Bug#1102964: xraylarch: FTBFS in testing: intersphinx inventory '/usr/share/doc/python-numpy-doc/html/objects.inv' not fetchable due to : [Errno 2] No such file or directory

2025-04-25 Thread Andrey Rakhmatullin
On Sun, Apr 13, 2025 at 02:36:55PM +0200, Lucas Nussbaum wrote: larch/epics/xrfcontrol.py:13: in import wx /usr/lib/python3/dist-packages/wx/__init__.py:12: in __version__ = wx.__version__.VERSION_STRING E AttributeError: partially initialized module 'wx' from '/usr/lib/python3/dist-

Bug#1102961: genx: FTBFS in testing: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.13 --dir genx returned exit code 13

2025-04-25 Thread Andrey Rakhmatullin
For the record, I cannot reproduce this on current testing or unstable. I also tried "from genx import api; api.data_loader.d17_legacy" and that attrribute exists. -- WBR, wRAR signature.asc Description: PGP signature

Bug#1091947: python-click-option-group: FTBFS: FAILED tests/test_click_option_group.py::test_missing_group_decl_first_api

2025-04-24 Thread Andrey Rakhmatullin
On Sat, Mar 29, 2025 at 03:15:23PM -0400, Gabriel Filion wrote: The new release does not change much to the code semantically and pretty much only releases some maintenance to the code and upstream CI. 35 files changed, 1071 insertions(+), 669 deletions(-) I don't think this is acceptable du

Bug#1102967: python-booleanoperations: FTBFS in testing: KeyError: 'setuptools_scm'

2025-04-24 Thread Andrey Rakhmatullin
On Sun, Apr 13, 2025 at 02:25:17PM +0200, Lucas Nussbaum wrote: E First differing element 14: E ((250.0, 100.0), 'curve', True, None) E ((249.97, 100.0), 'curve', True, None) Well, it uses assertEqual on almost equal, but not exactly equal, floats. Not sure how go

Bug#1101258:

2025-04-03 Thread Andrey Rakhmatullin
On Sat, Mar 29, 2025 at 04:33:27PM -0400, Dave Vasilevsky wrote: user debian-rele...@lists.debian.org usertag 1101258 + bsp-2025-03-ca-montreal thank you Upstream seems to be aware of this: https://github.com/MagicStack/uvloop/issues/637 This looks unrelated. -- WBR, wRAR signature.asc Desc

Bug#1098875: python-ml-collections: autopkgtests fail: cp: cannot create regular file 'ml_collections/config_dict/tests/BUILD': No such file or directory

2025-02-25 Thread Andrey Rakhmatullin
Source: python-ml-collections Version: 1.0.0-1 Severity: serious https://ci.debian.net/packages/p/python-ml-collections/testing/amd64/58124703/ and can be reproduced locally. autopkgtest [17:00:47]: test run-unit-test: [--- cp: cannot create regular file 'ml_collections/config

Bug#1098247: joblib: autopkgtest failures against numpy2

2025-02-21 Thread Andrey Rakhmatullin
On Tue, Feb 18, 2025 at 11:49:35AM +0100, Emilio Pozuelo Monfort wrote: > === FAILURES > === > __ test_joblib_pickle_across_python_versions > ___ Its unclear to me in which circumstances does this fai

Bug#1095778: sympy: diff for NMU version 1.13.3-2.1

2025-02-16 Thread Andrey Rakhmatullin
On Sun, Feb 16, 2025 at 06:55:31PM +0100, Santiago Vila wrote: > I would like to do a proper team upload with your changes > (with attribution, of course). Can you help me by > answering a few simple questions? > > I believe this change: > > -export PYBUILD_TEST_ARGS=-k 'not (TestUpdateArgsWithPa

Bug#1095778: sympy: diff for NMU version 1.13.3-2.1

2025-02-14 Thread Andrey Rakhmatullin
025-02-03 14:03:29.0 +0500 +++ sympy-1.13.3/debian/changelog 2025-02-14 23:02:37.0 +0500 @@ -1,3 +1,11 @@ +sympy (1.13.3-2.1) unstable; urgency=medium + + * Non-maintainer upload. + * Fix running autopkgtests (Closes: #1095778). + * Fix building with the nodoc profile. + + -- Andrey Rak

Bug#1095096: seaborn: diff for NMU version 0.13.2-4.1

2025-02-14 Thread Andrey Rakhmatullin
ebian/changelog 2024-07-03 15:26:25.0 +0500 +++ seaborn-0.13.2/debian/changelog 2025-02-14 20:52:04.0 +0500 @@ -1,3 +1,10 @@ +seaborn (0.13.2-4.1) unstable; urgency=medium + + * Non-maintainer upload. + * Fix tests with NumPy 2.x (Closes: #1095096). + + -- Andrey Rakhmatullin Fri, 1

Bug#1095723: bmtk: FTBFS with numpy 2.x

2025-02-11 Thread Andrey Rakhmatullin
Source: bmtk Version: 1.1.1+ds-3 Severity: serious Tags: ftbfs User: debian-pyt...@lists.debian.org Usertags: numpy2 Control: block 1082237 by -1 Visible on https://ci.debian.net/packages/b/bmtk/testing/amd64/57584162/ but also happens during the package build. bmtk/simulator/filternet/lgnmodel/

