Bug#1103162: nmu: coot_1.1.15+dfsg-1

2025-04-24 Thread Michael Banck
Hi, On Thu, Apr 24, 2025 at 01:05:33PM +0200, Paul Gevers wrote: > On Mon, 21 Apr 2025 12:50:15 +0200 Sebastian Ramacher > wrote: > > > Right. But coot is the only reverse-depdency, and I think it is ok to > > > rebuild it for trixie and then re-assess the situation post-trixie. E.g. > > > we cou

Bug#1057556: elpa: FTBFS: not enough slots available

2025-04-24 Thread Michael Banck
Hi Graham, On Thu, Apr 24, 2025 at 08:28:16AM +, Graham Inggs wrote: > On Sat, 12 Apr 2025 at 12:04, Graham Inggs wrote: > > I'd prefer MIchael to go ahead with 2024.05.001-2 to unstable, but I'm > > also happy to upload 2022.11.001-4 which I was working on previously. > > I'll assume you ar

Bug#1103162: nmu: coot_1.1.15+dfsg-1

2025-04-17 Thread Michael Banck
Hi, On Thu, Apr 17, 2025 at 08:41:35AM +0200, Sebastian Ramacher wrote: > On 2025-04-15 17:10:44 +0200, Michael Banck wrote: > > On Tue, Apr 15, 2025 at 08:40:59AM +0200, Sebastian Ramacher wrote: > > > Control: tags -1 moreinfo > > > > > > On 2025-04-14

Bug#1103162: nmu: coot_1.1.15+dfsg-1

2025-04-15 Thread Michael Banck
Hi, On Tue, Apr 15, 2025 at 08:40:59AM +0200, Sebastian Ramacher wrote: > Control: tags -1 moreinfo > > On 2025-04-14 19:49:00 +0200, Michael Banck wrote: > > Package: release.debian.org > > Severity: normal > > User: release.debian@packages.debian.org > &

Bug#1103162: nmu: coot_1.1.15+dfsg-1

2025-04-14 Thread Michael Banck
Package: release.debian.org Severity: normal User: release.debian@packages.debian.org Usertags: binnmu nmu coot_1.1.15+dfsg-1 . ANY . unstable . -m "Rebuild against librdkit-dev"

Bug#1102463: [Debichem-devel] Bug#1102463: cp2k: diff for NMU version 2025.1-1.1

2025-04-14 Thread Michael Banck
Hi Adrian, On Fri, Apr 11, 2025 at 11:42:02AM +0300, Adrian Bunk wrote: > I've uploaded an NMU for cp2k (versioned as 2025.1-1.1). > The diff is attached to this message. Thanks, I've pushed you debdiff to salsa. Michael

Bug#1062204: Newly-created clusters have restrictive postgresql.conf permissions

2025-03-11 Thread Michael Banck
On Tue, Mar 11, 2025 at 08:25:15PM +0100, Michael Banck wrote: > > But I'm not sure if it's an upstream bug, or a latent flaw in the Debian > > packaging. > > I had another look today and I think it is an upstream thing To clarify this a bit: Patroni renames the or

Bug#1062204: Newly-created clusters have restrictive postgresql.conf permissions

2025-03-11 Thread Michael Banck
Hi, On Wed, Jan 31, 2024 at 05:28:34PM +, Ben Harris wrote: > When Patroni creates a new PostgreSQL cluster, the postgresql.conf file in > /etc/patroni// ends up without world read permission. This > means that tools that use pg_wrapper (such as /usr/bin/psql) can't find the > cluster's port n

Bug#1093086: [Debichem-devel] Bug#1093086: rdkit: FTBFS on big-endian architectures

2025-03-03 Thread Michael Banck
Hi, On Mon, Mar 03, 2025 at 12:22:17PM +0200, Andrius Merkys wrote: > I think this is high time to proceed with architecture limiting. Are you > planning to update rdkit to 202409.5, or are you fine with me performing the > architecture limiting ASAP? I did that now, thanks for the reminder! Mi

Bug#1075399: Status of psicode

2025-02-16 Thread Michael Banck
Hi, On Fri, Feb 14, 2025 at 08:42:59AM +0100, Andreas Tille wrote: > this is another ping about a decision what to do with psicode. Please > simply state whether it is worth fixing #1075399 of the current version > in Debian and I might spent some time into it. I simply want to know > whether it

Bug#1094487: patroni: pg_clonecluster_patroni fails: Error: cluster configuration already exists

2025-02-10 Thread Michael Banck
Hi, On Mon, Feb 10, 2025 at 12:43:54PM +, Ben Harris wrote: > On Mon, 10 Feb 2025, Michael Banck wrote > > I tried to reproduce the reinit failure, but it always worked for me. > > Not sure what is different on your side :-/ > > I could send you the recipe my clusters us

Bug#1094487: patroni: pg_clonecluster_patroni fails: Error: cluster configuration already exists

2025-02-10 Thread Michael Banck
Hi, On Wed, Jan 29, 2025 at 07:01:00PM +, Ben Harris wrote: > On Wed, 29 Jan 2025, Ben Harris wrote I tried to reproduce the reinit failure, but it always worked for me. Not sure what is different on your side :-/ > > If I add "WorkingDirectory=~" to patroni@.service, even on a current > > P

Bug#1094090: [Debichem-devel] Bug#1094090: dbcsr: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && make -j1 test ARGS\+=--verbose ARGS\+=-j1 returned exit code 2

2025-01-29 Thread Michael Banck
Hi, On Fri, Jan 24, 2025 at 09:20:23PM +0100, Lucas Nussbaum wrote: > During a rebuild of all packages in sid, your package failed to build > on amd64. > > This looks similar to #1087439 but this one is reproducible on amd64. Hrm, this one seems to be a runtime OpenMPI failure, #1087439 appears

