terminal document viewer for POD and other syntaxes

Hi Ole, On Sun, 15 Oct 2023, 19:42 Ole Peder Brandtzæg, wrote: > libapp-sdview-perl does depend on a few other modules (all by the same > upstream author) not presently packaged in Debian, so they would need to > be packaged, too, but I figured I should file this first. They are: > > - Object::P

Bug#1053782: RFP: node-vite -- Next Generation Frontend Tooling

Hi Yadd, On 2023-10-11 09:39, Yadd wrote: Better view of dependencies (`npm2deb depends` is often false): $ pkgjs-depends vite # vite@4.4.11 # 13 missing npm module(s) DEPENDENCIES:   esbuild (esbuild)   node-chokidar (chokidar)   node-immutable (immutable)   node-less (less)   node-postcs

Bug#1053782: RFP: node-vite -- Next Generation Frontend Tooling

Package: wnpp Severity: wishlist X-Debbugs-Cc: debian-de...@lists.debian.org Control: block 1042095 by -1 * Package name: node-vite Version : 4.4.11 Upstream Author : Evan You * URL : https://github.com/vitejs/vite * License : Expat Programming Lang: JavaScri

Bug#995352: tahoe-lafs: progress

X-Debbugs-Cc: team+tahoe-t...@tracker.debian.org On Wed, 25 Jan 2023 14:10:37 +0200 Andrius Merkys wrote: I have achieved some progress in packaging tahoe-lafs 1.17.0 locally. Almost all required dependencies are in Debian already, except python-pyutil (ITP #1029567) which I have uploaded to

Bug#1053489: ITP: scikit-build-core -- Python package build systems and CMake integration

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: scikit-build-core Version : 0.5.1 Upstream Author : Henry Schreiner * URL : https://github.com/scikit-build/scikit-build-core * License : Apache-2.0 Programming Lang: Python

Bug#1052636: ITP: tuning-library -- Surge Synth Team Tuning Library

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1025206 by -1 * Package name: tuning-library Version : 1.1.0+ds Upstream Author : Paul Walker * URL : https://github.com/surge-synthesizer/tuning-library * License : Expat Programming

Bug#1052621: ITP: mts-esp -- microtuning support to audio and MIDI plugins

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1025206 by -1 * Package name: mts-esp Version : 0.0~git20230110.9df9a9c Upstream Author : ODDSound Ltd. * URL : https://github.com/ODDSound/MTS-ESP * License : 0BSD Programming Lang: C

Bug#1025206: bespoke: RFP -> ITP

Control: retitle -1 ITP: bespokesynth -- modular music synthesizer Control: owner -1 ! Hello, I managed to successfully build bespokesynth, thus I am taking ownership of this RFP. Andrius

Bug#970575: pytorch-geometric: RFP -> ITP

Control: retitle -1 ITP: pytorch-geometric -- Geometric Deep Learning Control: owner -1 ! Hello, I managed to successfully build pytorch-geometric. Will upload soon. Andrius

Bug#1052148: ITP: pytorch-cluster -- PyTorch extension library of optimized graph cluster algorithms

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 970575 by -1 * Package name: pytorch-cluster Version : 1.6.1 Upstream Author : Matthias Fey * URL : https://github.com/rusty1s/pytorch_cluster * License : Expat Programming Lang: C

Bug#1043349: RFA: node-assume -- Expect-like assertions that work in node and the browser

Package: wnpp Hello, I would like to pass the maintenance of node-assume to someone more motivated. The package is in good shape. I sponsored its initial upload, but in the end I did not use it. Now it seems to be used by a bunch of node-* packages. Package description from debian/control:

Bug#976981: Bug#1042574: RM: theano, keras, deepnano -- RoM (theano), broken by numpy 1.24, theano mostly abandoned upstream

On 2023-07-30 18:35, Rebecca N. Palmer wrote: theano's reverse dependencies (keras and deepnano) are both also broken by this.  keras _also_ has apparently unrelated problems, #1026738, and is orphaned, #1027938. This was previously discussed in #1027215 (on, among others, deepnano's team lis

Bug#976981: Bug#1042574: RM: theano, keras, deepnano -- RoM (theano), broken by numpy 1.24, theano mostly abandoned upstream

