Re: [Beowulf] sgi and linux networks

2008-02-15 Thread John Leidel
Indeed Mark, they have [had] their own cluster management stack called Clusterworx. It was completely their own. On Fri, 2008-02-15 at 15:41 -0600, Geoff Jacobs wrote: > Mark Hahn wrote: > >> large compute [for one realm or another]. They're probably tired of > >> being > >> underbid on machines

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Geoff Jacobs
Joe Landman wrote: > > > Geoff Jacobs wrote: > >> Of particular interest >> rpm -qa equates to dpkg -l >> rpm -ql equates to -L >> rpm -qf equates to dpkg -S A little edit... I believe I meant dpkg -L above. > Ahhh... Rosetta stones > >> Trust me, Debian based distros are the next be

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joe Landman
Geoff Jacobs wrote: Of particular interest rpm -qa equates to dpkg -l rpm -ql equates to -L rpm -qf equates to dpkg -S Ahhh... Rosetta stones Trust me, Debian based distros are the next best thing to crack cocaine. I will take your word on that particular comparison ... What sol

[Beowulf] wajig for Ubuntu/Debian package management

2008-02-15 Thread Andrew Piskorski
On Fri, Feb 15, 2008 at 12:45:45PM -0500, Joe Landman wrote: > Subject: Re: [Beowulf] centos5 as cluster os > Tim Cutts wrote: > >apt-file : not installed by default, but phenomenally useful - it's dpkg > >-S for stuff that isn't installed yet. So if you want to ask "what > >package do I need t

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Jim Lux
Quoting Mark Hahn <[EMAIL PROTECTED]>, on Fri 15 Feb 2008 02:25:26 PM PST: I'm skeptical how much sense VM's in HPC make, though. yes, it would be nice to have a container for MPI jobs: checkpoints for free, ability to do migration. both these factors depend on the scale of your jobs: if all

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Prentice Bisbal wrote: 4 years ago, I set up kerberos for the very first time, without any prior experience. I read through the relevant chapters of the O' Reilly Kerberos book and had it up and running in only a couple of days. Most of that time was spent reading. I disagre

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Mark Hahn
then one might wonder, could VMWare running on the head make use of nodes for some workstation applications; e.g. run an application on a node while the head CPU does mostly GUI? I dunno, I've never used VMware (or kvm etc) you don't need vmware for that: run X on the head node and X clients. or

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Mark Kosmowski wrote: Robert G. Brown wrote: Rsh "and" anything else is difficulty squared, and kerberos isn't the universally implemented tool it was a decade ago, largely superceded by ssh and/or ssl connections. So finding experts to help you make it work if you're

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread John Hearns
On Fri, 2008-02-15 at 16:38 -0500, Mark Kosmowski wrote: > > I don't think there's anything difficult about setting up rsh, > ssh or > kerberos for anyone who know how to read a manual. A newbie > shouldn't be > setting up a cluster in the first pla

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Prentice Bisbal
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Mark Kosmowski wrote: > > > Robert G. Brown wrote: > > Rsh "and" anything else is difficulty squared, > > and kerberos isn't the universally implemented tool it was a > decade ago, > > largely superceded by ssh and/or ssl conne

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread Geoff Jacobs
Mark Hahn wrote: >> large compute [for one realm or another]. They're probably tired of >> being >> underbid on machines from cluster manufacturers. Their answer is, of >> course, the ICE product. Acquiring LNXI technology [specifically in >> software] helps SGI to augment this. > > I don't kno

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Mark Kosmowski
> > > > Robert G. Brown wrote: > > Rsh "and" anything else is difficulty squared, > > and kerberos isn't the universally implemented tool it was a decade ago, > > largely superceded by ssh and/or ssl connections. So finding experts to > > help you make it work if you're a newbie isn't going to be

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Mark Hahn
But there are places where cracking has a much higher up-front cost, or a higher risk. So I don't argue that this recipe is right for all. I'd argue that your approach is limited to fairly small sites. that is, a large site (I'm mainly thinking of number and diversity of users) needs to be hard

