Hi James,
On Mon, Dec 11, 2017 at 09:53:05AM +, James Bonfield wrote:
> I'm unsure why I didn't get notification of James Cowgill's email, but
> yes that was indeed the problem.
>
> The bug was real of course, thanks for spotting and reporting it, but
> the fix I made in September did indeed
I'm unsure why I didn't get notification of James Cowgill's email, but
yes that was indeed the problem.
The bug was real of course, thanks for spotting and reporting it, but
the fix I made in September did indeed have the #include at the start:
https://github.com/jkbonfield/io_lib/commit/b0fa4620
Hi,
On 07/12/17 15:28, Andreas Tille wrote:
> On Thu, Dec 07, 2017 at 02:40:36PM +, James Bonfield wrote:
>> On Tue, Dec 05, 2017 at 08:02:18AM +0100, Andreas Tille wrote:
>>> this is a kind ping since as I wrote below the issue seems not be solved.
>>
>> I'm not sure I can easily debug this a
Hi,
On Thu, Dec 07, 2017 at 02:40:36PM +, James Bonfield wrote:
> On Tue, Dec 05, 2017 at 08:02:18AM +0100, Andreas Tille wrote:
> > this is a kind ping since as I wrote below the issue seems not be solved.
>
> I'm not sure I can easily debug this as it only fails on systems I
> have no acces
On Tue, Dec 05, 2017 at 08:02:18AM +0100, Andreas Tille wrote:
> this is a kind ping since as I wrote below the issue seems not be solved.
I'm not sure I can easily debug this as it only fails on systems I
have no access to; it's like trying to debug your grandmother's
windows desktop over the pho
Hi again James,
this is a kind ping since as I wrote below the issue seems not be solved.
Kind regards
Andreas.
On Thu, Sep 28, 2017 at 04:24:19PM +0200, Andreas Tille wrote:
> Hi James,
>
> I uploaded staden-io-lib now with your patch which solved the other bug.
>
> On Thu, Sep 28, 2
Hi James,
I uploaded staden-io-lib now with your patch which solved the other bug.
On Thu, Sep 28, 2017 at 10:11:50AM +0100, James Bonfield wrote:
> > On Tue, Sep 26, 2017 at 10:38:12PM +0200, Christian Seiler wrote:
>
> Debugging the code for this test case shows it is doing fseeko with
> offse
> On Tue, Sep 26, 2017 at 10:38:12PM +0200, Christian Seiler wrote:
> > ERRORS
> >[...]
> >EINVAL The whence argument to fseek() was not SEEK_SET,
> >SEEK_END, or SEEK_CUR. Or: the resulting file offset would
> >be negative.
> >
> > I suspect that something is call
control: forwarded -1 James Bonfield
control: tags -1 upstream
Hi James,
there is another issue reported to the Debian packaged io_lib
which you can read here:
https://bugs.debian.org/876840
Below is a hint what might have caused the issue.
Kind regards
Andreas.
On Tue, Sep 26, 20
Hi Andreas,
On 09/26/2017 10:08 PM, Andreas Tille wrote:
> I need to admit I have no idea why
>
>fseeko() on reference file: Invalid argument
>
> is happening on some architectures.
According to the manpage of fseek(), which is identical to fseeko()
apart from the offset data type:
ERRORS
control: tags -1 help
Hi,
I need to admit I have no idea why
fseeko() on reference file: Invalid argument
is happening on some architectures.
Any help is welcome
Andreas.
On Tue, Sep 26, 2017 at 12:28:38PM +0300, Adrian Bunk wrote:
> Source: staden-io-lib
> Version: 1.14.9-2
> Sever
Source: staden-io-lib
Version: 1.14.9-2
Severity: serious
https://buildd.debian.org/status/package.php?p=staden-io-lib&suite=sid
...
FAIL: java
==
=== testing ./data/aux#aux_java.cram ===
root=aux#aux_java
../progs/scramble -r ./data/aux.fa ./data/aux#aux_java.cram
test.out/aux#aux_ja
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