Hi, On 2023-07-30 18:35, Rebecca N. Palmer wrote: theano has been mostly abandoned upstream since 2018.  (The Aesara fork is not abandoned, but includes interface changes including the import name, so would break reverse dependencies not specifically altered to use it.  Neither of the two in D

Bug#1039466: ITP: frugally-deep -- use Keras models in C++

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: frugally-deep Version : 0.15.20 Upstream Author : Tobias Hermann * URL : https://github.com/Dobiasd/frugally-deep * License : Expat Programming Lang: C++ Description : use Keras

Bug#1039462: ITP: functionalplus -- helpers to write concise and readable C++ code

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: functionalplus Version : 0.2.18 Upstream Author : Tobias Hermann and the FunctionalPlus contributors * URL : https://github.com/Dobiasd/FunctionalPlus * License : BSL-1.0 Programming

Bug#1036966: ITP: chemonomatopist -- derive IUPAC systematic names for chemical structures

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: chemonomatopist Version : 0.4.0 Upstream Author : Andrius Merkys, Miglė Urbonaitė * URL : https://github.com/merkys/ChemOnomatopist * License : BSD-3-Clause Programming Lang: Perl

Bug#1002470:

On 2023-05-27 14:54, Fioddor Superconcentrado wrote: Any update here? Some additional details. The package builds and installs successfully, and I have collected the required build dependencies to debian/control. I did not do anything about the server, though. The upstream provides their own

Bug#1002470:

https://salsa.debian.org/users/merkys-guest/projects <https://salsa.debian.org/users/merkys-guest/projects> or https://salsa.debian.org/users/merkys/projects <https://salsa.debian.org/users/merkys/projects>) You are right, it has not been pushed. Now I have pushed it to: https://salsa.

Bug#1031713: ITP: python-klein -- micro-framework for developing web services with Python

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block -1 by 995352 * Package name: python-klein Version : 21.8.0 Upstream Author : Aaron Gallagher et al. * URL : https://github.com/twisted/klein * License : Expat Programming Lang: Python

Bug#1031491: ITP: libmusic-chord-namer-perl -- given notes, return the best chord name

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: libmusic-chord-namer-perl Version : 0.01 Upstream Author : Jimi-Carlo Bukowski-Wills * URL : https://metacpan.org/release/Music-Chord-Namer * License : Artistic Programming Lang: Perl

Bug#1021041: ITP: parallel-hashmap --

Hi Steffen, On Fri, 30 Sep 2022 23:50:47 +0200 Steffen Moeller wrote: Subject: ITP: parallel-hashmap -- Package: wnpp Owner: Steffen Moeller Severity: wishlist I found your ITP and initial packaging for parallel-hashmap. I need this library to package pytorch-sparse (#1031265). Is it OK i

Bug#1031272: ITP: pytorch-scatter -- PyTorch Extension Library of Optimized Scatter Operations

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1031265 by -1 * Package name: pytorch-scatter Version : 2.1.0 Upstream Author : Matthias Fey * URL : https://github.com/rusty1s/pytorch_scatter * License : Expat Programming Lang: C

Bug#1031265: ITP: pytorch-sparse -- PyTorch Extension Library of Optimized Autograd Sparse Matrix Operations

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 970575 by -1 Control: block -1 by 1021041 * Package name: pytorch-sparse Version : 0.6.16 Upstream Author : Matthias Fey * URL : https://github.com/rusty1s/pytorch_sparse * License : Expat

Bug#1031205: ITP: libmusic-scales-perl -- supply necessary notes/offsets for musical scales

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: libmusic-scales-perl Version : 0.07 Upstream Author : Ben Daglish * URL : https://metacpan.org/release/Music-Scales * License : Artistic or GPL-1+ Programming Lang: Perl Description

Bug#1030247: ITP: libtext-names-perl -- module for proper name parsing, normalization, recognition and classification

Hi Mason, On 2023-02-01 17:04, m...@kohaaloha.com wrote: Text::Namess provides a number of name normalization routines, plus ^ Letter 's' is duplicated (Namess) in package description in debian/control. Best, Andrius

Bug#1030296: ITP: libobject-extend-perl -- add and override per-object methods

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: libobject-extend-perl Version : 0.4.0 Upstream Author : chocolateboy * URL : https://metacpan.org/release/Object-Extend * License : Artistic Programming Lang: Perl Description