Bug#1094326: pytorch-cuda: rebuild for libbenchmark transition required

2025-02-06 Thread Andrey Rakhmatullin
On Mon, Jan 27, 2025 at 09:15:06AM +0100, Sebastian Ramacher wrote: > Source: pytorch-cuda > Version: 2.5.1+dfsg-4 > Severity: serious > X-Debbugs-Cc: sramac...@debian.org > > pytorch-cuda is involved in the currently ongoing libbenchmark > transition and cannot be built on the buildds. Please reb

Bug#1095214: python3-pyopencl: uninstallable with the current version of python3-numpy

2025-02-06 Thread Andrey Rakhmatullin
On Wed, Feb 05, 2025 at 12:45:00PM +0100, Giacomo Mulas wrote: > Package: python3-pyopencl > Version: 2024.1-2 > Severity: grave > Justification: renders package unusable > > Dear Maintainer, > > with the release to unstable of the new version of python3-numpy > python3-pycuda became uninstallab

Bug#1095283: aubio: FTBFS on ppc64el and powerpc

2025-02-06 Thread Andrey Rakhmatullin
Source: aubio Version: 0.4.9-4.6 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=aubio&arch=ppc64el&ver=0.4.9-4.6&stamp=1738785077&raw=0 Two tests fail on both ppc64el and powerpc, for both Python versions (I wonder why only there). --

Bug#1095229: getfem: FTBFS on s390x

2025-02-05 Thread Andrey Rakhmatullin
Source: getfem Version: 5.4.4+dfsg1-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=getfem&arch=s390x&ver=5.4.4%2Bdfsg1-1&stamp=1738578561&raw=0 |A GMM error has been detected !!! | ==

Bug#1095105: python-biopython: FTBFS on s390x: ValueError: 1 Tutorial doctests failed: test_chapter_pdb_line_00071

2025-02-03 Thread Andrey Rakhmatullin
Source: python-biopython Version: 1.85+dfsg-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=python- biopython&arch=s390x&ver=1.85%2Bdfsg-1&stamp=1738546311&raw=0 ERROR: test_doctests (test_Tutorial.TutorialTestCase.test_doctests) Run tut

Bug#1095104: unyt: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: unyt Control: block 1082237 by -1 Version: 3.0.3-1 Severity: serious https://ci.debian.net/packages/u/unyt/testing/amd64/57457734/ AssertionError: Default value mismatch for argument 'a_min'. Helper has , target has -- WBR, wRAR signature.asc Description: PGP signature

Bug#1095100: tomopy: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: tomopy Control: block 1082237 by -1 Version: 1.15.0+ds1-9 Severity: serious https://ci.debian.net/packages/t/tomopy/testing/amd64/57457732/ ValueError: Unable to avoid copy while creating an array as requested. -- WBR, wRAR signature.asc Description: PGP signature

Bug#1095099: suitesparse: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: suitesparse Control: block 1082237 by -1 Version: 1:7.8.3+dfsg-2 Severity: serious https://ci.debian.net/packages/s/suitesparse/testing/amd64/57457729/ AttributeError: `np.Inf` was removed in the NumPy 2.0 release. Use `np.inf` instead. -- WBR, wRAR signature.asc Description: PGP sig

Bug#1095096: seaborn: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: seaborn Control: block 1082237 by -1 Version: 0.13.2-4 Severity: serious https://ci.debian.net/packages/s/seaborn/testing/amd64/57457726/ -- WBR, wRAR signature.asc Description: PGP signature

Bug#1095095: sasview: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: sasview Control: block 1082237 by -1 Version: 5.0.6-5 Severity: serious https://ci.debian.net/packages/s/sasview/testing/amd64/57457723/ sas.sascalc.dataloader.loader_exceptions.NoKnownLoaderException: ascii_reader: could not load file -- WBR, wRAR signature.asc Description: PGP sign

Bug#1095094: sasmodels: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: sasmodels Control: block 1082237 by -1 Version: 1.0.7-1 Severity: serious https://ci.debian.net/packages/s/sasmodels/testing/amd64/57457722/ AttributeError: `np.NaN` was removed in the NumPy 2.0 release. Use `np.nan` instead. -- WBR, wRAR signature.asc Description: PGP signature

Bug#1095093: sasdata: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: sasdata Version: 0.8.1-5 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/s/sasdata/testing/amd64/57457721/ AttributeError: `np.string_` was removed in the NumPy 2.0 release. Use `np.bytes_` instead. -- System Information: Debian Release: trixie/sid APT pr

Bug#1095092: pyusid: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: pyusid Version: 0.0.12-2 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/data/autopkgtest/testing/amd64/p/pyusid/57457718/log.gz AttributeError: module 'numpy' has no attribute 'product' -- System Information: Debian Release: trixie/sid APT prefers unstable APT

Bug#1095091: python-qmix: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: python-qmix Version: 1.0.6-10 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/p/python-qmix/testing/amd64/57457715/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimenta

Bug#1095090: python-pbcore: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: python-pbcore Version: 2.1.2+dfsg-10 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/p/python-pbcore/testing/amd64/57457712/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'e