Bug#1087987: [Debichem-devel] Bug#1087987: cp2k: build-depends on libelpa-dev which is no longer available on 32-bit architectures

2025-01-20 Thread Michael Banck
Hi, On Thu, Nov 21, 2024 at 01:17:23PM +0100, Emilio Pozuelo Monfort wrote: > Your package build-depends on libelpa-dev, but that package has been > removed from armel, armhf and i386 due to the removal of OpenMPI and > the lack of support for MPICH. Thus cp2k should drop elpa support > on those a

Bug#1093086: [Debichem-devel] Bug#1093086: rdkit: FTBFS on big-endian architectures

2025-01-15 Thread Michael Banck
forwarded 1093086 https://github.com/rdkit/rdkit/issues/8172 thanks Hi, On Thu, Jan 16, 2025 at 09:39:08AM +0200, Andrius Merkys wrote: > However, the issue with FTBFS on big-endian architectures persists. Yeah :-/ > We may have to drop the support for big-endians as well. I opened an upstream

Bug#1093086: [Debichem-devel] Bug#1093086: Bug#1093086: Bug#1093086: rdkit: FTBFS on big-endian architectures

2025-01-15 Thread Michael Banck
Hi, On Wed, Jan 15, 2025 at 05:36:48PM +0100, Michael Banck wrote: > On Wed, Jan 15, 2025 at 04:56:10PM +0200, Andrius Merkys wrote: > > On 2025-01-15 09:54, Andrius Merkys wrote: > > > From a quick glance it seems that a lot of problems are related to > > > Python p

Bug#1093086: [Debichem-devel] Bug#1093086: Bug#1093086: rdkit: FTBFS on big-endian architectures

2025-01-15 Thread Michael Banck
Hi, On Wed, Jan 15, 2025 at 04:56:10PM +0200, Andrius Merkys wrote: > On 2025-01-15 09:54, Andrius Merkys wrote: > > From a quick glance it seems that a lot of problems are related to > > Python pickle reading. Upstream has made some fixes related to > > endianness in version 202409.4 [1], thus p

Bug#1083076: [Debichem-devel] Bug#1083076: Bug#1083076: 1083076 affects armel too

2025-01-11 Thread Michael Banck
Hi Andrius, On Mon, Dec 23, 2024 at 01:27:35PM +0200, Andrius Merkys wrote: > Since the freeze is drawing near, and rdkit is blocking a lot of packages, I > would suggest considering shipping rdkit without 32bit support in trixie. > This would cause all its dependencies to follow suit, which is no

Bug#1089936: ITS: cthumb

2024-12-15 Thread Michael Banck
Hi, On Sat, Dec 14, 2024 at 10:03:55PM +0100, Andreas Tille wrote: > I'm interested in salvaging your package cthumb, in accordance with the > Package Salvaging procedure outlined in the Developers Reference[1]. Ok, go ahead! Michael

Bug#1083076: [Debichem-devel] Bug#1083076: 1083076 affects armel too

2024-11-28 Thread Michael Banck
Hi, On Thu, Nov 28, 2024 at 09:40:01AM +0200, Andrius Merkys wrote: > The same issue persists on armel too. I think we should add autopkgtest to > possibly identify other architectures having this issue. Looks like to be a general 32bit issue, the same testsuite failures can be seen on i386 as we

Bug#1055110: [Debichem-devel] Bug#1055110: libgridxc builds with -march=native

2024-11-14 Thread Michael Banck
Hi, one clarification: On Thu, Nov 14, 2024 at 09:20:09PM +0100, Michael Banck wrote: > libgridxc is not setting that, maybe cmake did in the past? Guess I was grepping only through the 2.0.2 source tree, as they did fix it upstream for that release, sorry: https://gitlab.com/siesta-proj

Bug#1077055: [Debichem-devel] Bug#1077055: Bug#1077055: Bug#1077055: Bug#1077055: postgresql-16-rdkit: inchi support not included in rdkit build

2024-09-24 Thread Michael Banck
Hi, On Tue, Sep 24, 2024 at 05:42:50PM +0200, Michael Banck wrote: > On Tue, Sep 24, 2024 at 05:22:58PM +0300, Andrius Merkys wrote: > > On 2024-09-24 17:09, David Lounsbrough wrote: > > > I ran this inside my Docker container, it says the latest version of the > >

Bug#1077055: [Debichem-devel] Bug#1077055: Bug#1077055: Bug#1077055: postgresql-16-rdkit: inchi support not included in rdkit build

2024-09-24 Thread Michael Banck
Hi, On Tue, Sep 24, 2024 at 05:22:58PM +0300, Andrius Merkys wrote: > On 2024-09-24 17:09, David Lounsbrough wrote: > > I ran this inside my Docker container, it says the latest version of the > > package is installed: > > > > # apt-get -s install postgresql-16-rdkit > > Reading package lists...

Bug#1075399: Status of psicode

2024-09-21 Thread Michael Banck
Hi, On Sat, Sep 21, 2024 at 07:36:28AM +0200, Andreas Tille wrote: > Am Fri, Sep 20, 2024 at 10:43:29PM +0200 schrieb Michael Banck: > > > There's a link to the github page in the top bar of the > > > https://psicode.org website, it is at https://github.com/psi4/psi4/

Bug#1075399: [Debichem-devel] Bug#1075399: Status of psicode

2024-09-20 Thread Michael Banck
Hi, On Fri, Sep 20, 2024 at 09:27:28PM +0200, Michael Banck wrote: > On Fri, Sep 20, 2024 at 09:17:43PM +0200, Andreas Tille wrote: > > psicode showed up today as Bug of the Day[1] candidate. I checked the > > situation upstream[2] but I need to admit I do not have any clue