Bug#1029765: ITP: python-tubes -- data-processing and flow-control engine for event-driven programs

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: python-tubes Version : 0.2.1 Upstream Author : Allen Short * URL : https://github.com/twisted/tubes * License : Expat Programming Lang: Python Description : data-processing and

Bug#930578: #930578: ITP: txi2p -> RFP: txi2p

Control: retitle -1 RFP: txi2p -- I2P bindings for Twisted Control: noowner ! On Wed, 13 Oct 2021 09:28:28 +0300 Andrius Merkys wrote: Control: retitle -1 ITP: txi2p -- I2P bindings for Twisted Control: owner -1 ! Control: tags -1 + patch Since tahoe-lafs does not need this anymore (replaced

Bug#995352: tahoe-lafs: progress

Hello, I have achieved some progress in packaging tahoe-lafs 1.17.0 locally. Almost all required dependencies are in Debian already, except python-pyutil (ITP #1029567) which I have uploaded to NEW and python-collections-extended (ITP #1029488) which is a bit more problematic due to failing t

Bug#1029567: ITP: python-pyutil -- library of useful Python functions and classes

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 995352 by -1 * Package name: python-pyutil Version : 0.0~git20221225.46c0611 Upstream Author : tpltnt * URL : https://github.com/tpltnt/pyutil * License : GPL-2.0+ or SPL-1+ or TGPPL-1.0

Bug#1029488: ITP: python-collections-extended -- Extra Python Collections - bags, setlists, RangeMap and IndexedDict

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 995352 by -1 * Package name: python-collections-extended Version : 2.0.2 Upstream Author : Michael Lenzen * URL : https://github.com/mlenzen/collections-extended * License : Apache-2.0

Bug#1029229: Relationship between txi2p and python-txi2p-tahoe

Hello, tahoe-lafs maintainers have forked txi2p (ITP #930578) as txi2p-tahoe (ITP #1029229) to have Python 3 support which is unavailable in the original txi2p. Therefore I intend to package txi2p-tahoe as src:python-txi2p-tahoe in Debian to provide the missing dependency for tahoe-lafs. Bo

Bug#1029229: ITP: python-txi2p-tahoe -- txi2p is a set of I2P bindings for Twisted

Package: wnpp Owner: Andrius Merkys Control: unblock 995352 by 930578 Control: block 995352 by -1 Severity: wishlist * Package name: python-txi2p-tahoe Version : 0.3.7 Upstream Author : Aaron Gallagher <_...@habnab.it> * URL : https://github.com/tahoe-lafs

Bug#1002470: opensearch: RFP -> ITP

Control: retitle -1 ITP: opensearch -- search engine, fork of Elasticsearch Control: owner -1 ! Hello, I had some success in building OpenSearch with Debian-provided dependencies. Some parts of the source had to be skipped, but not much. I will push my packaging to salsa once I figure out the

Bug#1013214: O: asmjit -- Complete x86/x64 JIT and AOT Assembler for C++

On 2022-12-19 20:26, M. Zhou wrote: Sure, just do whatever you see appropriate, since you are the\ future maintainer 😄 Thanks for taking it over! Great, thank you! Best wishes, Andrius

Bug#1013214: O: asmjit -- Complete x86/x64 JIT and AOT Assembler for C++

Hi, On Sat, 18 Jun 2022 20:04:05 -0700 "M. Zhou" wrote: I intend to orphan the asmjit package. I would like to adopt the package inside Debian Deep Learning Team. However, I would drop the artificial shared library as asmjit is explicitly unstable [1]. Is it OK? [1] https://bugs.debian.or

Bug#971356: ITA: python-redmine -- Python library for the Redmine RESTful API (Python 3)

Hi Matt, On Thu, 16 Jun 2022 17:30:49 -0400 Matt Barry wrote: retitle -1 ITA python-redmine -- Python library for the Redmine RESTful API (Python 3) thanks I understand this as your intent to adopt python-redmine (your email probably was intended to control@ rather than 971356@). Are you st