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Geoff Jacobs
Joe Landman wrote: > > > Mark Hahn wrote: >>> whats everyones take on centos as a cluster os. >> >> works fine for me, but I also don't think distros are very important. >> the critical things are: >> >> - must have a decent package system. yum is; I'm not familiar enough >> with urpmi o

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread Mark Hahn
large compute [for one realm or another]. They're probably tired of being underbid on machines from cluster manufacturers. Their answer is, of course, the ICE product. Acquiring LNXI technology [specifically in software] helps SGI to augment this. I don't know much about LNXI's technology, bu

Re: [Beowulf] yum

2008-02-15 Thread Orion Poplawski
Joshua Baker-LePain wrote: On Fri, 15 Feb 2008 at 10:52am, Joe Landman wrote Mark Hahn wrote: whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Peter St. John
Actually, I'd thought about this myself some: suppose I have a small cluster, and a head node that I also use as a workstation (so I'd think of the compute nodes as devices serving on my workstation, not of the headnode as dedicated to fileserving as you'd have at the departmental level). So then o

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joshua Baker-LePain
On Fri, 15 Feb 2008 at 11:07am, Joe Landman wrote Joshua Baker-LePain wrote: Yum is good, so is apt. I still have a problem with yum wanting to install i386 binaries as well as the x86_64 ones. Haven't learned how to stop that yet (probably simple too). It is: yum install gsl.x86_64 I

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread John Leidel
SGI is not actually picking up the support contracts from their federal contracts. It would be up to the customer to purchase [extend] the contracts to SGI. I certainly agree with Joe. This is most certainly an acquisition of assets, not a merger. SGI has traditionally been a house of large com

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Gerry Creager
Peter St. John wrote: > There. Now it's three out of three;-) rgb < I prefer tcsh. Peter I no longer have a preference. I write the shell script in whatever I happened to invoke at the top. EXCEPT on our IM p575/AiX system where our system admins claim nothing but ksh can be use

[Beowulf] Re: Setting up a new Beowulf cluster

2008-02-15 Thread Mark Kosmowski
Regarding this thread going off-topic - I was amused by RGB's static anecdote during a rather busy day at work, so am thankful it was shared. To add my own on-topic contribution, I do solid-state chemistry calculations and ran into the 32-bit memory limitations of Linux early on. This led me to a

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Prentice Bisbal
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Robert G. Brown wrote: > Rsh "and" anything else is difficulty squared, > and kerberos isn't the universally implemented tool it was a decade ago, > largely superceded by ssh and/or ssl connections. So finding experts to > help you make it work if yo

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Tod Hagan
On Fri, 2008-02-15 at 16:35 +0100, Alan Louis Scheinine wrote: > I use Centos. For years and years I have compiled > from source Gnu Scientific Library and many, many > other software packages. I write notes while doing > the compiling from scratch so the next compilation > of the same package is

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread Prentice Bisbal
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Meant to send this to the list, not just Robert: Robert Latham wrote: > http://www.prnewswire.com/cgi-bin/stories.pl?ACCT=104&STORY=/www/story/02-14-2008/0004756539&EDATE= > > For SGI's sake I hope this works out better than the Cray purchase. > > =

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Vernard Martin
Frederico Aquino Carneiro wrote: Hi! I am new in clustering, and I want to begin with the Beowulf Cluster, but I have one doubt: vmware enjoy the performance of the cluster? I mean, using the Beowulf cluster i will have a better perfomance with the vmware?? Will vmware work faster and better? t

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Peter St. John wrote: There. Now it's three out of three;-) rgb < I prefer tcsh. rgb Peter -- Robert G. BrownPhone(cell): 1-919-280-8443 Duke University Physics Dept, Box 90305 Durham, N.C. 27708-0305 Web: http://www.phy.duke.edu

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Joe Landman wrote: Anyone using their cluster for TeX? I used it to write a thesis. A distributed make environment (yeah, I built my thesis with a make file), would have helped ... Ooo, Joe, your age is showing. I compile my BOOKS in latex interactively from inside jov