Bug#1095089: python-hdf5storage: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: python-hdf5storage Version: 0.1.19-3 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/p/python-hdf5storage/testing/amd64/57452521/ AttributeError: `np.unicode_` was removed in the NumPy 2.0 release. Use `np.str_` instead. -- System Information: Debian Releas

Bug#1095088: python-deeptools: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: python-deeptools Version: 3.5.5+dfsg-1 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/p/python-deeptools/testing/amd64/57452520/ AttributeError: module 'numpy' has no attribute 'NAN' -- System Information: Debian Release: trixie/sid APT prefers unstable

Bug#1095085: pyrr: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: pyrr Version: 0.10.3-7 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/p/pyrr/testing/amd64/57452518/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental') Architectu

Bug#1095084: cython: autopkgtests fail with numpy 2.x

2025-02-03 Thread Andrey Rakhmatullin
Source: cython Version: 3.0.11+dfsg-1 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/c/cython/testing/amd64/57457706/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental')

Bug#1095029: nipype: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: nipype Version: 1.9.0-1 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/n/nipype/testing/amd64/57318668/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental') Archit

Bug#1095027: neo: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: neo Version: 0.13.4-1 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/n/neo/testing/amd64/57318667/ Several different failures. -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101

Bug#1095026: mdp: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: mdp Version: 3.6-9 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/m/mdp/testing/amd64/57318662/ AttributeError: `np.longfloat` was removed in the NumPy 2.0 release. Use `np.longdouble` instead. -- System Information: Debian Release: trixie/sid APT prefer

Bug#1095024: joblib: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: joblib Version: 1.3.2-6 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/j/joblib/testing/amd64/57318660/ AttributeError: `np.byte_bounds` was removed in the NumPy 2.0 release. Now it's available under `np.lib.array_utils.byte_bounds` -- System Information:

Bug#1095023: lmfit-py: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: lmfit-py Version: 1.2.2-4 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/l/lmfit-py/testing/amd64/57318661/ -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testing'), (101, 'experimental') Ar

Bug#1095022: fiat: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: fiat Version: 2019.2.0~git20210419.7d418fa-5 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/f/fiat/testing/amd64/57321987/ AttributeError: module 'numpy' has no attribute 'math'. Did you mean: 'emath'? -- System Information: Debian Release: trixie/sid AP

Bug#1095020: dolfin: autopkgtests fail with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: dolfin Version: 2019.2.0~legacy20240219.1c52e83-16 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/d/dolfin/testing/amd64/57313372/ ImportError: cannot import name 'float_' from 'numpy' (/usr/lib/python3/dist- packages/numpy/__init__.py). Did you mean: 'float

Bug#1095019: dask: autopkgtest failures with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: dask Version: 2024.12.1+dfsg-1 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/d/dask/testing/amd64/57321986/ E AttributeError: module 'numpy' has no attribute 'product' -- System Information: Debian Release: trixie/sid APT prefers unstable APT po

Bug#1094984: python-meshplex: FTBFS with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: python-meshplex Version: 0.17.1-4 Severity: serious Tags: ftbfs Control: block 1082237 by -1 Visible on https://ci.debian.net/packages/p/python- meshplex/testing/amd64/57299021/ but also fails during package build. _ ERROR collecting tests/test_remove_cells.py

Bug#1094985: python-meshio: FTBFS with numpy 2.x

2025-02-02 Thread Andrey Rakhmatullin
Source: python-meshio Version: 7.0.0-really-5.3.5-3 Severity: serious Tags: ftbfs Control: block 1082237 by -1 Visible on https://ci.debian.net/packages/p/python- meshio/testing/amd64/57299020/ but also happens during package build. FAILED tests/test_dolfin.py::test_dolfin[mesh3] - ValueError: co

Bug#1094905: hickle: FTBFS with numpy 2.x: Unable to avoid copy while creating an array as requested

2025-02-01 Thread Andrey Rakhmatullin
Source: hickle Version: 5.0.3-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 FAILED hickle/tests/test_03_load_builtins.py::test_load_hickle_4_0_X_string FAILED hickle/tests/test_03_load_builtins.py::test_listlike_dataset - ValueEr... FAILED hickle/tests/test_04_load_numpy.py::test_cr

Bug#1094808: mdanalysis: autopkgtests fail with numpy 2.x

2025-01-31 Thread Andrey Rakhmatullin
Source: mdanalysis Version: 2.7.0-5 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/m/mdanalysis/unstable/amd64/57222416/ Many different failures. -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable'), (500, 'testi

Bug#1094725: Missing dependency on python3-pkg-resources

2025-01-30 Thread Andrey Rakhmatullin
On Thu, Jan 30, 2025 at 11:58:58PM +0100, Alexandre Detiste wrote: > As I'm removing extraneous python3-pkg-resources > from some core package this kind of issues > will continue to pop up all over the place in leaf packages. > > Thanks for the swift handling ! > > Of course having more autopkgte

Bug#1094757: pybdsf: FTBFS with numpy 2.x: error: ‘PyArray_FLOAT’ undeclared

2025-01-30 Thread Andrey Rakhmatullin
Source: pybdsf Version: 1.12.0-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=pybdsf&arch=amd64&ver=1.12.0-1%2Bb1&stamp=1738252867&raw=0 /build/reproducible-path/pybdsf-1.12.0/natgrid/Src/natgridmodule.c: In function ‘nat_c_natgrids’: /

