Re: which command I should use to output sequentially,

2011-07-27 Thread Ivan Shmakov
> lina writes: […] > May I ask further, which is the best (systematic) way of learning the > script, based on all your experience. Personally, my own way of learning Shell was hardly a “systematic” one. However, just for the record, I've used the GNU bash manual

Re: which command I should use to output sequentially,

2011-07-27 Thread lina
On Wed, Jul 27, 2011 at 5:33 PM, shawn wilson wrote: > Which 'script' are you referring to? > > If it is bash, I'll refer you to the 50 page monolith of a man page for that > (a must read whatever you do anyway imo) > > If you're referring to something else...? Those are something I even don't kno

Re: which command I should use to output sequentially,

2011-07-27 Thread shawn wilson
Which 'script' are you referring to? If it is bash, I'll refer you to the 50 page monolith of a man page for that (a must read whatever you do anyway imo) If you're referring to something else...? If you are in fact dealing with scientific data, I think the bioperl.orgpage is a good starting poi

Re: which command I should use to output sequentially,

2011-07-27 Thread lina
Thanks for all. May I ask further, which is the best (systematic) way of learning the script, based on all your experience. Welcome any advice, Thanks with regards, lina On Wed, Jul 27, 2011 at 4:54 PM, shawn wilson wrote: > > On Jul 27, 2011 4:28 AM, "Ivan Shmakov" wrote: >> >> > shawn

Re: which command I should use to output sequentially,

2011-07-27 Thread shawn wilson
On Jul 27, 2011 4:28 AM, "Ivan Shmakov" wrote: > > > shawn wilson writes: > > However, I'd look at some of the bio perl modules if this was the > > type of data I was looking at. Either way, learning dozens of tools > > to manipulate lots of data is quite time consuming, prone to failure

Re: which command I should use to output sequentially,

2011-07-27 Thread Ivan Shmakov
> shawn wilson writes: > On Jul 27, 2011 3:44 AM, "Ivan Shmakov" wrote: […] >> While I've little to say about using a database for this case, I'd >> strongly recommend /against/ using any office-like solutions for >> data processing, as these are generally overweight and rarely >> c

Re: which command I should use to output sequentially,

2011-07-27 Thread shawn wilson
On Jul 27, 2011 3:44 AM, "Ivan Shmakov" wrote: > > > shawn wilson writes: > > […] > > > Might I recommend a plethora of free database solutions available to > > you? I see this type of question quite frequently and am stunned to > > see such a thing here (or on other mailing lists for pla

Re: which command I should use to output sequentially,

2011-07-27 Thread Ivan Shmakov
> shawn wilson writes: […] > Might I recommend a plethora of free database solutions available to > you? I see this type of question quite frequently and am stunned to > see such a thing here (or on other mailing lists for platforms just a > poorly suited for such data). I'm not sure wh

Re: which command I should use to output sequentially,

2011-07-27 Thread shawn wilson
Might I recommend a plethora of free database solutions available to you? I see this type of question quite frequently and am stunned to see such a thing here (or on other mailing lists for platforms just a poorly suited for such data). I'm not sure what your data is from or what it is for but I a

Re: which command I should use to output sequentially,

2011-07-26 Thread Ivan Shmakov
> lina writes: > On Wed, Jul 27, 2011 at 1:36 PM, Ivan Shmakov wrote: […] >> $ sed -e 's/^\(\s*\w\+\s\+[^0-9[:blank:]]\+\)\([[:digit:]]\+\)/\1 \2/' \ >> | sort -nk 3,3 -k1,1 \ >> | sed -e 's/^\(\s*\w\+\s\+[^0-9[:blank:]]\+\)\s\([[:digit:]]\+\)/\1\2/' > Thanks, but there i

Re: which command I should use to output sequentially,

2011-07-26 Thread lina
On Wed, Jul 27, 2011 at 1:36 PM, Ivan Shmakov wrote: >> lina   writes: > >        First of all, a kindly reminder: there's a news:comp.unix.shell >        newsgroup (also available via Google Groups [1], though a proper >        newsreader software is recommended), with a few truly >        kn

Re: which command I should use to output sequentially,

2011-07-26 Thread Ivan Shmakov
> lina writes: First of all, a kindly reminder: there's a news:comp.unix.shell newsgroup (also available via Google Groups [1], though a proper newsreader software is recommended), with a few truly knowledgeable folks among the subscribers, which such question

Re: which command I should use to output sequentially,

2011-07-26 Thread lina
I just remember the sort command, but I still don't know how to get the ideal one, after I tried the sort -n -k2 , something changed on field 2 but it's still a bit away from the one I need. I attached the text, Thanks, 238CHO C10 3617 1.697 5.334 9.317 238CHO C11 3624 1.665