Bug#1025306: ITP: carrotsearch-procfork -- process forking/killing utility

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1020551 by -1 * Package name: carrotsearch-procfork Version : 1.0.6~git20211215.86e726d+ds Upstream Author : Dawid Weiss * URL : https://github.com/carrotsearch/procfork * License : BSD-3

Bug#1020551: RFP: lucene9 -- full-text search engine library for Java

Hello, Buildsystem is Gradle. Nevertheless, I had some success in building lucene9 using plain javahelper: $ find . -name module-info.java | xargs rm $ CLASSPATH=/usr/share/java/junit4.jar:/usr/share/java/randomizedtesting-runner.jar:/usr/share/java/spatial4j.jar:/usr/share/java/antlr4-runtim

Bug#1013214: O: asmjit -- Complete x86/x64 JIT and AOT Assembler for C++

Hello, I have stumbled upon asmjit while packaging openmm. Asmjit is also embedded at least in erlang and mame [1], thus packaging it might be a good idea. However, asmjit is not yet stable [2], thus the shared library approach might not be appropriate: breaking changes will interfere with sh

Bug#1022157: ITP: python-mpiplus -- Python GPU framework for alchemical free energy calculations

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: python-mpiplus Version : 0.0.1 Upstream Author : Chodera Lab * URL : https://github.com/choderalab/mpiplus * License : Expat Programming Lang: Python Description : Python GPU

Bug#1022000: ITP: clipper -- Cross-platform clipboard access in Go

Hi, On Wed, 19 Oct 2022 00:12:23 +0530 rajudev wrote: * Package name    : clipper This source package name clashes with already existing clipper package in Debian Science. Andrius

Bug#897673: coot packaging: update

Hello, I gave coot 1.0.05 a try. The package builds successfully, but is not installable as some of the code still is in Python2. Andrius

Bug#1021395: ITP: jumbo -- Java library for processing CML

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: jumbo Version : 6.0 Upstream Author : Peter Murray-Rust et al. * URL : https://github.com/BlueObelisk/jumbo6 * License : Apache-2.0 Programming Lang: Java Description : Java

Bug#944785: pufferfish wants to link with twopaco and ntcard

Hi Andreas, On 2022-10-04 12:54, Andreas Tille wrote: Am Tue, Oct 04, 2022 at 10:38:01AM +0300 schrieb Andrius Merkys: Alas, I did not get far. Static libraries for ntcard and twopaco are easy to add (I have pushed 'static-library' branches to salsa for these packages). However, puff

Bug#1021296: ITP: chemicaltagger -- tool for semantic text-mining in chemistry

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: chemicaltagger Version : 1.6.2 Upstream Author : Lezan Hawizy, David M. Jessop, Daniel Lowe and Peter Murray-Rust * URL : https://github.com/BlueObelisk/chemicaltagger * License : Apache

Bug#1014815: kiwipy initial packaging

Hi Bastian, On 2022-10-04 02:12, Bastian Germann wrote: > What is the status on kiwipy? For some time kiwipy was blocked by pytray, but pytray is in unstable now. I will revisit kiwipy. Best, Andrius

Bug#944785: pufferfish wants to link with twopaco and ntcard

Hi, On 2022-10-03 18:32, Andreas Tille wrote: > My main motivation to start ntcard and twopaco packages was to avoid > code duplication in pufferfish. I admit it seems I faild in doing this > sensibly to forget creating a library package. Simply do whatever > brings you forward with pufferfish a

Bug#944785: pufferfish wants to link with twopaco and ntcard

Hello, twopaco has entered testing (yay!), thus I gave its reverse dependency, pufferfish (ITP bug #944785), a look. pufferfish carries embedded copies of twopaco and ntcard with a modified build system to create static (or is it shared?) libraries for these two and then links pufferfish with them

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-30 17:18, Evgeny Posenitskiy wrote: >> Please fix the remaining issue with lintian overrides. After that I will >> upload the package to NEW. > > Done, thank a lot for debugging the issues! Looking forward to > apt-get-ing the libtrexio :-) Great, thanks! Actually, it is st

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-30 14:00, Evgeny Posenitskiy wrote: > Regarding the lintian errors, I have not observed the ones that you > reported on my machine. Just in case, I have lintian v2.62.0ubuntu2.1. > The 2 warnings that I had and decided to ignore before uploading on Salsa: > > W: libtrexio-de