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Peter St. John
> There. Now it's three out of three;-) rgb < I prefer tcsh. Peter ___ Beowulf mailing list, Beowulf@beowulf.org To change your subscription (digest mode or unsubscribe) visit http://www.beowulf.org/mailman/listinfo/beowulf

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joe Landman
Robert G. Brown wrote: As few things as possible installed. Keep it simple. Fewer things means less of an attack surface, a smaller management base, and hopefully smaller emergent complexity. A, but then you don't have any fun! And this last exploit merely er ... ah ... we must hav

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Joe Landman wrote: Mark Hahn wrote: whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm not familiar enough with urpmi o

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Alan Louis Scheinine wrote: Personally I cannot imagine using software applications as found in any distribution. For any user request, I compile from scratch from the software WWW site. Doesn't everybody do this? Definitely not. I almost never compile from scratch. The

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Mark Hahn wrote: But if you have users who always want to use the latest and greatest tools (gcc, gsl, etc), then you may want to lean towards Fedora. or compile them yourself. if you really care about them, you probably want to anyway. significant updates don't happen _

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Bill Broadley
Frederico Aquino Carneiro wrote: Hi! I am new in clustering, and I want to begin with the Beowulf Cluster, but I have one doubt: vmware enjoy the performance of the cluster? I mean, using the Beowulf cluster i will have a better perfomance with the vmware?? Will vmware work faster and better? B

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Tim Cutts
On 15 Feb 2008, at 5:45 pm, Joe Landman wrote: Ok, will have to learn aptitude. I can't stand its tui. I didn't like it much to start with, I can sympathise. There are still things about it I hate, but mainly only in its full screen guise. The CLI functions are pretty much the same as

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joe Landman
Tim Cutts wrote: rpm -qa : lists all installed packages, right? yes dpkg -l oo (nice!) works at the dpkg level, aptitude can do the same thing: aptitude search '~i' ok (I don't like the aptitude "tui"). I wind up using synaptic over X which means installing lots more junk

Re: noise Re: [Beowulf] Re: Setting up a new Beowulf cluster

2008-02-15 Thread Peter St. John
Prentice, Yes that strayed off topic (somewhat) but since it was some extraordinarily good prose I have to defend it. Lux's exposition was like a short-course; I can hardly drive a nail straight, myself, and I disbelieve in any object smaller than a billiard ball: but having read that, I feel like

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Tim Cutts
On 15 Feb 2008, at 3:52 pm, Joe Landman wrote: Mark Hahn wrote: whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm not familiar enough with

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Mark Hahn
It is: yum install gsl.x86_64 also, setting exactarch=1, right? ___ Beowulf mailing list, Beowulf@beowulf.org To change your subscription (digest mode or unsubscribe) visit http://www.beowulf.org/mailman/listinfo/beowulf

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joshua Baker-LePain
On Fri, 15 Feb 2008 at 9:43am, Robert G. Brown wrote The one other issue that can come up is hardware related -- obviously if Centos installs on your hardware it installs and you're done. IF however you add new nodes every year, and those nodes have different motherboards or network devices or

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joe Landman
Joshua Baker-LePain wrote: Yum is good, so is apt. I still have a problem with yum wanting to install i386 binaries as well as the x86_64 ones. Haven't learned how to stop that yet (probably simple too). It is: yum install gsl.x86_64 I meant automatically picking up updates, or on new i

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joshua Baker-LePain
On Fri, 15 Feb 2008 at 10:52am, Joe Landman wrote Mark Hahn wrote: whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm not familiar enough with

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joe Landman
Mark Hahn wrote: whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm not familiar enough with urpmi or apt to know them. I think both provide

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Robert G. Brown
On Fri, 15 Feb 2008, Leif Nixon wrote: "Robert G. Brown" <[EMAIL PROTECTED]> writes: For example, who actually shuts down their entire network when the word comes in that e.g. the linux kernel has an exploit that allows any user to root at will? We actually touched /etc/nologin on Monday mor

