Hi,
other uploaders of pysam in CC: When building htseq with current pysam
in unstable I get:
...
All 26 tests passed.
Doctest of tss.rst:
**
File "../doc/tss.rst", line 211, in tss.rst
Failed example:
for almnt in sortedbam
On Sa, 2015-12-05 at 16:28 +0100, Soeren D. Schulze wrote:
> Am 12.11.2015 um 15:02 schrieb Sebastian Dröge:
> > On Do, 2015-11-12 at 14:41 +0100, Soeren D. Schulze wrote:
> > > Hello,
> > >
> > > the problem does not seem to occur any more with
> > > gstreamer1.0-plugins-bad 1.6.1-1+b1 and icewea
Hi Emmanuel and Nicolas,
I hope you realised the bug reported in Debian saying:
> your package depends on vtk 5.x, which should not be in stretch. Please
> switch to vtk 6.x or drop the dependency.
It would be great if you could adapt camitk and release a new version.
Kind regards
Andrea
Your message dated Sun, 06 Dec 2015 05:56:22 +
with message-id
and subject line Bug#807114: fixed in python-acme 0.1.0-2
has caused the Debian Bug report #807114,
regarding python-acme: needs python-openssl >= 0.15, but dependency is
unversioned
to be marked as done.
This means that you clai
Processing commands for cont...@bugs.debian.org:
> severity 805746 serious
Bug #805746 [src:aghermann] aghermann: Fails to build with GSL 2
Severity set to 'serious' from 'important'
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
805746: http://bugs.debian.org/cg
Raphael Hertzog writes:
> This one is actually documented, add_to_builtins has never been a public
> API.
>
> https://docs.djangoproject.com/en/1.9/releases/1.9/#django-template-base-add-to-builtins-is-removed
I thought this was removed in Django 1.8 - I remember as it caused me
significant prob
Valentin Lorentz writes:
> python-django-voting 0.2-1 (the current version in Sid) is not
> compatible with python-django 1.9-1 (the current version in Sid), but
> the dependency specification does not mention this incompatibility: it
> only requires: “python-django (>= 1.0)”.
This is somewhat a
Your message dated Sun, 06 Dec 2015 01:23:47 +
with message-id
and subject line Bug#795141: fixed in zeitgeist-explorer 0.2-1.1
has caused the Debian Bug report #795141,
regarding zeitgeist-explorer: FTBFS: invalid dates in changelog
to be marked as done.
This means that you claim that the pr
Your message dated Sun, 06 Dec 2015 01:22:55 +
with message-id
and subject line Bug#806769: fixed in normaliz 3.0.0+ds-3
has caused the Debian Bug report #806769,
regarding FTBS: failed test on mipsel architecture: random Bus error emitted
from GOMP
to be marked as done.
This means that you
Your message dated Sun, 06 Dec 2015 01:19:15 +
with message-id
and subject line Bug#802671: fixed in bouncycastle 1.51-2
has caused the Debian Bug report #802671,
regarding CVE-2015-7940: bouncycastle: ECC private keys can be recovered via
invalid curve attack
to be marked as done.
This mean
On Sat, Dec 05, 2015 at 08:37:15PM +0100, Matthias Klose wrote:
> no binNMU please.
Why? Are you planning to do a sourceful upload? If not, that would
resolve the installability issues that people are going to encounter.
Cheers,
--
James
GPG Key: 4096R/331BA3DB 2011-12-05 James McCoy
Processing commands for cont...@bugs.debian.org:
> affects 807128 gcc-5-base libgcc1
Bug #807128 [release.debian.org] nmu: gcc-5_5.3.0-3
Added indication that 807128 affects gcc-5-base and libgcc1
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
807128: http://bugs
Your message dated Sat, 05 Dec 2015 23:43:51 +
with message-id
and subject line Bug#804586: fixed in qtiplot 0.9.8.9-11
has caused the Debian Bug report #804586,
regarding qtiplot: FTBFS: Error: pdflatex compilation failed
to be marked as done.
This means that you claim that the problem has b
Your message dated Sat, 05 Dec 2015 22:52:22 +
with message-id
and subject line Bug#805565: fixed in network-manager 1.0.8-2
has caused the Debian Bug report #805565,
regarding network-manager: ppp new upstream release; dh_ppp
to be marked as done.
This means that you claim that the problem h
Your message dated Sat, 05 Dec 2015 22:52:27 +
with message-id
and subject line Bug#805566: fixed in network-manager-pptp 1.0.8-2
has caused the Debian Bug report #805566,
regarding network-manager-pptp: ppp new upstream release; dh_ppp
to be marked as done.
This means that you claim that the
On 05/12/2015 20:37, Matthias Klose wrote:
> no binNMU please.
