On June 26, 2018 3:45:49 AM EDT, Andreas Tille wrote:
>On Mon, Jun 25, 2018 at 09:52:50AM -0400, Afif Elghraoui wrote:
>> I think we can give 1.5.0 a try, but it might have the same problem.
>
>Since it builds successfully I've just uploaded.
>
Ok
>> > (And what do you think about watch mod
On Mon, Jun 25, 2018 at 09:52:50AM -0400, Afif Elghraoui wrote:
> I think we can give 1.5.0 a try, but it might have the same problem.
Since it builds successfully I've just uploaded.
> > (And what do you think about watch mode=git?)
>
> I don't know much about it, but I don't have any strong
On June 25, 2018 5:07:48 AM EDT, Andreas Tille wrote:
>Hi Afif,
>
>On Mon, Jun 25, 2018 at 03:41:11AM -0400, Afif Elghraoui wrote:
>> >pbcore.io.dataset.DataSetIO: ERROR: Invalid file produced:
>> >/tmp/tmpveTAsa.subreadset.xml
>> >
>> >Before I start diving into this: Afif, upstream seems to
Hi Afif,
On Mon, Jun 25, 2018 at 03:41:11AM -0400, Afif Elghraoui wrote:
> >pbcore.io.dataset.DataSetIO: ERROR: Invalid file produced:
> >/tmp/tmpveTAsa.subreadset.xml
> >
> >Before I start diving into this: Afif, upstream seems to have released
> >1.5.0 which might be worth a try. While I asked
Hi, Andreas
On June 25, 2018 3:32:00 AM EDT, Andreas Tille wrote:
>Hi Graham,
>
>On Sun, Jun 24, 2018 at 08:48:32PM +0200, Graham Inggs wrote:
>> Control: tags -1 + patch
>
>thanks for the patch. Since we are targeting in Git at version 1.4.2 I
>adapted the patch to this version and it works for
Hi Graham,
On Sun, Jun 24, 2018 at 08:48:32PM +0200, Graham Inggs wrote:
> Control: tags -1 + patch
thanks for the patch. Since we are targeting in Git at version 1.4.2 I
adapted the patch to this version and it works for this. I also fixed
another issue in the test suite[1]. Unfortunately the
> Do you have any suggestions on how to deal with this?
i think you can either add the explicit versioned depends in
debian/control or instruct dh_python2 to add such a dependency.
--
Sandro "morph" Tosi
My website: http://sandrotosi.me/
Me at Debian: http://wiki.debian.org/SandroTosi
G+: https:
Processing control commands:
> tags -1 + patch
Bug #900485 [src:python-pbcore] python-pbcore: FTBFS and Debci failure with
NumPy 1.14
Added tag(s) patch.
--
900485: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=900485
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
Control: tags -1 + patch
Hi Sandro
I have cherry-picked the attached patch from pbcore upstream which
fixes the problems with NumPy 1.14.
However, with this patch in place, pbcore will need a build-dependency
on python-numpy (>= 1:1.14~) and its autopkgtests will fail with NumPy
1.13.
I thought
Processing control commands:
> forwarded -1 https://github.com/PacificBiosciences/pbcore/issues/115
Bug #900485 [src:python-pbcore] python-pbcore: FTBFS and Debci failure with
NumPy 1.14
Set Bug forwarded-to-address to
'https://github.com/PacificBiosciences/pbcore/issues/115'.
> tags -1 upstream
Control: forwarded -1 https://github.com/PacificBiosciences/pbcore/issues/115
Control: tags -1 upstream
Control: tags -1 help
Thanks for this bug report. I've forwarded the issue upsteam, Andreas.
--
http://fam-tille.de
Source: python-pbcore
Version: 1.2.11+dfsg-1
Severity: serious
User: debian...@lists.debian.org
Usertags: needs-update
Hi Maintainer
Since the recent upload of python-numpy on 2018-05-05, python-pbcore has
been failing its autopkgtests [1] and has now also started to FTBFS in
unstable [2] with
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