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Mark Hahn
But if you have users who always want to use the latest and greatest tools (gcc, gsl, etc), then you may want to lean towards Fedora. or compile them yourself. if you really care about them, you probably want to anyway. significant updates don't happen _that_ frequently, though this is obvious

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Alan Louis Scheinine
I use Centos. For years and years I have compiled from source Gnu Scientific Library and many, many other software packages. I write notes while doing the compiling from scratch so the next compilation of the same package is rapid. I also compile gcc (g++, etc.) from scratch. The result is tha

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Leif Nixon
"Robert G. Brown" <[EMAIL PROTECTED]> writes: > For example, who actually shuts down their entire network when the word > comes in that e.g. the linux kernel has an exploit that allows any user > to root at will? We actually touched /etc/nologin on Monday morning. -- Leif Nixon

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread Mark Hahn
http://www.prnewswire.com/cgi-bin/stories.pl?ACCT=104&STORY=/www/story/02-14-2008/0004756539&EDATE= For SGI's sake I hope this works out better than the Cray purchase. could this be driven entirely by Linux Networx holding some large contracts with gov labs? I've never seen anything from LN t

Re: [Beowulf] vmware perfomance

2008-02-15 Thread Mark Hahn
Hi! I am new in clustering, and I want to begin with the Beowulf Cluster, but I have one doubt: vmware enjoy the performance of the cluster? I mean, using the Beowulf cluster i will have a better perfomance with the vmware?? Will vmware work faster and better? certainly not. _nothing_ works bet

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Mark Hahn
whats everyones take on centos as a cluster os. works fine for me, but I also don't think distros are very important. the critical things are: - must have a decent package system. yum is; I'm not familiar enough with urpmi or apt to know them. I think both provide appropriate

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Robert G. Brown
On Tue, 12 Feb 2008, Jon Aquilina wrote: whats everyones take on centos as a cluster os. It's fine, especially right after it is released. It is supported for long enough to last the lifetime of a cluster, which is good -- set up your repo mirror, set up yum, and everything just auto-updates.

Re: [Beowulf] sgi and linux networks

2008-02-15 Thread Joe Landman
Robert Latham wrote: http://www.prnewswire.com/cgi-bin/stories.pl?ACCT=104&STORY=/www/story/02-14-2008/0004756539&EDATE= For SGI's sake I hope this works out better than the Cray purchase. I remember driving in to work (at SGI) the morning it was announced. My first reaction was "why"?

Re: [Beowulf] centos5 as cluster os

2008-02-15 Thread Joshua Baker-LePain
On Tue, 12 Feb 2008 at 2:48pm, Jon Aquilina wrote whats everyones take on centos as a cluster os. It depends on your needs. If you use a lot of commercial software, CentOS can be great as commercial software tends to like RHEL more than Fedora. If you're using in-house code and don't always

[Beowulf] sgi and linux networks

2008-02-15 Thread Robert Latham
http://www.prnewswire.com/cgi-bin/stories.pl?ACCT=104&STORY=/www/story/02-14-2008/0004756539&EDATE= For SGI's sake I hope this works out better than the Cray purchase. ==rob -- Rob Latham Mathematics and Computer Science DivisionA215 0178 EA2D B059 8CDF Argonne National Lab, IL USA

Re: [Beowulf] High Performance SSH/SCP

2008-02-15 Thread Robert G. Brown
On Thu, 14 Feb 2008, Tim Cutts wrote: their password is sane. It's a similar scenario. The authors' high and mighty principles don't actually necessarily make my systems any more secure at all, quite possibly the reverse. Quite apart from the extra workload it puts on me. The average scien

Re: [Beowulf] getting kubuntu to perform as a cluster os

2008-02-15 Thread Ellis Wilson
Geoff Jacobs wrote: > Jon Aquilina wrote: > >> i would use the server but im not extremely versed with command line >> commands except the simple sudo apt-get install update upgrade >> dist-upgrade auto clean, etc >> > > Hmm... I would suspect some command line is going to be required no >