Hi Daniel,
thanks for the quick response.
On Mon, Dec 19, 2016 at 11:42:33PM -0800, Daniel McDonald wrote:
> Try a different seed? Same issue: it's a stochastic test.
Hmmm, shouldn't the verification routine of the test result be able to
cope with the randomness instead to fail for a random set
Try a different seed? Same issue: it's a stochastic test. Other option is
bump the number of iterations it performs.
Best,
Daniel
On Dec 19, 2016 23:32, "Andreas Tille" wrote:
> Hi Daniel,
>
> thanks for the helpful hint. I've uploaded a package with the suggested
> fix and I hope this random
Hi Daniel,
thanks for the helpful hint. I've uploaded a package with the suggested
fix and I hope this random error will be solved now. However, there seems
to be another issue which happens on i386 architecture only:
I: pybuild base:184: cd
/«BUILDDIR»/python-biom-format-2.1.5+dfsg/.pybuild/
Thanks, Greg.
Andreas, the particular test that is failing as it is stochastic. It is
likely possible to just set a random seed at entry into the test here:
https://github.com/biocore/biom-format/blob/master/tests/test_util.py#L48
Specifically, doing something like "np.random.seed(123)"
Best,
D
Hi Andreas, I'm cc'ing Daniel McDonald on this message, who is the primary
maintainer of the biom-format package these days. Daniel, could you follow
up with Andreas?
On Sat, Dec 17, 2016 at 3:53 PM, Andreas Tille wrote:
> Hi Greg,
>
> the Debian packaged biom-format received a bug report which
Hi Greg,
the Debian packaged biom-format received a bug report which leaves me
clueless how to track it down. Is there possibly some way to make the
test suite more verbose to find out what part might cause the random
failure which you can see in the buil logs linked from the bug page
https:/
Package: src:python-biom-format
Version: 2.1.5+dfsg-5
Severity: serious
Dear maintainer:
I tried to build this package in stretch with "dpkg-buildpackage -A"
(which is what the "Arch: all" autobuilder would do to build it)
but it failed:
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