Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Andreas Tille
Hi Ludovic, On Thu, Apr 21, 2011 at 12:33:43AM +0200, Ludovic Claude wrote: > > The mh_make command worked quite well on my computer. As it uses > subversion to download the sources, check that it's installed on your > computer as well. For sure I have installed subversion. :-) > Here is my fu

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Andreas Tille
On Wed, Apr 20, 2011 at 08:28:45PM -0400, Jeff Buchbinder wrote: > Another way of dealing with it is simply caching all of the required > packages locally, then doing something like this: > > find . | grep debian/.m2 | grep jar$ | cut -d/ -f2- > > debian/source/include-binaries > > to cache all

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Andreas Tille
On Wed, Apr 20, 2011 at 06:32:53PM -0500, Tim O'Brien wrote: > What's the deal with rewriting all these POMs? I removed maven-javadoc-plugin from all pom.xml files because otherwise the build process failed much earlier. This was the only motivation. Any better way to proceed to the same state in

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Jeff Buchbinder
I pushed a working copy (though possibly not a very "elegant" packaging) here: https://launchpad.net/~rufustfirefly/+archive/ppa/+buildjob/2489799/+files/shim_0.1.1-1ubuntu2~maverick_all.deb which is available through my PPA (and will be available shortly in the Debian Med one as well). -- Than

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Jeff Buchbinder
On Wed, Apr 20, 2011 at 7:32 PM, Tim O'Brien wrote: > Why has this community taken the repository and made it so damn > confusing?   What's the deal with rewriting all these POMs? Another way of dealing with it is simply caching all of the required packages locally, then doing something like this

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Tim O'Brien
Why has this community taken the repository and made it so damn confusing? What's the deal with rewriting all these POMs? Tim O'Brien On Wed, Apr 20, 2011 at 4:38 PM, Nicholas Bamber wrote: > I am also finding java packaging frustrating. I;'ve hit the problem that > maven-ant-tasks needed upgr

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Ludovic Claude
Hello Andreas, The mh_make command worked quite well on my computer. As it uses subversion to download the sources, check that it's installed on your computer as well. Here is my full session with mh_make: http://paste.ubuntu.com/596728/ There are some dependencies which don't seem to have Debi

Re: Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Nicholas Bamber
I am also finding java packaging frustrating. I;'ve hit the problem that maven-ant-tasks needed upgraded. Then I hit the problem that maven-invoker-plugin. Now I am stuck. On 20/04/11 22:08, Andreas Tille wrote: Hi Jeff, thanks for pushing me a bit - I did not forgot your request, but somehow

Re: genome annotation program to add to list

2011-04-20 Thread George Marselis
Hmmm, i just tried to check out the list. svn.debian.org asked me for a password, but I do not think I have a password there yet. How do I get an account on that host? attached is my public ssh key, in case you need it. On Sat, Apr 16, 2011 at 3:27 AM, Charles Plessy wrote: > Le Fri, Apr 15, 201

Next Maven problem (Was: Medical device support for GNUmed)

2011-04-20 Thread Andreas Tille
Hi Jeff, thanks for pushing me a bit - I did not forgot your request, but somehow there are several tasks at the same time. As far as I understood the build process in Debian using maven and maven-debian-helper there is a chance to avoid the "nasty habit of requiring access to the outside world".

Re: Is there a wiki I can keep notes for applications I install/package?

2011-04-20 Thread Andreas Tille
On Wed, Apr 20, 2011 at 03:58:42PM +0300, George Marselis wrote: > Missed that part! but hey, it means i might actually get out of work > today before 9pm! Uhmmm, no. You have promissed to update the tasks file for about 5 new programs. Just do this now after somebody else did your work. :-) ..

Re: Is there a wiki I can keep notes for applications I install/package?

2011-04-20 Thread George Marselis
Missed that part! but hey, it means i might actually get out of work today before 9pm! Go debian! great job guys! On Wed, Apr 20, 2011 at 3:48 PM, Andreas Tille wrote: > Hi George, > > regarding GMOD:  I hope you just realised that one part "The GMOD > Generic Genome Browser" gbrowse is now pack

Re: Is there a wiki I can keep notes for applications I install/package?

2011-04-20 Thread Andreas Tille
Hi George, regarding GMOD: I hope you just realised that one part "The GMOD Generic Genome Browser" gbrowse is now packaged and available in Debian unstable. Kind regards Andreas. On Tue, Apr 19, 2011 at 01:45:48PM +0300, George Marselis wrote: > Hey guys, > > I am working on GMOD ( htt

Re: Most of the packages done in the sprint and as a indirect consequence of the sprint are in

2011-04-20 Thread Andreas Tille
On Wed, Apr 20, 2011 at 01:23:16PM +0100, William Spooner wrote: > Great topic for a blog post. Do we have a list of those packages? I'm happy > to knock some text together. For a start you could use my report under http://wiki.debian.org/DebianMed/Meeting/Luebeck2011#Results Usually I would

Re: Most of the packages done in the sprint and as a indirect consequence of the sprint are in

2011-04-20 Thread William Spooner
On 20 Apr 2011, at 09:08, Andreas Tille wrote: > Hi, > > I'm quite proud to say that we now managed to get most of those packages > we started working in the Debian Med sprint in Travemünde have now hit > unstable or experimental. That's really cool! Thanks to all who had > spend their time (s

What category for edfbrowser (Was: Bug#551045: ITP: edfbrowser -- a viewer for medical timeseries storage files)

2011-04-20 Thread Andreas Tille
Hi Bas, I just stumbled upon this nearly one year old posting. I have seen that edfbrowser had several updates and is actively maintained. However I wonder whether you might consider joining the Debian Med team anyway. >From your single posting to the list which I answered below I had the feelin

Re: Help from users needed (Was: Twitter and Social networks)

2011-04-20 Thread Andreas Tille
On Wed, Apr 20, 2011 at 10:55:38AM +0100, William Spooner wrote: > > In addition to automated updates, it would be nice to have debian-med related > commentary on the twitter feed; the launch of the blog, for example. Fully ACK. > I'm happy to post from time to time if you're happy for me to ha

Re: Help from users needed (Was: Twitter and Social networks)

2011-04-20 Thread William Spooner
On 20 Apr 2011, at 07:34, Andreas Tille wrote: > Hi Vanessa, > > On Tue, Apr 19, 2011 at 04:57:38PM -0300, vane...@gmail.com wrote: >> I was taking a look at some python libraries for twitter, they are pretty >> easy to use so making a script for automatically posting won't be a hard >> task. No

Most of the packages done in the sprint and as a indirect consequence of the sprint are in

2011-04-20 Thread Andreas Tille
Hi, I'm quite proud to say that we now managed to get most of those packages we started working in the Debian Med sprint in Travemünde have now hit unstable or experimental. That's really cool! Thanks to all who had spend their time (specifically Steffen for organising the sprint). One point I

Re: packaging libjai-imageio-java (was: Re: Hint needed for packaging library using maven)

2011-04-20 Thread Andreas Tille
[Keeping Debian Med list in full quote to give a status update] Hi Tony, thanks for your investigations into libjai-imageio-java. For the record: I pushed the packaging of the Debian Med target dcm4che[1a] - a collection of open source applications and utilities for the healthcare enterprise - up