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-29 18:18, Evgeny Posenitskiy wrote: > Thank you for the prompt and detailed reply! Thanks for prompt action! I will omit parts of your reply that are done. >> 3. I see your debian/copyright is very detailed. This is not a >> disadvantage, but maintaining such level of detai

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-29 13:35, Evgeny Posenitskiy wrote: > I have requested access to the Debichem on GitLab (pending) and pushed > the libtrexio package here: https://salsa.debian.org/q-posev/libtrexio . > The contents of the debian/ folder were produced by following your guide > and fixing some

Bug#1020896: ITP: python-pymbar -- Python implementation of the multistate Bennett acceptance ratio (MBAR)

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: python-pymbar Version : 3.1.0 Upstream Author : Michael R. Shirts, John D. Chodera * URL : https://simtk.org/home/pymbar * License : Expat Programming Lang: Python Description

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-27 14:43, Evgeny Posenitskiy wrote: > I think that my package is now ready to be published. Where can I ask > for sponsorship? The common way is to open a RFS (request for sponsor) bug report, similarly like you did for this ITP. I could in principle sponsor your package. H

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi Evgeny, On 2022-09-26 16:49, Evgeny Posenitskiy wrote: > Thanks! Following the Upstream Guide I should probably precise the > following: > >   - I forgot to provide a link to the the distribution tarball of trexio > 2.2.0 produced by `make distcheck`: > https://github.com/TREX-CoE/trexio/relea

Bug#1020772: ITP: trexio -- TREX I/O library and data format to exchange the quantum chemistry data.

Hi, Thanks for an interesting ITP. On 2022-09-26 15:58, Evgeny wrote: > As this is my first packaging attempt, I do not know about the best practices > and would > appreciate any piece of advice. I noticed you are also the upstream of this package. I believe Debian Upstream Guide could be of u

Bug#1020557: ITP: xtb -- semiempirical extended tight-binding program package

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: xtb Version : 6.5.1 Upstream Author : Sebastian Ehlert * URL : https://github.com/grimme-lab/xtb * License : LGPL-3+ Programming Lang: C, Fortran Description : semiempirical

Bug#1020551: RFP: lucene9 -- full-text search engine library for Java

Package: wnpp Severity: wishlist Control: block -1 by 1002470 Lucene 9 is available [1], it is needed to package OpenSearch (ITP bug #1002470). [1] https://lucene.apache.org Andrius

Bug#1019958: ITP: mctc-lib -- modular computation tool chain library

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: mctc-lib Version : 0.3.1 Upstream Author : Sebastian Ehlert * URL : https://github.com/grimme-lab/mctc-lib * License : Apache-2.0 Programming Lang: Fortran Description : modular

Bug#1019890: ITP: oxdna-cuda -- coarse-grained simulation software for DNA, RNA, and related systems

Hi Constantine, On 2022-09-15 19:03, Constantine Evans wrote: > oxDNA is a simulation code that was initially conceived as an > implementation of the coarse-grained DNA model introduced by > T. E. Ouldridge, J. P. K. Doye and A. A. Louis. It has been since > reworked and it is now an extensible si

Bug#1019241: ITP: coma -- detect distant protein evolutionary relationships

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: coma Version : 1.10+git20201228.c4add90+ds Upstream Author : Mindaugas Margelevičius * URL : https://github.com/minmarg/coma * License : CC-BY-NC-3.0-Unported Programming Lang: C

Bug#974154: ocrad: RFA -> ITA

control: retitle -1 ITA: ocrad -- optical character recognition program control: owner -1 ! Hello, I would like to adopt ocrad. Best, Andrius

Bug#682760: osra: RFP -> ITP

control: retitle -1 ITP: osra -- optical structure recognition control: owner -1 ! Hello, I have made considerable progress in packaging osra. Thus I am taking on the ITP. I will push my packaging changes to salsa soon. Andrius

Bug#974153: RFA: gocr -- Command line OCR

Hi Gürkan, On Tue, 10 Nov 2020 20:11:35 +0100 =?UTF-8?Q?G=C3=BCrkan_Myczko?= wrote: > I request an adopter for the gocr package. I am interested in gocr as a reverse dependency for osra (#682760). I have recently filed a pair of bugs against gocr blocking osra. I am now expressing my wish to ado

