Bug#994714: ncbi-blast+: makeblastdb output dependent of endianness

2021-09-20 Thread Étienne Mollier
Hi Aaron, Aaron M. Ucko, on 2021-09-19: > As of BLAST+ 2.10.0, makeblastdb defaults to making version 5 databases, > via the third-party LMDB library that uses an architecture-dependent > on-disk layout (differing between little-endian and big-endian systems; > I'm not sure offhand about 32-bit vs

Bug#994714: ncbi-blast+: makeblastdb output dependent of endianness

2021-09-20 Thread Aaron M. Ucko
Étienne Mollier writes: > the pieces of the puzzle together. Thanks for your explanation, No problem; please feel free to ping me if there's anything else I can clarify. Also, sorry for the badly half-baked metadata update. > Have a nice day, :) Thanks, you too! -- Aaron M. Ucko, KB1CJC (

Bug#994714: ncbi-blast+: makeblastdb output dependent of endianness

2021-09-19 Thread Aaron M. Ucko
Control: reassign 994714 kleborate/2.1.0-1 Étienne Mollier writes: > At this point, I strongly suspect that, either makeblastdb does > not output properly blastdb files on big endian systems, or > kleborate is not able to decode properly an eventual blastdb > database with big endian specific la

Bug#994714: ncbi-blast+: makeblastdb output dependent of endianness

2021-09-19 Thread Étienne Mollier
Package: ncbi-blast+ Version: 2.11.0+ds-1 Severity: important Hi Aaron, I am currently investigating kleborate failure to migrate to testing. The failure is due to build time test suite failure on s390x [1]. [1]: https://buildd.debian.org/status/fetch.php?pkg=kleborate&arch=s390x&ver=2.1.0-1&s