Bug#1075399: [Debichem-devel] Status of psicode

2024-09-20 Thread Michael Banck
Hi, On Fri, Sep 20, 2024 at 09:17:43PM +0200, Andreas Tille wrote: > psicode showed up today as Bug of the Day[1] candidate. I checked the > situation upstream[2] but I need to admit I do not have any clue about > their versioning. They have a stable release of psi4 which is 1.9.1 (so > we are l

Bug#1071260: prometheus-postgres-exporter: pg_replication_slots metrics query fails on standbys with replication slots

2024-09-15 Thread Michael Banck
tags 1071260 +fixed-upstream thanks Hi, On Mon, Aug 05, 2024 at 02:32:02PM +0200, Michael Banck wrote: > On Sat, Jun 08, 2024 at 04:44:41PM +0200, Daniel Swarbrick wrote: > > No sooner than I had posted my previous reply, I discovered that there is in > > fact already an upst

Bug#1071260: prometheus-postgres-exporter: pg_replication_slots metrics query fails on standbys with replication slots

2024-08-05 Thread Michael Banck
Hi Daniel, sorry, for some reason, I never got your answeres, I think my mail provider might've flagged them and eventually discarded them :-/ On Sat, Jun 08, 2024 at 04:44:41PM +0200, Daniel Swarbrick wrote: > No sooner than I had posted my previous reply, I discovered that there is in > fact al

Bug#1074786: check-pgbackrest: Breaks with current pgBackRest (3-part version)

2024-07-03 Thread Michael Banck
Package: check-pgbackrest Version: 2.3-1 Severity: important Tags: upstream Hi, check_pgbackrest fails with the current (2.52.1) patch-fix release of pgBackRest: |Argument "2.52.1\n" isn't numeric in numeric lt (<) at /usr/bin/check_pgbackrest line 591. See also upstream the issue: https://g

Bug#1073561: [Debichem-devel] Bug#1073561: openbabel: FTBFS: failing tests test_tautomer_2[27]

2024-06-30 Thread Michael Banck
Hi, On Sat, Jun 29, 2024 at 10:21:02PM +0300, Adrian Bunk wrote: > On Mon, Jun 17, 2024 at 04:58:46PM +0300, Andrius Merkys wrote: > > Source: openbabel > > Version: 3.1.1+dfsg-9 > > Severity: serious > > Justification: FTBFS > > Tags: trixie sid ftbfs > > > > Hi, > > > > openbabel FTBFS both in

Bug#1072106: azure-cli: az ad sp create-for-rbac results in python error

2024-05-28 Thread Michael Banck
Package: azure-cli Version: 2.45.0-1 Severity: normal Running this results in a traceback for me on Debian 12: $ az ad sp create-for-rbac --name foo --role Contributor --scopes /subscriptions/ Creating 'Contributor' role assignment under scope '/subscriptions/' Role assignment creation failed.

Bug#1071260: prometheus-postgres-exporter: pg_replication_slots metrics query fails on standbys with replication slots

2024-05-17 Thread Michael Banck
Package: prometheus-postgres-exporter Version: 0.11.1-3+b5 Severity: normal Tags: patch Hi, if prometheus-postgres-exporter runs on a standby, and that standby has physical replication slots, then the pg_replication_slots metrics queries throws an error (see also upstream issues #547 [0] and #962

Bug#1063752: [Debichem-devel] Bug#1063752: custodian: Inappriate maintainer address

2024-03-08 Thread Michael Banck
Hi, On Tue, Feb 13, 2024 at 11:24:15AM +0100, Drew Parsons wrote: > Source: custodian > Followup-For: Bug #1063752 > X-Debbugs-Cc: Debichem Team > Control: reassign 1063752 lists.debian.org > Control: affects 1063752 src:custodian > > Scott Kitterman reported that lists.alioth.debian.org is boun

Bug#1059476: please reopen - still happens with 15.6

2024-02-23 Thread Michael Banck
Hi, On Sat, Feb 17, 2024 at 09:54:22AM +0100, Clemens Eisserer wrote: > | can you try to upgrade and check whether your > | problamatic case is fixed as well? If not, I will reopen this bug > | report. > | are usually very bad memory leaks > | due to the way PostgreSQL uses LLVM. > > I've just te

Bug#1019503: postgresql-13: memory leak with JIT compilation

2024-01-03 Thread Michael Banck
tags 1019503 +pending thanks Hi, On Sat, Sep 10, 2022 at 01:29:22PM -0400, Antoine Beaupre wrote: > We have found severe regressions when upgrading from bookworm to > bullseye on two of our PostgreSQL servers. Note that a work-around for this is (AFAIK) to set jit_inline_above_cost to 0, to avoi

Bug#1025936: Possible fix

2024-01-03 Thread Michael Banck
merge 1025936 1025937 tags 1025936 +patch tags 1025936 +pending thanks On Wed, Dec 06, 2023 at 04:06:26PM +, René Højbjerg Larsen wrote: > We use the TLS server as well, and are bothered by the same problem. > After installing pgbackrest package updates across out servers (we use > the PGDG re

Bug#1056303: pg_createcluster destroys data directory under certain conditions

2024-01-02 Thread Michael Banck
o only remove the data directory if it actually got created by pg_createcluster, so I propose the attached patch; I have also opened a merge request on Salsa for this: https://salsa.debian.org/postgresql/postgresql-common/-/merge_requests/19 Michael >From c1e61705ab9384a005a009ed6327bb4

Bug#1059277: [Debichem-devel] Bug#1059277: openbabel: CVE-2022-37331 CVE-2022-41793 CVE-2022-42885 CVE-2022-43467 CVE-2022-43607 CVE-2022-44451 CVE-2022-46280 CVE-2022-46289 CVE-2022-46290 CVE-2022-46

2023-12-22 Thread Michael Banck
forwarded 1059277 https://github.com/openbabel/openbabel/issues/2650 thanks Hi, On Fri, Dec 22, 2023 at 01:06:17PM +0100, Moritz Mühlenhoff wrote: > Source: openbabel > X-Debbugs-CC: t...@security.debian.org > Severity: important > Tags: security > > Hi, > > The following vulnerabilities were p