>
> On 05.12.2015 19:25, James McCoy wrote:
>> Control: reassign -1 release.debian.org
>> Control: retitle -1 nmu: gcc-5_5.3.0-3
>> Control: user release.debian@packages.debian.org
>> Control: usertag -1 binnmu
>>
>> nmu gcc-5_5.3
Processing control commands:
> tags -1 pending
Bug #805202 [src:gramps] gramps: FTBFS: test_regular_date_parsed_dmy: Failure:
ImproperlyConfigured
Added tag(s) pending.
--
805202: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=805202
Debian Bug Tracking System
Contact ow...@bugs.debian.org wi
Control: tags -1 pending
Hi,
I was expecting this issue as I had a preview of a similar failure in
Ubuntu when Python 3.5 is the default.
I had been waiting for Django 1.8, and now we have Django 1.9 and the
failure still exists.
As the Django webapp in Gramps is not yet enabled (not used), the
On Sat, 05 Dec 2015, Neil Williams wrote:
> http://paste.debian.net/341382/
So this one is fairly obvious, I already replied that it's
django.template.base.Origin that you should have used in the first place
since where the code actually is... relying on the fact that it was
also imported in djang
On Sat, 2015-12-05 at 18:21 +0100, Andreas Tille wrote:
> Hi,
>
> I'm just forwarding this mail from upstream. From my perspective it is
> possibly not a bug in libminc but rather a problem of certain mips
> hardware.
I haven't looked at this build failure in particular, but I do know the
FPUs
no binNMU please.
On 05.12.2015 19:25, James McCoy wrote:
Control: reassign -1 release.debian.org
Control: retitle -1 nmu: gcc-5_5.3.0-3
Control: user release.debian@packages.debian.org
Control: usertag -1 binnmu
nmu gcc-5_5.3.0-3 . amd64 . unstable . -m "Rebuild to fix M-A installability"
Am 05.12.2015 um 18:12 schrieb Andreas Tille:
> Hi,
>
> I just noticed that the reverse depends of this package are removed from
> testing. As you know I tried to help in resolving this bug but I was
> running out of ideas and contacting upstream was also not helpful.
>
> Any news about this?
>
Steve et al,
I used an emulated mipsel environment using some other distributions (found
here: https://people.debian.org/~aurel32/qemu/mipsel/) - the bug was not
reproducible. I am in the process of building a QEMU environment for a more
recent release ("sid" from 20151023), I will try that as soo
Control: reassign -1 release.debian.org
Control: retitle -1 nmu: gcc-5_5.3.0-3
Control: user release.debian@packages.debian.org
Control: usertag -1 binnmu
nmu gcc-5_5.3.0-3 . amd64 . unstable . -m "Rebuild to fix M-A installability"
On Sat, Dec 05, 2015 at 01:00:20PM -0500, James McCoy wrote:
Processing control commands:
> reassign -1 release.debian.org
Bug #807128 [gcc-5-base] gcc-5-base: Differing changelog.Debian.gz between
:i386 and :amd64
Bug reassigned from package 'gcc-5-base' to 'release.debian.org'.
No longer marked as found in versions gcc-5/5.3.0-3.
Ignoring request to alte
Hi,
[Adding minc-development as follow-up to previous email;
http://www.bic.mni.mcgill.ca/pipermail/minc-development/2015-November/001223.html
]
On December 4, 2015 08:25:09 PM Jurica Stanojkovic wrote:
> User: debian-m...@lists.debian.org
>
> Hello,
>
> I have tried to build package libmin
Processing commands for cont...@bugs.debian.org:
> found 806930 2012.05.06-2
Bug #806930 [pianobar] pianobar needs update for new server SSL certificate
Marked as found in versions pianobar/2012.05.06-2.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
806930: http
Processing commands for cont...@bugs.debian.org:
> found 806930 2014.06.08-1
Bug #806930 [pianobar] pianobar needs update for new server SSL certificate
Marked as found in versions pianobar/2014.06.08-1.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
806930: http
Processing commands for cont...@bugs.debian.org:
> fixed 806930 2015.11.22-1
Bug #806930 [pianobar] pianobar needs update for new server SSL certificate
Marked as fixed in versions pianobar/2015.11.22-1.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
806930: http
Niko Tyni writes:
> Turns out the backported SOURCE_DATE_EPOCH support from podlators-4.00
> doesn't itself survive being build with SOURCE_DATE_EPOCH (or
> POD_MAN_DATE, for that matter) set. Patch attached.
Doh. Thanks. :) I'll kick out a new version, probably this weekend.
--
Russ Allber
Package: gcc-5-base
Version: 5.3.0-3
Severity: serious
Unpacking gcc-5-base:amd64 (5.3.0-3) over (5.2.1-27) ...