Bug#1017505: ITP: lightdock -- protein-protein, protein-peptide and protein-DNA docking framework

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block -1 by 1016888 * Package name: lightdock Version : 0.9.2 Upstream Author : LightDock developers * URL : https://github.com/lightdock/lightdock * License : GPL-3 Programming Lang: Python

Bug#1017000: ITP: cpptraj -- fast, parallelized molecular dynamics trajectory data analysis

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1016952 by -1 * Package name: cpptraj Version : 5.1.0 Upstream Author : Daniel R. Roe * URL : https://github.com/Amber-MD/cpptraj * License : GPL-3+ Programming Lang: C++ Description

Bug#1016952: ITP: gmx-mmpbsa -- end-state free energy calculations with GROMACS files

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block -1 by 1015857 * Package name: gmx-mmpbsa Version : 1.5.6+ds Upstream Author : Mario S. Valdes-Tresanco and Mario E. Valdes-Tresanco * URL : https://valdes-tresanco-ms.github.io

Bug#1016906: ITP: weblogo -- Sequence Logo Generator

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: weblogo Version : 3.7.12 Upstream Author : Gavin E. Crooks et al. * URL : https://github.com/WebLogo/weblogo * License : Expat Programming Lang: Python Description : Sequence Logo

Bug#1016888: ITP: prody -- Python package for protein dynamics analysis

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: prody Version : 2.2.0 Upstream Author : James Krieger et al. * URL : https://github.com/prody/ProDy * License : Expat Programming Lang: Python Description : Python package for

Bug#1015857: ITP: parmed -- parameter and topology file editor and molecular mechanical simulator

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: parmed Version : 3.4.3 Upstream Author : Dwight Mcgee, Bill Miller III, and Jason Swails * URL : https://parmed.github.io/ParmEd/html/index.html * License : GPL-2+ Programming Lang

Bug#1014815: kiwipy initial packaging

Hi Guilherme, On 2022-07-12 17:43, Guilherme de Paula Xavier Segundo wrote: Cool, I'll review your previous packaging, it will be a pleasure. You can be sure it will help and I thank you for your help. Good to hear! Initially what caught my attention was that it was a Python package. Current

Bug#1014815: kiwipy initial packaging

Hi Guilherme, On 2022-07-12 17:21, Guilherme de Paula Xavier Segundo wrote: Thank you for your contact. I started kiwipy packaging. But it's okay to give you the ITP. Do you want me to give you the ITP? If not, I will follow the packaging and keep the package on the team. At the moment I'm not

Bug#1014815: kiwipy initial packaging

Hello, I have pushed my initial packaging of kiwipy to salsa [1]. Everyone in Python Team are welcome to contribute. [1] https://salsa.debian.org/python-team/packages/python-kiwipy Best, Andrius

Bug#962932: ITP: plumpy -- Python workflows library

Control: retitle -1 ITP: python-plumpy -- Python workflows library Hi Bastian, On 2022-07-11 22:28, Bastian Germann wrote: On Tue, 16 Jun 2020 07:56:34 +0300 mer...@debian.org wrote: plumpy is required by aiida-core (ITP #901392). However, packaging of plumpy is currently blocked by its incomp

Bug#1014513: ITP: pdb-tools -- tools for manipulating and editing PDB files

Package: wnpp Owner: Andrius Merkys Severity: wishlist Control: block 1014457 by -1 * Package name: pdb-tools Version : 2.5.0 Upstream Author : João Pedro Rodrigues * URL : https://www.bonvinlab.org/pdb-tools/ * License : Apache-2.0 Programming Lang: Python

Bug#1014457: ITP: haddock3 -- High Ambiguity Driven biomolecular DOCKing

Package: wnpp Owner: Andrius Merkys Severity: wishlist * Package name: haddock3 Version : 3.0.0~beta.2 Upstream Author : Alexandre Bonvin * URL : https://github.com/haddocking/haddock3 * License : Apache-2.0 Programming Lang: Python Description : High

Bug#682760: Revisiting osra

Hello, I have revisited building osra v2.1.3. There seems to be an issue with outdated Autoconf directives now. I have filed an upstream ticket about it [1]. [1] https://sourceforge.net/p/osra/bugs/20/ Best, Andrius

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