Bug#1057556: [Debichem-devel] Bug#1057556: elpa: FTBFS: not enough slots available

2023-12-11 Thread Michael Banck
Hi, On Mon, Dec 11, 2023 at 02:50:40PM +0100, Santiago Vila wrote: > El 11/12/23 a las 14:08, Michael Banck escribió: > > So you are building elpa on a machine/vm with one cpu/vcore apparently? > > No. In this case the build was made on an AWS machine of type m6a.large, > which

Bug#1057556: [Debichem-devel] Bug#1057556: elpa: FTBFS: not enough slots available

2023-12-11 Thread Michael Banck
severity 1057556 normal retitle 1057556 elpa: FTBFS unless machine has more than one vcore thanks Hi Santiago, On Tue, Dec 05, 2023 at 11:05:01PM +0100, Santiago Vila wrote: > Package: src:elpa > Version: 2022.11.001-2 > Severity: serious > Tags: ftbfs > > Dear maintainer: > > During a rebuild

Bug#1053548: check-patroni: does not work well with current Patroni

2023-12-04 Thread Michael Banck
Hi David, On Mon, Oct 23, 2023 at 07:17:11PM +0200, David Prévot wrote: > First of all thanks a lot for your bug report! Sorry that it took me so long to reply now :-/ > Le Fri, Oct 06, 2023 at 09:11:32AM +0200, Michael Banck a écrit : > > Package: check-patroni > >

Bug#967333: exult: depends on deprecated GTK 2

2023-10-22 Thread Michael Banck
Hi, On Sat, Oct 21, 2023 at 02:35:02AM +0200, Bastian Germann wrote: > Control: block -1 by 967394 > > The GIMP plugin is the only thing that needs GTK 2. I've dropped the libgtk2.0-dev Build-Dependency from exult now, but yeah, libgtk2.0 is still picked up via GIMP for the binary package. Mic

Bug#1054177: [Debichem-devel] Bug#1054177: src:cp2k: fails to migrate to testing for too long: no longer buildable on armel

2023-10-18 Thread Michael Banck
Hi, On Wed, Oct 18, 2023 at 07:28:14PM +0200, Paul Gevers wrote: > If you believe your package is unable to migrate to testing due to issues > beyond your control, don't hesitate to contact the Release Team. I am not sure it is out of my control or not, but the issue seems to be that armel is not

Bug#1053548: check-patroni: does not work well with current Patroni

2023-10-06 Thread Michael Banck
Package: check-patroni Version: 1.0.0-1 Severity: normal Tags: patch Hi, since version 3.0.4, Patroni displays "streaming" as state if a node is actually replicating from its leader. This is taken into account by check-patroni 1.0.0 (see https://github.com/dalibo/check_patroni/pull/30). However

Bug#1052028: please update to pydantic 2.x

2023-09-16 Thread Michael Banck
Hi Timo, On Sat, Sep 16, 2023 at 12:26:32PM +0200, Timo Röhling wrote: > I would like to have pydantic updated to the latest 2.x major release, > because rstcheck depends on it. > > The 2.x API has some breaking changes, but according to the pydantic > README, version 1.10.4 is shipped as pydanti

Bug#1051986: scalapack: cmake files miss multiarch, referencing missing file

2023-09-15 Thread Michael Banck
Source: scalapack Version: 2.2.1-2 Severity: serious Hi, I'm building a package that can use scalapack; it uses cmake as build system and fails configuring as such: |dh_auto_configure -- \ | -DCMAKE_BUILD_TYPE= \ | -DBUILD_SHARED_LIBS=NO

Bug#1027025: [Debichem-devel] Bug#1027025: psi4: FTBFS with Python 3.11 as default version

2023-01-07 Thread Michael Banck
Hi James, On Thu, Jan 05, 2023 at 04:14:24PM +, James Addison wrote: > Source: psi4 > Version: 1:1.3.2+dfsg-3 > Followup-For: Bug #1027025 > > I've opened a merge request[1] to address what I thought was a > cmake-related build failure cause on Python 3.11, described in my > previous message.

Bug#1026294: vip-manager: FTBFS: cannot use c.VIP (variable of type net.IP) as type netip.Addr in argument to arp.NewPacket

2023-01-04 Thread Michael Banck
Hi, On Sat, Dec 17, 2022 at 10:08:45PM +, Mathias Gibbens wrote: > Source: vip-manager > Version: 1.0.2-3 > Severity: serious > Justification: FTBFS > Tags: bookworm sid ftbfs > > vip-manager is failing to build in a clean sid schroot: > > > github.com/cybertec-postgresql/vip-manager/ipman

Bug#1022469: python-pint: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p 3.10 returned exit code 13

2022-12-03 Thread Michael Banck
tags 1022469 +patch thanks Hi, On Wed, Nov 23, 2022 at 07:48:47PM +1100, Stuart Prescott wrote: > pint is incompatible with babel > 2.8; unfortunately, Debian now has babel > 2.10. > > So far, upstream has only noted the compatibility with version pinning. > > https://github.com/hgrecco/pint/is

Bug#1006788: [Debichem-devel] Bug#1006788: bagel: autopkgtest failure with new mpich.

2022-11-27 Thread Michael Banck
Hi, On Wed, Aug 17, 2022 at 10:25:38PM +0200, Paul Gevers wrote: > Control: severity -1 serious > Control: retitle -1 autopkgtest fails on hosts with lots of RAM/cores > > Hi, > > On Sun, 3 Apr 2022 19:42:42 +0200 Michael Banck wrote: > > Hrm, it seems that test case

Bug#1021057: [Debichem-devel] Bug#1021057: cp2k autopkgtest times outs on armel

2022-10-30 Thread Michael Banck
Hi Paul, On Sat, Oct 01, 2022 at 11:53:27AM +0200, Paul Gevers wrote: > Source: cp2k > Version: 6.1-2 I guess that was supposed to be 9.1-2, as that is (was) current and the log you referenced also has that. I agree with Adrian and downgraded this bug to important for now. Michael

Bug#1005202: [Debichem-devel] Bug#1005202: openmolcas: Is the -fno-expensive-optimizations flag still needed?