Preparing to unpack .../gcc-5-base_5.3.0-3_i386.deb ...
Unpacking gcc-5-base:i386 (5.3.0-3) over (5.2.1-27) ...
dpkg: error processing archive
/var/cache/apt/archives/gcc-5-base_5.3.0-3
Your message dated Sat, 5 Dec 2015 09:52:56 -0800
with message-id
and subject line Fwd:
golang-golang-x-net-dev_0.0+git20150817.66f0418-1_source.changes ACCEPTED into
unstable
has caused the Debian Bug report #807113,
regarding golang-golang-x-net-dev and golang-golang-x-crypto-dev: error when
On 5 December 2015 at 05:45, Ralf Treinen wrote:
> automatic installation tests of packages that share a file and at the
> same time do not conflict by their package dependency relationships has
> detected the following problem:
This whole mess was my fault. :( (See #807002 for more details.)
I
Hi,
I'm just forwarding this mail from upstream. From my perspective it is
possibly not a bug in libminc but rather a problem of certain mips
hardware. I wonder in how far this is a serious bug of libminc and
should be downgraded to important (at maximum).
Kind regards
Andreas.
On Sat,
Hi,
can we get a fixed version into at least experimental please? The bug is
already open since agx. I'm also happy to NMU.
Cheers,
-- Guido
Hi,
I just noticed that the reverse depends of this package are removed from
testing. As you know I tried to help in resolving this bug but I was
running out of ideas and contacting upstream was also not helpful.
Any news about this?
Kind regards
Andreas.
--
http://fam-tille.de
Hi Jurica,
On Fri, Dec 04, 2015 at 08:25:09PM +, Jurica Stanojkovic wrote:
> I have tried to build package libminc_2.3.00-2 for mipsel and mips64el on
> diferent build boards: netlogic-xlp, cavium and loongson-3a.
> This package FTBFS only on loongson-3a (lemote).
> On other build machines p
Am 12.11.2015 um 15:02 schrieb Sebastian Dröge:
On Do, 2015-11-12 at 14:41 +0100, Soeren D. Schulze wrote:
Hello,
the problem does not seem to occur any more with
gstreamer1.0-plugins-bad 1.6.1-1+b1 and iceweasel 38.4.0esr-1.
Do you have any specific packages for me to test?
Just a normal je
Your message dated Sat, 05 Dec 2015 14:01:48 +
with message-id
and subject line Bug#797738: fixed in gdcm 2.6.0+dfsg-1
has caused the Debian Bug report #797738,
regarding gdcm: ABI transition needed for libstdc++ v5
to be marked as done.
This means that you claim that the problem has been dea
Your message dated Sat, 05 Dec 2015 14:01:48 +
with message-id
and subject line Bug#801228: fixed in gdcm 2.6.0+dfsg-1
has caused the Debian Bug report #801228,
regarding libopenjp2-7-dev should conflict with src:gdcm
to be marked as done.
This means that you claim that the problem has been d
Your message dated Sat, 05 Dec 2015 14:01:48 +
with message-id
and subject line Bug#797673: fixed in gdcm 2.6.0+dfsg-1
has caused the Debian Bug report #797673,
regarding Switch back to SWIB based C# layer in GDCM
to be marked as done.
This means that you claim that the problem has been dealt
Source: python-acme
Version: 0.1.0-1
Severity: serious
python-acme needs at least version 0.15 of python-openssl. This is
reflected in the Build-Depends, but the binary packages have an
unversioned dependency on python-openssl.
Trying to use the letsencrypt client with older versions of
python-o
control: severity -1 important
control: tag -1 unreproducible moreinfo
On sam., 2015-12-05 at 11:04 +0100, Thomas Weber wrote:
> Package: xfce4-terminal
> Version: 0.6.3-2
> Severity: grave
> Justification: renders package unusable
>
> Launching xfce4-terminal as normal user gives the following e
Processing control commands:
> severity -1 important
Bug #807091 [xfce4-terminal] xfce4-terminal fails to start with an error message
Severity set to 'important' from 'grave'
> tag -1 unreproducible moreinfo
Bug #807091 [xfce4-terminal] xfce4-terminal fails to start with an error message
Added tag
Package: golang-golang-x-crypto-dev,golang-golang-x-net-dev
Version: golang-golang-x-crypto-dev/1:0.0~git20151201.0.7b85b09-2
Version: golang-golang-x-net-dev'0.0+git20151007.b846920+dfsg-1@all,
golang-golang-x-net-dev/1:0.0~git20151201.0.7b85b09-1
Severity: serious
User: trei...@debian.org
Userta
Your message dated Sat, 05 Dec 2015 12:57:48 +
with message-id
and subject line Bug#706928: fixed in zemberek-server 0.7.1-12.2
has caused the Debian Bug report #706928,
regarding zemberek-server doesn't respect to the Java paths of the system
to be marked as done.