Bug#1094758: sep: FTBFS with numpy 2.x: 'int_t' is not a type identifier

2025-01-30 Thread Andrey Rakhmatullin
Source: sep Version: 1.2.1-7 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=sep&arch=amd64&ver=1.2.1-7%2Bb2&stamp=1738253327&raw=0 Error compiling Cython file: ... # Source Extr

Bug#1094728: phonopy: FTBFS with numpy 2.x

2025-01-30 Thread Andrey Rakhmatullin
Source: phonopy Version: 2.23.1-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 Noticed in https://ci.debian.net/packages/p/phonopy/testing/armel/57077514/ but fails even during build time on amd64. Many "AssertionError: Not equal to tolerance rtol=1e-07, atol=0.01" test failures.

Bug#1094725: Missing dependency on python3-pkg-resources

2025-01-30 Thread Andrey Rakhmatullin
Package: ariba Version: 2.14.7+ds-6 Severity: grave Installing ariba on a minimal system and running it: Traceback (most recent call last): File "/usr/bin/ariba", line 3, in import ariba File "/usr/lib/python3/dist-packages/ariba/__init__.py", line 1, in from pkg_resources import ge

Bug#1094713: mdtraj: autopkgtests fail with numpy 2.x

2025-01-30 Thread Andrey Rakhmatullin
Source: mdtraj Version: 1.10.1-2 Severity: serious Control: block 1082237 by -1 https://ci.debian.net/packages/m/mdtraj/testing/amd64/57221846/ "RuntimeError: Failed to converge after 50 iterations" "AssertionError: Dielectric tolerance not met!" -- System Information: Debian Release: trixie/si

Bug#1094706: xrayutilities: FTBFS with numpy 2.x: `np.asfarray` was removed in the NumPy 2.0 release

2025-01-30 Thread Andrey Rakhmatullin
Source: xrayutilities Version: 1.7.8-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=xrayutilities&arch=amd64&ver=1.7.8-1%2Bb3&stamp=1738068561&raw=0 -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy:

Bug#1094704: r-cran-fastcluster: FTBFS with numpy 2.x: tests failed

2025-01-30 Thread Andrey Rakhmatullin
Source: r-cran-fastcluster Version: 1.2.6-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=r-cran- fastcluster&arch=amd64&ver=1.2.6-1%2Bb3&stamp=1737989943&raw=0 File "/build/reproducible-path/r-cran- fastcluster-1.2.6/.pybuild/cpython3

Bug#1094701: pairtools: FTBFS on 32-bit with numpy 2.x: Python int too large to convert to C long

2025-01-30 Thread Andrey Rakhmatullin
Source: pairtools Version: 1.1.2-1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=pairtools&arch=armel&ver=1.1.2-1%2Bb1&stamp=1738148274&raw=0 File "/usr/lib/python3/dist-packages/numpy/lib/_index_tricks_impl.py", line 435, in __getitem

Bug#1094703: python-pomegranate: FTBFS with numpy 2.x: Error compiling Cython file

2025-01-30 Thread Andrey Rakhmatullin
Source: python-pomegranate Version: 0.14.8-7 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=python- pomegranate&arch=amd64&ver=0.14.8-7%2Bb1&stamp=1738064329&raw=0 Error compiling Cython file: -

Bug#1094702: python-ltfatpy: FTBFS with numpy 2.x: `np.unicode_` was removed in the NumPy 2.0

2025-01-30 Thread Andrey Rakhmatullin
Source: python-ltfatpy Version: 1.0.16-11 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=python- ltfatpy&arch=amd64&ver=1.0.16-11%2Bb1&stamp=1738067319&raw=0 -- System Information: Debian Release: trixie/sid APT prefers unstable APT

Bug#1094700: openmm: FTBFS with numpy 2.x: error: cannot convert ‘PyObject*’ {aka ‘_object*’} to ‘const PyArrayObject*’ {aka ‘const tagPyArrayObject_fields*’}

2025-01-30 Thread Andrey Rakhmatullin
Source: openmm Version: 8.1.2+dfsg-2 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=openmm&arch=amd64&ver=8.1.2%2Bdfsg-2%2Bb1&stamp=1737990080&raw=0 In file included from /usr/lib/x86_64-linux- gnu/python3-numpy/numpy/_core/include/numpy/

Bug#1094699: getfem: FTBFS with numpy 2.x: numpy.exceptions.AxisError

2025-01-30 Thread Andrey Rakhmatullin
Source: getfem Version: 5.4.2+dfsg1-5.1 Severity: serious Tags: ftbfs Control: block 1082237 by -1 https://buildd.debian.org/status/fetch.php?pkg=getfem&arch=amd64&ver=5.4.2%2Bdfsg1-5.1%2Bb2&stamp=1738030604&raw=0 Traceback (most recent call last): File "/build/reproducible- path/getfem-5.4.2+d

Bug#1094697: gemmi: FTBFS with numpy 2.x

2025-01-30 Thread Andrey Rakhmatullin
Source: gemmi Version: 0.6.5+ds-2 Severity: serious Tags: ftbfs Control: block -1 by 1082237 Can be seen on https://ci.debian.net/packages/g/gemmi/testing/amd64/57218911/ but also fails during package build. FAILED tests/test_hkl.py::TestMtz::test_f_phi_grid - AssertionError: False is... FAILED t