2022-06-11 Thread Michael Banck
Hi João, On Tue, Feb 08, 2022 at 11:31:20PM +, João wrote: > Source: openmolcas > Version: 21.10-1 > Severity: normal > > Dear Maintainer, > > Is the compiler flag -fno-expensive-optimizations in debian/rules still > needed? > This flag was introduced to fix a problem with the arm64 build a

Bug#1008355: python-ldap: _slaptest.py fails with "slapd exited before opening port", breaking other package builds

2022-04-24 Thread Michael Banck
Hi, On Sun, Apr 24, 2022 at 02:49:41PM +0200, Michael Banck wrote: > If I apply the mentioned (and attached patch), slapd starts up fine: > > |>>> import slapdtest > |>>> server = slapdtest.SlapdObject() > |>>> server.start() > |starting slapd: %r

Bug#1008355: django-auth-ldap: FTBFS: dh_auto_test: error: pybuild --test -i python{version} -p "3.10 3.9" --system=custom "--test-args=PYTHONPATH=. {interpreter} /usr/bin/django-admin test --settings

2022-04-24 Thread Michael Banck
forwarded 1008355 https://github.com/python-ldap/python-ldap/issues/422 tags +patch thanks Hi, On Sun, Apr 24, 2022 at 01:21:33PM +0200, Michael Banck wrote: > This error comes from python3-ldap's slaptest: > > |$ python3 > |Python 3.10.4 (main, Apr 2 2022, 09:04:19) [GCC

Bug#1008355: django-auth-ldap: FTBFS: dh_auto_test: error: pybuild --test -i python{version} -p "3.10 3.9" --system=custom "--test-args=PYTHONPATH=. {interpreter} /usr/bin/django-admin test --settings

2022-04-24 Thread Michael Banck
reassign 1008355 python-ldap retitle 1008355 python-ldap: _slaptest.py fails with "slapd exited before opening port", breaking other package builds notfound 3.0.0-1 found 1008355 3.2.0-4 thanks Hi, On Sat, Mar 26, 2022 at 09:35:43PM +0100, Lucas Nussbaum wrote: > During a rebuild of all packages

Bug#1009281: [Debichem-devel] Bug#1009281: Bug#1009281: Should cinfony be removed?

2022-04-11 Thread Michael Banck
Hi, On Mon, Apr 11, 2022 at 08:38:21AM +0300, Andrius Merkys wrote: > Hi, > > On 2022-04-11 01:35, Moritz Muehlenhoff wrote: > > Source: cinfony > > Version: 1.2-4 > > Severity: serious > > > > Your package came up as a candidate for removal from Debian: > > > > - Still depends on Python 2 and

Bug#1006788: Bug#1006788: bagel: autopkgtest failure with new mpich.

2022-04-06 Thread Michael Banck
severity 1006788 important thanks On Sun, Apr 03, 2022 at 07:42:42PM +0200, Michael Banck wrote: > On Sun, Apr 03, 2022 at 02:30:14PM +0200, Michael Banck wrote: > > On Fri, Mar 04, 2022 at 11:36:24PM +, peter green wrote: > > > Package: bagel > > > Version: 1.2.

Bug#1006788: [Debichem-devel] Bug#1006788: Bug#1006788: bagel: autopkgtest failure with new mpich.

2022-04-03 Thread Michael Banck
Hi, On Sun, Apr 03, 2022 at 02:30:14PM +0200, Michael Banck wrote: > On Fri, Mar 04, 2022 at 11:36:24PM +, peter green wrote: > > Package: bagel > > Version: 1.2.2-3 > > Severity: serious > > x-debbugs-cc: mp...@packages.debian.org > > > > bagel'

Bug#1006788: [Debichem-devel] Bug#1006788: bagel: autopkgtest failure with new mpich.

2022-04-03 Thread Michael Banck
On Fri, Mar 04, 2022 at 11:36:24PM +, peter green wrote: > Package: bagel > Version: 1.2.2-3 > Severity: serious > x-debbugs-cc: mp...@packages.debian.org > > bagel's autopkgtest is failing on amd64 with mpich 4.0.1-1 and hence > blocking it's migration to testing and hence blocking the finali

Bug#1006184: [Debichem-devel] Bug#1006184:

2022-02-26 Thread Michael Banck
Hi, On Sat, Feb 26, 2022 at 11:20:38AM +0100, Aritz Erkiaga wrote: > I believe this is incorrect. Those two commits only close #1005006, while > #1006184 is closed by the single commit linked in this bug report. All > *three* commits have been merged into upstream, fixing both bugs. For > clarific

Bug#1005006: [Debichem-devel] Bug#1005006: avogadro: manipulation tools do not work

2022-02-24 Thread Michael Banck
Hi, On Thu, Feb 24, 2022 at 03:06:29AM +0100, Aritz Erkiaga wrote: > On 2/23/22 09:12, Michael Banck wrote: > > I think the first step would be to get the PR merged upstream, then we > > can merge it as a patch in Debian. > > > > I don't have the bandwidth right n

Bug#1005006: [Debichem-devel] Bug#1005006: avogadro: manipulation tools do not work

2022-02-23 Thread Michael Banck
Hi, On Wed, Feb 23, 2022 at 03:58:55AM +0100, Aritz Erkiaga wrote: > I've sent a pull request upstream to fix this bug: > https://github.com/OpenChemistry/avogadrolibs/pull/825 > > While I'm very sure the fix can't cause further breakage, I'm still unsure > how the problem actually arises. I thi

