Re: [Beowulf] Southampton's RPi cluster is cool but too many cables?

2012-09-18 Thread Christopher Samuel
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 On 19/09/12 12:04, Vincent Diepeveen wrote: > Maybe do it wireless at around a 2800Mhz frequency instead of using > cables. Then stack them all up in a 2nd hand microwave and invent > the new buzzword microwave supercomputing. "It slices! It dices!

Re: [Beowulf] Southampton's RPi cluster is cool but too many cables?

2012-09-18 Thread Lux, Jim (337C)
This is the value of building your own moderate scale cluster the first time.. Things like cable management take up a significant amount of time. And the cluster gods (anti-Grendel?) help you if you have a single bad cable in the rats nest to find. You'll be a believer in color coding, number

Re: [Beowulf] Southampton's RPi cluster is cool but too many cables?

2012-09-18 Thread Vincent Diepeveen
Maybe do it wireless at around a 2800Mhz frequency instead of using cables. Then stack them all up in a 2nd hand microwave and invent the new buzzword microwave supercomputing. On Sep 18, 2012, at 10:36 AM, Daniel Kidger wrote: > All, > > Having seen the pictures of Simon's Raspberry Pi clust

[Beowulf] Southampton's RPi cluster is cool but too many cables?

2012-09-18 Thread Daniel Kidger
All, Having seen the pictures of Simon's Raspberry Pi cluster at Southampton, one thing that strikes me is how ugly all the cables make it look. So how can this be improved - indeed is 'cable-free' possible? - The network could be Wifi using micro adapters. - USB Power could be at least daisy-cha

Re: [Beowulf] FY;) GROMACS on the Raspberry Pi

2012-09-18 Thread Daniel Kidger
Eugen, I am certainly interested ! I touched on the Gromacs port to ClearSpeed when I worked there - I then went on to write the port of AMBER to CS plus I have a pair of RPis that I tinker with. Simon Cox at Southampton did a publicity stunt recently - building a 64node RPi cluster with his youn

Re: [Beowulf] Xeon Phi

2012-09-18 Thread Daniel Kidger
John, Remember that Knight's Corner is an instance (cf IvyBridge) whereas Phi is a product line (cf Xeon) In the same way Kepler is an instance of Nvidia's Telsa line. The technology was also known as MIC : pronounced 'Mick' or 'Mike' depending on who you spoke to. That was confusing - so with PH

Re: [Beowulf] NFS over RDMA performance confusion

2012-09-18 Thread Jonathan Barber
On 13 September 2012 17:44, wrote: > >> Ok. Let me be clear, 10M as a file size is not useful as a test. The >> numbers are, for lack of any better way to describe this, meaningless. > > I am specifically testing the performance of NFSoRDMA vs NFSoTCP. I do not > want my load to go to disk. > >

Re: [Beowulf] cluster building advice?

2012-09-18 Thread Jörg Saßmannshausen
Dear all, really good advice here! I would like to add something: For a smaller cluster and if you don't want to use puppet, what I am doing is I am rsync the nodes from a local directory on the headnode. That way I can update the software easily by simply adding it to the node-directory on th