Bug#1094479: reassign 1094479 to src:ffc, affects 1094479, closing 1094479

2025-01-29 Thread Andrey Rakhmatullin
reassign 1094479 src:ffc 2019.2.0~legacy20230509.35df986-3 affects 1094479 src:dolfin close 1094479 2019.2.0~legacy20230509.35df986-4 thanks Indeed. -- WBR, wRAR

Bug#1094631: abydos: FTBFS with numpy 2.x

2025-01-29 Thread Andrey Rakhmatullin
Source: abydos Version: 0.5.0+git20201231.344346a-7 Severity: serious Tags: ftbfs Control: block -1 by 1082237 Can be seen at https://ci.debian.net/packages/a/abydos/testing/amd64/57066953/ but the same tests fail during build. File "/build/reproducible- path/abydos-0.5.0+git20201231.344346a/.p

Bug#1094479: dolfin: FTBFS with numpy 2.x

2025-01-28 Thread Andrey Rakhmatullin
Source: dolfin Version: 2019.2.0~legacy20240219.1c52e83-16 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=dolfin&arch=amd64&ver=2019.2.0%7Elegacy20240219.1c52e83-16%2Bb1&stamp=1738048260&raw=0 File "/usr/lib/python3/dist-packages/ffc/uflacs/language/cnodes.py", l

Bug#1094478: FTBFS on mips64el: tests fail

2025-01-28 Thread Andrey Rakhmatullin
Source: scipy Version: 1.14.1-3 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=scipy&arch=mips64el&ver=1.14.1-3%2Bb1&stamp=1737992404&raw=0 Lots of different test failures, not sure if it's specific to numpy2 or a general problem. If it's because of numpy2 it makes s

Bug#1094385: matplotlib, pandas: build-depend cycle, unable to bootstrap

2025-01-28 Thread Andrey Rakhmatullin
On Tue, Jan 28, 2025 at 08:13:09AM +, Rebecca N. Palmer wrote: > Uploaded something, but without time to check if it builds. If it doesn't, > you have my permission to try fixing it, or I'll try again tonight. It failed the arch:all build ("dh_installdocs: error: Cannot find (any matches for)

Bug#1094385: matplotlib, pandas: build-depend cycle, unable to bootstrap

2025-01-27 Thread Andrey Rakhmatullin
On Mon, Jan 27, 2025 at 06:20:27PM +0100, Emilio Pozuelo Monfort wrote: > pandas build-depends on: > - python3-matplotlib:amd64 (>= 3.6.3~) > python3-matplotlib depends on missing: > - python3-numpy-abi9:amd64 > > matplotlib build-depends on: > - python3-pandas:amd64 > python3-pandas depends on: >

Bug#1093777: Autopkgtests fail on riscv64: hypothesis.errors.FailedHealthCheck: Data generation is extremely slow

2025-01-22 Thread Andrey Rakhmatullin
Source: python-returns Version: 0.24.0-1 Severity: serious https://ci.debian.net/packages/p/python-returns/testing/riscv64/56800351/ Lots of "hypothesis.errors.FailedHealthCheck: Data generation is extremely slow: Only produced 8 valid examples in 1.02 seconds (0 invalid ones and 0 exceeded maxim

Bug#1093612: Acknowledgement (FTBFS and autopkgtests fail on armhf and riscv64: assert not _q._sync_mutex.locked())

2025-01-20 Thread Andrey Rakhmatullin
Control: user -1 debian-pyt...@lists.debian.org Control: usertags -1 python3.13-default I don't know if it's related to Python 3.13 or not, but on a second thought I'll usertag it as if it is. It would be more clear if the package ran tests for all supported versions. Also note that riscv64 has m

Bug#1093612: FTBFS and autopkgtests fail on armhf and riscv64: assert not _q._sync_mutex.locked()

2025-01-20 Thread Andrey Rakhmatullin
Source: python-janus Version: 1.0.0-2 Severity: serious Tags: ftbfs https://ci.debian.net/packages/p/python-janus/testing/armhf/56725940/ https://ci.debian.net/packages/p/python-janus/testing/riscv64/56719506/ I also tried to rebuild the package in a local armhf chroot and it failed the same two

Bug#1093535: Doesn't work: ModuleNotFoundError: No module named 'future'

2025-01-19 Thread Andrey Rakhmatullin
Package: python3-whiteboard Version: 1.0+git20211001-2 Severity: grave Tags: upstream fixed-upstream Control: forwarded -1 https://github.com/pnegre/python-whiteboard/pull/27 The package doesn't work and I assume this means nobody uses it: $ python-whiteboard Using directory: /usr/share/python-

Bug#1093171: py-libzfs: switch away from cython-legacy

2025-01-15 Thread Andrey Rakhmatullin
Source: py-libzfs Version: 0.0+git20240510.5ae7d5e-1 Severity: serious Control: block 1067200 by -1 Your package build-depends or depends on cython-legacy, which was requested to be removed. Please switch away from cython-legacy ASAP. Note that cython-legacy is blocked from re-entering testing, s