Bug#889714: Bug #889714: chmod: cannot access '/var/lib/etcd/': No such file or directory

2022-02-14 Thread Michael Banck
severity 889714 serious thanks On Tue, Feb 06, 2018 at 10:36:41AM +0100, Christoph Berg wrote: > Package: etcd-server > Version: 3.2.9+dfsg-3 > Severity: important > > If etcd is already present in /etc/passwd, but /var/lib/etcd is > missing, installing etcd-server fails: > > Setting up etcd-ser

Bug#995123: cyrus-sasl2 FTBFS: sphinx: AttributeError: 'CyrusManualPageBuilder' object has no attribute 'settings'

2021-10-27 Thread Michael Banck
tags 995123 +pending thanks Am Montag, dem 25.10.2021 um 14:58 +0200 schrieb Michael Banck: > On Sun, Sep 26, 2021 at 06:39:54PM -0700, Vagrant Cascadian wrote: > > I tested the attached patch which seems to fix this. > > This FTBFS has been open for about a month - are you

Bug#995123: cyrus-sasl2 FTBFS: sphinx: AttributeError: 'CyrusManualPageBuilder' object has no attribute 'settings'

2021-10-25 Thread Michael Banck
ard. Michael -- Michael Banck Team Lead PostgreSQL Project Manager Tel.: +49 2166 9901-171 Mail: michael.ba...@credativ.de credativ GmbH, HRB Mönchengladbach 12080 USt-ID-Nummer: DE204566209 Trompeterallee 108, 41189 Mönchengladbach Management: Dr. Michael Meskes, Geoff Richardson, Peter Lilley

Bug#995157: libfido2: FTBFS with openssl3: error: ‘SHA256_Init’ is deprecated: Since OpenSSL 3.0)

2021-10-12 Thread Michael Banck
tags 995157 +patch thanks Hi, the attach patch/debdiff fixes the build for me. Cheers, Michael -- Michael Banck Team Lead PostgreSQL Project Manager Tel.: +49 2166 9901-171 Mail: michael.ba...@credativ.de credativ GmbH, HRB Mönchengladbach 12080 USt-ID-Nummer: DE204566209 Trompeterallee

Bug#950232: software-properties-common: Wrong URL for Bullseye security updates

2021-10-12 Thread Michael Banck
Hi, What I see is this: If in software-properties-gtk I swith from "Main server" to "German Server" (paraphrased), this diff gets written to sources.list: -deb http://security.debian.org/debian-security bullseye-security main contrib non-free +deb http://ftp.de.debian.org/debian/ bullseye-securi

Bug#995152: FTBFS with openssl3: assignment discards const qualifier from pointer target type (-Werror=discarded-qualifiers)

2021-10-05 Thread Michael Banck
retitle 995152 krb5: FTBFS with openssl3: assignment discards const qualifier from pointer target type (-Werror=discarded-qualifiers) user pkg-openssl-de...@lists.alioth.debian.org usertags 995152 ftbfs-3.0 thanks

Bug#995157: FTBFS with openssl3: error: ‘SHA256_Init’ is deprecated: Since OpenSSL 3.0

2021-10-05 Thread Michael Banck
user pkg-openssl-de...@lists.alioth.debian.org usertags 995157 ftbfs-3.0 thanks

Bug#992891: Please package 1.8.2

2021-10-05 Thread Michael Banck
Hi Sandro, On Mon, Oct 04, 2021 at 11:48:39PM -0400, Sandro Tosi wrote: > On Tue, 24 Aug 2021 22:44:48 +0500 Andrey Rahmatullin wrote: > > New python3-itemadapter supports pydantic, but only 1.8+ (as it uses > > allow_mutation) so I would be glad if it's updated to the latest version. > > Thank y

Bug#871622: [Bug #871622]: hello: please include a trivial autopkgtest for this trivial package

2021-10-03 Thread Michael Banck
Hi, I noticed Matthias' patch doesn't apply anymore and that hello grew a "skip" test with exit status 77 that trips over the trivial shell loop, so I've skipped it there. New patch attached. Michael diff -Nru hello-2.10/debian/changelog hello-2.10/debian/changelog --- hello-2.10/debian/changel

Bug#995157: FTBFS with openssl3: error: ‘SHA256_Init’ is deprecated: Since OpenSSL 3.0

2021-09-27 Thread Michael Banck
Source: libfido2 Version: 1.8.0-1 Severity: important Dear Maintainer, libfido2 fails to build with openssl3 from experimental: |[ 0%] Building C object src/CMakeFiles/fido2.dir/aes256.c.o |cd /<>/obj-x86_64-linux-gnu/src && /usr/bin/cc -DHAVE_CBOR_H -DHAVE_CLOCK_GETTIME -DHAVE_DEV_URANDOM -DH

Bug#995152: FTBFS with openssl3: assignment discards const qualifier from pointer target type (-Werror=discarded-qualifiers)

2021-09-27 Thread Michael Banck
Source: krb5 Version: 1.18.3-7 Severity: important Tags: patch Dear maintainer, krb5 fails to build with openssl3 from experimental: |make[4]: Entering directory '/<>/build/tests/softpkcs11' |gcc -fPIC -DSHARED -DHAVE_CONFIG_H -I../../include -I../../../src/include -I../../../src/plugins/preau

Bug#994288: [Debichem-devel] Bug#994288: Bug#994288: libinchi1: feature request, add InChI trust, reference executable

2021-09-19 Thread Michael Banck
Hi Norwid, On Sat, Sep 18, 2021 at 09:03:45PM +, Norwid Behrnd wrote: > On Sat, 18 Sep 2021 20:28:30 +0200 > Michael Banck wrote: > > On Thu, Sep 16, 2021 at 10:40:02AM +0300, Andrius Merkys wrote: > > > Control: owner -1 ! > > > Control: tags -1 +

