Re: Re error after installing cygwin64 4.3.1.1

2016-01-27 Thread Marco Atzeri
On 27/01/2016 05:24, Robert May wrote: Marco what I have done is in makefile line 26CFLAGS = -g -Wall -O2 -std=gnu99 ## added -std=gnu99 above line 66 ALL_LDFLAGS = $(HTSLIB_LDFLAGS) $(LDFLAGS) ## remove -rdynamic from ALL_LDFLAGS above and this is the result of the next make run Robert@

Re error after installing cygwin64 4.3.1.1

2016-01-26 Thread Robert May
Marco what I have done is in makefile line 26CFLAGS   = -g -Wall -O2   -std=gnu99 ## added -std=gnu99 above line 66 ALL_LDFLAGS  =  $(HTSLIB_LDFLAGS) $(LDFLAGS) ## remove -rdynamic from ALL_LDFLAGS above and this is the result of the next make run Robert@DESKTOP-14EL82S /usr/local/bin/samtools-1.

Re error after installing cygwin64 4.3.1.1

2016-01-25 Thread Robert May
Marco The choice of using usr/local/bin was the way to go according to the INSTALL instructions with most of the programs. some use ./confire    -    make - make install some use  make make install I think one used just make and one used Build. If I remember the wording correc