Bug#1093017: Autopkgtests fail: ModuleNotFoundError: No module named 'cymem.cymem'

2025-01-14 Thread Andrey Rakhmatullin
Source: python-cymem Version: 2.0.10-1 Severity: serious https://ci.debian.net/packages/p/python-cymem/testing/amd64/56425584/ _ ERROR collecting cymem/tests/test_import.py __ ImportError while importing test module '/tmp/autopkgtest- lxc.jun1e344/downtmp/build.QsW

Bug#1092982: FTBFS: sphinx-build segfaults

2025-01-13 Thread Andrey Rakhmatullin
Source: pymatgen Version: 2024.10.29+dfsg1-4 Severity: serious Tags: ftbfs When building in a local sbuild chroot: reading sources... [ 10%] pymatgen.analysis Matplotlib created a temporary cache directory at /tmp/matplotlib-1a_c8sx6 because the default path (/sbuild-nonexistent/.config/matplotli

Bug#1092981: Autopkgtests fail with Python 3.13: KeyError: 'l'

2025-01-13 Thread Andrey Rakhmatullin
Source: pymatgen Version: 2024.10.29+dfsg1-4 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/p/pymatgen/testing/amd64/56411098/ -- System Information: Debian Release: trixie/sid APT prefers unstable-debug APT policy: (500, 'unstable-

Bug#1092915: Not installable on t64 arches: Depends: libagg2 (>= 2.6.0) but it is not installable

2025-01-13 Thread Andrey Rakhmatullin
On Mon, Jan 13, 2025 at 03:51:58PM +0100, Sven Eckelmann wrote: > Control: reassign -1 agg 1:2.7.0.r145+dfsg-1 > Control: retitle -1 Linked packages depends on libagg2 (>= 2.6.0) but it is > not installable > Control: affects -1 exactimage > > On Monday, 13 January 202

Bug#1092915: Not installable on t64 arches: Depends: libagg2 (>= 2.6.0) but it is not installable

2025-01-13 Thread Andrey Rakhmatullin
Package: exactimage Version: 1.0.2-12+b3 Severity: serious Both exactimage and python3-exactimage depend on libagg2 while the library is called libagg2t64. I don't see any hardcoded deps so it could be caused by something in libagg-dev (wrong shlibs file?). -- System Information: Debian Release

Bug#1092908: Autopkgtests fail: No such file or directory: '/home/debci/.config/invesalius/config.json'

2025-01-13 Thread Andrey Rakhmatullin
Source: invesalius Version: 3.1.8-6 Severity: serious https://ci.debian.net/packages/i/invesalius/testing/amd64/56355371/ I tried this locally, and after these two "Errno 2" lines instead of showing help and segfaulting it produced the following traceback(s): Traceback (most recent call last

Bug#1092872: FTBFS on riscv64: No such file or directory: 'systemctl'

2025-01-12 Thread Andrey Rakhmatullin
Source: sssd Version: 2.10.1-1 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=sssd&arch=s390x&ver=2.10.1-1&stamp=1736338545&raw=0 -- System Information: Debian Release: trixie/sid APT prefers unstable-debug APT policy: (500, 'unstable-debug'), (500, 'testing-deb

Bug#1092871: FTBFS on riscv64: AssertionError: Lists differ: [['en_US.lm', 1]] != [['user.lm', 1]]

2025-01-12 Thread Andrey Rakhmatullin
Source: onboard Version: 1.4.1-9 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=onboard&arch=riscv64&ver=1.4.1-9%2Bb1&stamp=1736401679&raw=0 -- System Information: Debian Release: trixie/sid APT prefers unstable-debug APT policy: (500, 'unstable-debug'), (500, '

Bug#1092081: virtualbox ftbfs with Python 3.13 as the default

2025-01-12 Thread Andrey Rakhmatullin
On Sat, Jan 04, 2025 at 12:25:59PM +0100, Matthias Klose wrote: > Checking for Python support: > ** Python not found! The expected Python versions are hardcoded, at least in "configure" ("SUPPYTHONLIBS") and don't include 3.13. -- WBR, wRAR signature.asc Description: PGP signature

Bug#1092802: Autopkgtests fail with Python 3.13: AttributeError: 'NoneType' object has no attribute 'span'

2025-01-11 Thread Andrey Rakhmatullin
Package: python3-skorch Version: 1.0.0-1 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/s/skorch/testing/amd64/56321425/ autopkgtest [09:12:00]: test command1: python3 debian/tests/example1.py autopkgtest [09:12:00]: test command1: [

Bug#1092797: Autopkgtests fail with Python 3.13

2025-01-11 Thread Andrey Rakhmatullin
Package: xonsh Version: 0.18.4+dfsg-1 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/x/xonsh/testing/amd64/56320881/ Not sure what is the actual failure unless it fails on warnings. -- System Information: Debian Release: trixie/sid A

Bug#1092796: Autopkgtests fail with Python 3.13: OSError: [Errno 9] Bad file descriptor

2025-01-11 Thread Andrey Rakhmatullin
Package: wireless-regdb Version: 2024.10.07-1 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/w/wireless-regdb/testing/amd64/56320878/ autopkgtest [09:10:13]: test check-signatures: [--- Exception ignored in: <_io.Buff

Bug#1092793: Autopkgtests fail with Python 3.13: Task was destroyed but it is pending!

