Bug#807580: Bug#807580: More licensing issues (Was: BLAT license)

2016-03-14 Thread Michael Lawrence
d understand your hesitation. > > Kind regards > > Andreas. > > On Mon, Mar 14, 2016 at 01:16:42PM -0700, Michael Lawrence wrote: > > The license stuff was never changed in the release branch of > Bioconductor. > > That all happened in the devel branch. Next month, wit

Bug#807580: Bug#807580: More licensing issues (Was: BLAT license)

2016-03-14 Thread Michael Lawrence
The license stuff was never changed in the release branch of Bioconductor. That all happened in the devel branch. Next month, with the Bioc release, the devel branch becomes the release branch, so I'm not sure it's worth back porting right now. Michael On Mon, Mar 14, 2016 at 1:09 PM, Andreas Til

Bug#807580: [Debian-med-packaging] Bug#807580: More licensing issues (Was: BLAT license)

2015-12-19 Thread Michael Lawrence
Are you guys saying that an R package that depends on another R package is considered a derivative work? If so, there are probably an enormous number of CRAN/Bioc packages in violation. My choice of license for rtracklayer should not affect the On Sat, Dec 19, 2015 at 9:07 PM, Charles Plessy wrot

Bug#807580: [Debian-med-packaging] Bug#807580: More licensing issues (Was: BLAT license)

2015-12-19 Thread Michael Lawrence
Sorry accidentally hit send. Anyway, rtracklayer's license should not affect the license of any of its dependencies. At least, the R community has never taken that stance, as far as I know. On Sat, Dec 19, 2015 at 9:14 PM, Michael Lawrence wrote: > Are you guys saying that an R pack

Bug#807580: [devteam-bioc] [Debian-med-packaging] More licensing issues (Was: BLAT license)

2015-12-14 Thread Michael Lawrence
Would someone please clarify a series of steps that would lead to favorable (for the world) resolution? rtracklayer only uses the code in "src/lib" and "src/inc". Stuff for reading/writing BigWig and 2bit files. It sounds like Jim would need to choose a license that is more explicitly "free" than

Bug#650760: rgtk2: FTBFS on ia64: *** caught segfault *** address 0x1000050, cause 'memory not mapped'

2012-01-02 Thread Michael Lawrence
Hi Dirk, No, I don't have an Itanium around, unfortunately. Without that, it's tough to say. Probably something to do with the GType arithmetic. On a 64 bit system, I *think* a GType is a 64 bit integer, whereas in R we only have 52 bits from double. On most 64 bit architectures, it seems that the

Bug#475974: cairodevice: FTBFS: cairoDevice.c:1049: error: 'NewDevDesc' has no member named 'newDevStruct'

2008-04-14 Thread Michael Lawrence
OK you will need to use cairoDevice 2.6.1 with R 2.7 or above. install.packages() should find it properly. Thanks, Michael On Mon, Apr 14, 2008 at 7:26 PM, Dirk Eddelbuettel <[EMAIL PROTECTED]> wrote: > On Mon, Apr 14, 2008 at 07:24:17PM -0700, Michael Lawrence wrote: > > Which

Bug#451127: Please add desktop file and respective icon file

2007-11-13 Thread Michael Lawrence
On Nov 13, 2007 10:21 AM, Dirk Eddelbuettel <[EMAIL PROTECTED]> wrote: > > Hi Marco, (and Hi Hadley and Michael) > > Thanks for the bugreport -- much appreciated. > > On 13 November 2007 at 15:13, [EMAIL PROTECTED] wrote: > | Package: ggobi > | Severity: wishlist > | > | Please add Ubuntu patch to

Bug#412129: r-omegahat-ggobi: rggobi seems to be hanging on to a lot of X resources

2007-02-23 Thread Michael Lawrence
wrote: On Fri, 2007-02-23 at 16:59 -0600, Michael Lawrence wrote: > How reproducible is this bug? Did you try to rm() the ggobi references > from the R session? start R inside ESS g<-ggobi(data) 4.7M = total reported by interactive xrestop close(g) 4.6M rm(g) 4.6M g2<-ggobi(data) 9.3

Bug#412129: r-omegahat-ggobi: rggobi seems to be hanging on to a lot of X resources

2007-02-23 Thread Michael Lawrence
How reproducible is this bug? Did you try to rm() the ggobi references from the R session? On 2/23/07, Dirk Eddelbuettel <[EMAIL PROTECTED]> wrote: Mike, Hadley, Fresh bug report from Ross. I am not sure what value I can add here. If you can think of anything, let me know. Dirk On 23 Februa