Bug#994288: [Debichem-devel] Bug#994288: Bug#994288: libinchi1: feature request, add InChI trust, reference executable

2021-09-18 Thread Michael Banck
Hi, On Thu, Sep 16, 2021 at 10:40:02AM +0300, Andrius Merkys wrote: > Control: owner -1 ! > Control: tags -1 + pending > > Hi Norwid, > > On 2021-09-16 09:26, Norwid Behrnd wrote: > >> Am I right to assume you are requesting here for the 'inchi_main' > >> executable being included in Debian pack

Bug#991920: please demote pkg-config to Recommends

2021-08-27 Thread Michael Banck
On Thu, Aug 05, 2021 at 10:21:30PM +0200, Michael Banck wrote: > I've run "dracut --no-kernel" in a minimal lxc container, once with > pkg-config and once without and then diffoscope'd the two generated > initrds. Most of what diffoscope complains about are timestamp

Bug#991920: Acknowledgement (please demote pkg-config to Recommends)

2021-08-05 Thread Michael Banck
I've run "dracut --no-kernel" in a minimal lxc container, once with pkg-config and once without and then diffoscope'd the two generated initrds. Most of what diffoscope complains about are timestamp differences in directories and symlinks which I don't know how to get rid of, but there's some chang

Bug#991920: please demote pkg-config to Recommends

2021-08-05 Thread Michael Banck
Package: dracut-core Version: 051-1 Severity: wishlist Dear Maintainer, dracut may be used in minimal systems. If that is the case, dracut-core drags in perl via pkg-config. However, it seems pkg-config is an optional part of dracut (and is indeed not shipped as a dependency for the RPM package i

Bug#990119: vip-manager: systemd service file uses incorrect parameter syntax

2021-07-16 Thread Michael Banck
7;ll try to overhaul this for bookworm. I also uploaded a new package candidate to https://people.debian.org/~mbanck/.tmp/vip-manager_1.0.1-4_amd64.deb if you want to test it. Or just build it yourself from the salsa repo. Michael -- Michael Banck Projektleiter / Senior Berater Tel.: +49 2166 9901-171

Bug#987963: [Debichem-devel] Bug#987963: pymol: flaky autopkgtest on arm64: hits autopkgtest timeout

2021-05-22 Thread Michael Banck
Hi, On Sun, May 02, 2021 at 09:17:26PM +0200, Paul Gevers wrote: > Run 'pymol -c > /tmp/autopkgtest-lxc.q81vxtos/downtmp/build.HQz/src/examples/cookbook/scenes2movie.pml'... > :1: DeprecationWarning: the imp module is deprecated in favour > of importlib; see the module's documentation for alternat

Bug#987963: [Debichem-devel] Bug#987963: pymol: flaky autopkgtest on arm64: hits autopkgtest timeout

2021-05-22 Thread Michael Banck
Hi Paul, On Sun, May 02, 2021 at 09:17:26PM +0200, Paul Gevers wrote: > Source: pymol > Version: 2.4.0+dfsg-1 > Severity: serious > Tags: sid bullseye > X-Debbugs-CC: debian...@lists.debian.org > User: debian...@lists.debian.org > Usertags: flaky > > Dear maintainer(s), > > Your package has an a

Bug#983864: RM: abinit [mips64el mipsel] -- RoQA; no longer builds on mips*

2021-03-27 Thread Michael Banck
Hi ftp-master, as abinit's maintainer/upload, ping on this, I think this blocks abinit from migrating to bullseye. Thanks, Michael

Bug#985269: [Debichem-devel] Bug#985269: libint1: ships broken library symlinks: /usr/lib/lib*-stable.so.1 -> lib*.so.1

2021-03-15 Thread Michael Banck
Hi, On Mon, Mar 15, 2021 at 10:40:09AM +0100, Andreas Beckmann wrote: > during a test with piuparts I noticed your package ships (or creates) > a broken symlink. Thanks for the report. > From the attached log (scroll to the bottom...): > > libint1: MISSING OBJECT /usr/lib/libderiv-stable.so.

Bug#985067: unblock: libint/1.2.1-5

2021-03-12 Thread Michael Banck
able; urgency=medium + + * Team upload + * Add Breaks on psi4 (<< 1:1.3.2+dfsg-1) + + -- Graham Inggs Thu, 04 Mar 2021 14:25:43 + + +libint (1.2.1-4) unstable; urgency=medium + + * debian/rules (override_dh_auto_configure): Increase angular momentum +configure options by one. + +

Bug#983246: RM: quantum-espresso [armel] -- ROM; out-of-date package; current package not able to pass QA

2021-02-21 Thread Michael Banck
Package: ftp.debian.org Severity: normal Hi, please remove the outdated armel binary for quantum-espresso; this version only built because the testsuite failed to run properly; the current version aborts during the testsuite. Thanks, Michael

Bug#983040: [Debichem-devel] Bug#983040: rdkit: doesn't ship with inchi support enabled

2021-02-18 Thread Michael Banck
tags 983040 +wontfix merge 983040 964773 thanks On Thu, Feb 18, 2021 at 03:35:21PM +0200, Andrius Merkys wrote: > On 2021-02-18 15:27, Michael Banck wrote: > > On Thu, Feb 18, 2021 at 02:48:49PM +0900, Francois Berenger wrote: > >> --- > >> python3 > >> impo

Bug#983040: rdkit: doesn't ship with inchi support enabled

2021-02-18 Thread Michael Banck
Package: rdkit Severity: wishlist Hi Francois, On Thu, Feb 18, 2021 at 02:48:49PM +0900, Francois Berenger wrote: > --- > python3 > import rdkit > from rdkit import Chem > rdkit.Chem.INCHI_AVAILABLE > # False > --- > > It would be nice if INCHI support is enabled > when building rdkit for Debian