2025-01-11 Thread Andrey Rakhmatullin
Package: python3-pytray Version: 0.3.5-4 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/p/python-pytray/testing/amd64/56320866/ Task was destroyed but it is pending! source_traceback: Object created at (most recent call last): File "/u

Bug#1092791: FTBFS: TypeError: GPR.__init__() takes from 1 to 2 positional arguments but 3 were given

2025-01-11 Thread Andrey Rakhmatullin
Source: python-cobra Version: 0.29.1-1 Severity: serious Tags: ftbfs May or may not be related to default Python being changed to 3.13. Lots of tests fail, the failures can be seen in the autopkgtest log at https://ci.debian.net/packages/p/python-cobra/testing/amd64/56317676/ but the build-time te

Bug#1092790: Autopkgtests fail with Python 3.13: ValueError: bad escapechar or quotechar value

2025-01-11 Thread Andrey Rakhmatullin
Package: pyspread Version: 2.2.3-1 Severity: serious User: debian-pyt...@lists.debian.org Usertags: python3.13 https://ci.debian.net/packages/p/pyspread/testing/amd64/56320860/ > csvreader = csv.reader(csvfile, dialect=dialect) E ValueError: bad escapechar or quotechar value -- Syst

Bug#1092754: Autopkgtests fail with Python 3.13: AttributeError: module 'unittest' has no attribute 'makeSuite'

2025-01-11 Thread Andrey Rakhmatullin
Source: pyspf Version: 2.0.14-4 Severity: serious https://ci.debian.net/packages/p/pyspf/testing/amd64/56284591/ Traceback (most recent call last): File "/tmp/autopkgtest-lxc.19efqpiv/downtmp/build.e9d/src/test/testspf.py", line 274, in tc = suite()# all tests, including doctests Fil

Bug#1092753: Autopkgtests fail with Python 3.13: AttributeError: module 'unittest' has no attribute 'makeSuite'

2025-01-11 Thread Andrey Rakhmatullin
Source: pymilter Version: 1.0.6-1 Severity: serious https://ci.debian.net/packages/p/pymilter/testing/amd64/56284590/ Traceback (most recent call last): File "/tmp/autopkgtest-lxc.2_pc5alp/downtmp/build.zwc/src/test.py", line 23, in unittest.TextTestRunner().run(suite())

Bug#1092752: Autopkgtests fail: AssertionError: {'a': 1} != {}

2025-01-11 Thread Andrey Rakhmatullin
Package: python3-pygrace Version: 0.6-4 Severity: serious https://ci.debian.net/packages/p/pygrace/testing/amd64/56284588/ -- System Information: Debian Release: trixie/sid APT prefers unstable-debug APT policy: (500, 'unstable-debug'), (500, 'testing-debug'), (500, 'unstable'), (500, 'test

Bug#1092751: Autopkgtests fail with Python 3.13: ModuleNotFoundError: No module named 'crypt'

2025-01-11 Thread Andrey Rakhmatullin
Source: postfix Version: 3.9.1-9 Severity: serious https://ci.debian.net/packages/p/postfix/testing/amd64/56317675/ Traceback (most recent call last): File "/tmp/autopkgtest-lxc.j_99q3ge/downtmp/build.IAz/src/debian/tests/test- postfix.py", line 42, in import testlib File "/tmp/autopkgte

Bug#1092750: Autopkgtests fail with Python 3.13: certificate verify failed: Basic Constraints of CA cert not marked critical

2025-01-11 Thread Andrey Rakhmatullin
Source: mosquitto Version: 2.0.20-1 Severity: serious https://ci.debian.net/packages/m/mosquitto/testing/amd64/56317666/ ssl.SSLCertVerificationError: [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: Basic Constraints of CA cert not marked critical (_ssl.c:1019) -- System Information

Bug#1092749: Autopkgtests fail with Python 3.13: ipdSummary output changed

2025-01-11 Thread Andrey Rakhmatullin
Source: kineticstools Version: 0.6.1+git20220223.1326a4d+dfsg-3 Severity: serious https://ci.debian.net/packages/k/kineticstools/testing/amd64/56313367/ $ ipdSummary usage: ipdSummary [-h] [--version] [--log-file LOG_FILE] -[--log-level {DEBUG,INFO,WARNING,ERROR,CRITICAL

Bug#1092748: Autopkgtests fail with Python 3.13: DeprecationWarning: 'maxsplit' is passed as positional argument

2025-01-11 Thread Andrey Rakhmatullin
Source: dnarrange Version: 1.5.3-1 Severity: serious https://ci.debian.net/packages/d/dnarrange/testing/amd64/56310221/ I assume "/usr/bin/dnarrange:561: DeprecationWarning: 'maxsplit' is passed as positional argument" is what causes the failure. -- System Information: Debian Release: trixie/si

Bug#1092746: Autopkgtests fail with Python 3.13

2025-01-11 Thread Andrey Rakhmatullin
Package: bpython Version: 0.24-1 Severity: serious https://ci.debian.net/packages/b/bpython/testing/amd64/56309710/ FAILED bpython/test/test_interpreter.py::TestInterpreter::test_syntaxerror - ... FAILED bpython/test/test_interpreter.py::TestInterpreter::test_traceback - As... FAILED bpython/test

