I also have the same problem. Log:
$ cat x.fq
@C17VNACXX121020:6:1101:1:52894/2
AGACCTCGCTACCCGCCAGCA
+
CCCFHHGHHJJJA
$ fastqc x.fq
Started analysis of x.fq
Analysis complete for x.fq
Failed to process file x.fq
java.lang.NullPointerException
at
uk.ac.babraham.FastQC.Rep
Hi Ognyan,
sorry for the late reply (I've though I would have answered immediately
but BTS does not show something ...)
Can you please specify what exactly you did after starting fastqc to
enable us reproducing the problem. I admit I'm not a user of this program
myself so I need some additional
Package: fastqc
Version: 0.10.1+dfsg-1
Severity: grave
Non-interactive fastqc always fails with
java.lang.NullPointerException
at
uk.ac.babraham.FastQC.Report.HTMLReportArchive.startDocument(HTMLReportArchive.java:170)
at
uk.ac.babraham.FastQC.Report.HTMLReportArchive.(HTMLReportA
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