Bug#995406: [Debian-med-packaging] Bug#995406: bbmap: package does not ship resource files

2021-10-04 Thread Étienne Mollier
Hi Robert, Thank you for enlightening me on bbmap usage! While accessing datasets over the Internet has a history of rendering tests flaky, and injecting lots of data in the debian/tests/ directory does not play well with the disk usage of the Debian archive, thanks to your explanations, I could

Bug#995406: [Debian-med-packaging] Bug#995406: bbmap: package does not ship resource files

2021-10-04 Thread Robert
Hi, With respect to the package test: the two fastq input files have to match, since the "reads" i.e. fastq records typically come in pairs, so one file has the forward reads and the other the respective reverse reads in the same order. I've tried sending this reply with a suitable set of files a

Bug#995406: [Debian-med-packaging] Bug#995406: bbmap: package does not ship resource files

2021-09-30 Thread Étienne Mollier
Control: found -1 38.90+dfsg-1 Control: tag -1 confirmed Hi all, Andreas Tille, on 2021-09-30: > Am Thu, Sep 30, 2021 at 01:22:23PM -0400 schrieb Robert: > > The bbmap package does not ship the needed resource files which causes some > > of > > the included tools not to work, e.g. bbduk when try

Bug#995406: bbmap: package does not ship resource files

2021-09-30 Thread Andreas Tille
Control: tags -1 pending Hi Robert, thanks a lot for the Am Thu, Sep 30, 2021 at 01:22:23PM -0400 schrieb Robert: > The bbmap package does not ship the needed resource files which causes some of > the included tools not to work, e.g. bbduk when trying to process some fastq > data, crashes with o

Bug#995406: bbmap: package does not ship resource files

2021-09-30 Thread Robert
Package: bbmap Version: 38.93+dfsg-1 Severity: normal Tags: patch X-Debbugs-Cc: hei...@umich.edu Dear Maintainer, The bbmap package does not ship the needed resource files which causes some of the included tools not to work, e.g. bbduk when trying to process some fastq data, crashes with output l