Bug#1092744: Not buildable on arches without valgrind

2025-01-11 Thread Andrey Rakhmatullin
Source: sssd Version: 2.10.1-1 Severity: serious Tags: ftbfs armel and riscv64 don't have valgrind and so sssd can no longer be built there. -- System Information: Debian Release: trixie/sid APT prefers unstable-debug APT policy: (500, 'unstable-debug'), (500, 'testing-debug'), (500, 'unsta

Bug#1092743: FTBFS on 32-bit time64 arches: error: passing argument 1 of ‘gmtime_r’ from incompatible pointer type

2025-01-11 Thread Andrey Rakhmatullin
Source: obitools Version: 3.0.1~b26+dfsg-4 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=obitools&arch=armel&ver=3.0.1%7Eb26%2Bdfsg-4&stamp=1736521923&raw=0 arm-linux-gnueabi-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -O3 -w -I src -I src/libecoPC

Bug#1092741: FTBFS on arm64: dpkg-shlibdeps: error: cannot find library libXfixes.so.3

2025-01-11 Thread Andrey Rakhmatullin
Source: nvidia-cuda-toolkit Version: 12.2.1-2 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=nvidia-cuda- toolkit&arch=arm64&ver=12.2.1-2%2Bb1&stamp=1736455273&raw=0 dpkg-shlibdeps: error: cannot find library libXfixes.so.3 needed by debian/nsight-compute/usr/lib/nsi

Bug#1092458: FTBFS with Python 3.13: FAIL: breezy.tests.test_symbol_versioning.TestDeprecationWarnings.test_deprecated_method

2025-01-07 Thread Andrey Rakhmatullin
Source: breezy Version: 3.3.9-1 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=breezy&arch=amd64&ver=3.3.9-1%2Bb2&stamp=1736258298&raw=0 Traceback (most recent call last): File "/build/reproducible- path/breezy-3.3.9/breezy/tests/test_symbol_versioning.py", line 10

Bug#1092441: FTBFS with Python 3.13: error: ‘PyEval_CallObject’ was not declared in this scope

2025-01-07 Thread Andrey Rakhmatullin
Source: zeroc-ice Version: 3.7.10-3 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=zeroc- ice&arch=amd64&ver=3.7.10-3%2Bb1&stamp=1736266983&raw=0 modules/IcePy/Types.cpp: In static member function ‘static void IcePy::StreamUtil::setSlicedDataMember(PyObject*, const I

Bug#1092440: FTBFS with Python 3.13: error: implicit declaration of function '_PyImport_FixupExtensionObject'

2025-01-07 Thread Andrey Rakhmatullin
Source: libapache2-mod-python Version: 3.5.0.1-3 Severity: serious Tags: ftbfs https://buildd.debian.org/status/fetch.php?pkg=libapache2-mod- python&arch=amd64&ver=3.5.0.1-3%2Bb2&stamp=1736260721&raw=0 /usr/share/apr-1.0/build/libtool --mode=compile --tag=disable-static x86_64-linux-gnu-gcc -pre

Bug#1092058: ghmm ftbfs with Python 3.13 as the default

2025-01-04 Thread Andrey Rakhmatullin
On Sat, Jan 04, 2025 at 09:21:53AM +0100, Matthias Klose wrote: > ghmmwrapper_wrap.c: In function ‘PythonCallBack’: > ghmmwrapper_wrap.c:3573:9: error: implicit declaration of function > ‘PyEval_CallObject’; did you mean ‘PyObject_CallObject’? Dead upstream. The reason for the failure is https://g

Bug#1092057: kawari8 ftbfs with Python 3.13 as the default

2025-01-04 Thread Andrey Rakhmatullin
On Sat, Jan 04, 2025 at 09:20:17AM +0100, Matthias Klose wrote: > saori/saori_python.cpp: In function ‘int py_saori_exist(const char*)’: > saori/saori_python.cpp:145:28: error: ‘PyEval_CallObject’ was not declared > in this scope; did you mean ‘PyObject_CallObject’? Long dead upstream, wasn't inte

Bug#1092054: freesas ftbfs with Python 3.13 as the default

2025-01-04 Thread Andrey Rakhmatullin
On Sat, Jan 04, 2025 at 09:05:23AM +0100, Matthias Klose wrote: > + py3versions -sv > + P=.pybuild/cpython3_3.12_freesas/build > + cp -r src/freesas/test .pybuild/cpython3_3.12_freesas/build/freesas/ > cp: cannot create directory '.pybuild/cpython3_3.12_freesas/build/freesas/': > No such file or di

Bug#1090126: pyte: FTBFS: ERROR: Invalid value `None` in intersphinx_mapping['http://docs.python.org/']. Expected a two-element tuple or list.

2024-12-30 Thread Andrey Rakhmatullin
On Mon, Dec 30, 2024 at 09:10:27AM +0100, Florian Ernst wrote: > @debian-python: > > However, AFAIK intersphinx will download things from the internet during > build, which is not allowed by policy. So maybe just ripping out all > intersphinx references from the conf.py would be more suitable. I t

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