Bug#980854: [Debichem-devel] Bug#980854: gabedit: Wrong homepage

2021-01-23 Thread Michael Banck
Hi, On Sat, Jan 23, 2021 at 09:36:23AM +0100, Davide Prina wrote: > Package: gabedit > Version: 2.5.1~20200828-1 > Severity: normal > > I have see that the project homepage do not respond anymore: > https://gabedit.sourceforge.net/ Thanks for the report! > I think that the homepage is now: > h

Bug#979983: [Debichem-devel] Bug#979983: qcelemental downloads from the internet during the build

2021-01-12 Thread Michael Banck
Hi, On Tue, Jan 12, 2021 at 05:31:51PM +0200, Adrian Bunk wrote: > matchobj = > > def process_pubchem(matchobj): > pubsearch = matchobj.group("pubsearch") > > # search pubchem for the provided string > try: > results = pubchem.get_pubchem_results(pubs

Bug#979339: APBS tools in the packages

2021-01-10 Thread Michael Banck
fixed 979339 1.5+dfsg1-1 thanks On Fri, Jan 08, 2021 at 12:09:06PM +, Athanasios Anastasiou wrote: > Having compiled the tools, they are binaries and therefore probably better > to be included in apbs. I had a look a this now, and it turns out that we are already shipping them in the apbs pac

Bug#979708: devscripts: origtargz should print some status message before running pristine-tar

2021-01-10 Thread Michael Banck
ot;;' before running pristine-tar checkout would be nice, as other methods do yield output as well. -- Package-specific info: --- /etc/devscripts.conf --- --- ~/.devscripts --- DEBFULLNAME="Michael Banck" DEBEMAIL="mba...@debian.org" DEBSIGN_KEYID=B43481B0 -- System In

Bug#979339: APBS tools in the packages

2021-01-05 Thread Michael Banck
On Tue, Jan 05, 2021 at 03:02:02PM +, Athanasios Anastasiou wrote: > Thank you very much for the quick response, I think it would be useful to > include them with apbs more generally. Perhaps even as apbs-tools (?). We'll see; one problem is that the freeze for the next Debian release is prett

Bug#979339: APBS tools in the packages

2021-01-05 Thread Michael Banck
Package: apbs Version: 1.4.2.1-1 Severity: wishlist Hi Athanasios, On Tue, Jan 05, 2021 at 02:50:15PM +, Athanasios Anastasiou wrote: > I am looking at APBS' documentation at: > https://apbs.readthedocs.io/en/latest/using/tools.html?highlight=similarity > > And I can see a number of tools, w

Bug#979041: closed by Debian FTP Masters (reply to Alastair McKinstry ) (Bug#979041: fixed in openmpi 4.1.0-4)

2021-01-04 Thread Michael Banck
reopen 979041 thanks Hi, On Mon, Jan 04, 2021 at 09:36:06AM +, Debian Bug Tracking System wrote: >* Fix for missing plugin mca_op_avx.so. Closes: #979041, #978496 This change fixes the mca_op_avx.so issues, but at least my testing shows this abort is still there when trying to run the gp

Bug#979071: ITP: neci -- Full Configuration Interaction Quantum Monte Carlo Code

2021-01-02 Thread Michael Banck
Package: wnpp Severity: wishlist Owner: Michael Banck * Package name: neci Version : git snapshot Upstream Author : George H. Booth and Ali Alavi * URL : https://github.com/ghb24/NECI_STABLE * License : GPLv3 Programming Lang: Fortran90 Description

Bug#979041: libopempi3: aborts python code due to libfabric fork() issues

2021-01-02 Thread Michael Banck
Package: libopenmpi3 Version: 4.1.0-3 Severity: serious The revert of pmix has fixed some issues, but python packages still show autopkgtest regressions in dolfin[1], gpaw[2], gyoto[3] and mshr[4] . The error is always like this: |A process has executed an operation involving a call |to the fork(

Bug#977230: bagel FTBFS with Boost 1.74

2021-01-01 Thread Michael Banck
reassign 977230 libboost-serialization1.74-dev thanks On Fri, Jan 01, 2021 at 06:58:24PM +0200, Adrian Bunk wrote: > On Fri, Jan 01, 2021 at 01:07:25PM +0100, Michael Banck wrote: > > I tried to look at it, but it's unclear to me where BAGEL is being at > > fault, it seems t

Bug#977230: bagel FTBFS with Boost 1.74

2021-01-01 Thread Michael Banck
Hi, On Sat, Dec 12, 2020 at 09:45:10PM +0200, Adrian Bunk wrote: > Source: bagel > Version: 1.2.2-1 > Severity: serious > Tags: ftbfs bullseye sid > > https://buildd.debian.org/status/fetch.php?pkg=bagel&arch=amd64&ver=1.2.2-1%2Bb2&stamp=1607773477&raw=0 > > ... > /usr/include/boost/property_tre

Bug#978022: libopenmpi3 Runtime failure opal_pmix_base_select failed

2020-12-24 Thread Michael Banck
Package: libopenmpi3 Version: 3.1.3-11 Severity: serious Even with the fixed libpmix2_4.0.0~rc1-2, I am getting runtime failures trying to run MPI programs, e.g. the nwchem autopkgtests all fail like this: | Running tests/water/water_md | | cleaning scratch | copying input and verified

Bug#977873: libpmix2: broken library symlink

2020-12-22 Thread Michael Banck
Package: libpmix2 Version: 4.0.0~rc1-1 Severity: serious It seems the 4.0.0 upload did not update the convenience /usr/lib//libpmix.so.* symlink, it is pointing nowehere in the data.tar.gz (and dpkg seems to refuse to unpack/create it, cause I don't have it in my unstable chroot): (unstable-amd64

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