This means that you claim t
Your message dated Sat, 05 Dec 2015 12:57:48 +
with message-id
and subject line Bug#761646: fixed in zemberek-server 0.7.1-12.2
has caused the Debian Bug report #761646,
regarding zemberek-server: missing dependency on dbus
to be marked as done.
This means that you claim that the problem has
Processing commands for cont...@bugs.debian.org:
> reassign 807015 xserver-xorg-core 2:1.17.2-2
Bug #807015 [xinit] xinit: startx freezes, mouse and keyboard don't work
Bug reassigned from package 'xinit' to 'xserver-xorg-core'.
No longer marked as found in versions xinit/1.3.4-3.
Ignoring request
On Sat, 5 Dec 2015 07:55:54 +1100 Craig Sanders wrote:
> On Fri, Dec 04, 2015 at 01:57:53PM +0100, Laurent Bigonville wrote:
> > Are you using systemd?
>
> Nope, this particular machine is still sysvinit.
>
> It also has over 20 years worth of cruft on it, as i first built it in
> 1994 and have c
Your message dated Sat, 05 Dec 2015 11:22:03 +
with message-id
and subject line Bug#802461: fixed in kde-baseapps 4:15.08.3-1
has caused the Debian Bug report #802461,
regarding dolphin4: fails to upgrade from 'jessie' - trying to overwrite
/usr/lib/kde4/dolphinpart.so
to be marked as done.
Downgrading to testing fixes both the server import error and the unit
test import error. Neither of these issues were seen with the version
of 1.9 that was actually in experimental.
--
Neil Williams
=
http://www.linux.codehelp.co.uk/
pgpMEYlQysxlW.pgp
Description: OpenPGP digita
Package: python-django
Version: 1.9-1
Severity: grave
Justification: renders package unusable
http://paste.debian.net/341382/
http://paste.debian.net/341383/
I had previously tested django1.9 from experimental and have prepared changes
which allow
lava-server to run and for all the unit tests t
Your message dated Sat, 05 Dec 2015 10:23:10 +
with message-id
and subject line Bug#807038: fixed in perl 5.22.1~rc3-2
has caused the Debian Bug report #807038,
regarding perl/experimental: FTBFS on powerpc: t/op/sprintf2.t failure
to be marked as done.
This means that you claim that the prob
Your message dated Sat, 05 Dec 2015 10:23:10 +
with message-id
and subject line Bug#807086: fixed in perl 5.22.1~rc3-2
has caused the Debian Bug report #807086,
regarding perl/experimental: FTBFS: cpan/podlators/t/devise-date failure
to be marked as done.
This means that you claim that the pr
Package: xfce4-terminal
Version: 0.6.3-2
Severity: grave
Justification: renders package unusable
Launching xfce4-terminal as normal user gives the following error message in an
error window:
"Failed to execute child
grantpt failed: Operation not permitted"
After closing the error message, the ter
On 2015-12-04 23:38, Michael Biebl wrote:
> Hi
>
> Am 04.12.2015 um 10:06 schrieb Chris Boot:
>> Control: severity serious
>>
>> Hi Michael,
>>
>> I have now uploaded ppp 2.4.7-1+1 to unstable, therefore the ppp plugin
>> this package ships is now broken in sid. Please upload a patched version
>>
Your message dated Sat, 05 Dec 2015 09:37:28 +
with message-id
and subject line Bug#807080: fixed in libraw1394 2.1.1-2
has caused the Debian Bug report #807080,
regarding libraw1394: Please drop obsolete MAKEDEV call
to be marked as done.
This means that you claim that the problem has been d
On Fri, Dec 04, 2015 at 02:08:01PM -0600, Craig A. Berry wrote:
> On Fri, Dec 4, 2015 at 12:24 PM, Niko Tyni wrote:
> > doublekind='4'; looks like those tests get run only on linux
> > with that doublekind.
>
> Right. I hadn't noticed the linux-only part before. These tests came
> in with a fi
Processing commands for cont...@bugs.debian.org:
> tags 807038 + patch fixed-upstream
Bug #807038 [perl] perl/experimental: FTBFS on powerpc: t/op/sprintf2.t failure
Added tag(s) fixed-upstream and patch.
> thanks
Stopping processing here.
Please contact me if you need assistance.
--
807038: htt
Package: perl
Version: 5.22.1~rc3-1
Severity: serious
Tags: upstream patch
X-Debbugs-Cc: Russ Allbery
This package failed to build on ppc64el and mips64el:
cpan/podlators/t/devise-date .. # Failed
test 'devise_date matches strftime'
# at t/devise-date.t l
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