[R-pkg-devel] NOTE from checking for detritus in the temp directory
Dear All, I got a NOTE from CRAN: ** checking for detritus in the temp directory ... NOTEFound the following files/directories: ‘calibre_4.99.6_tmp_lezpx205’ ‘calibre_4.99.6_tmp_mzjswhrh’ ‘calibre_4.99.6_tmp_zc8txrmi’ ‘calibre_4.99.6_tmp_zw0pp8wj’* DONEStatus: 1 NOTE* Here is the log file for the CRAN check. (At the bottom, you can find the above NOTE.) https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200702_112950/Debian/00check.log When I checked my package, there was no detritus in the temp dir. I tested my package using the command below: > rhub::platforms() > rhub::check_for_cran(platforms = "debian-clang-devel") > rhub::check_for_cran(platforms = "debian-gcc-devel" ) > rhub::check_for_cran(platforms = "debian-gcc-devel-nold" ) > rhub::check_for_cran(platforms = "debian-gcc-patched" ) > rhub::check_for_cran(platforms = "debian-gcc-release" ) As shown below, it says "OK" https://artifacts.r-hub.io/rQCC_1.20.7.tar.gz-66c588542824483db19cdc9130c715c4/ Please help me if you know how to fix the detritus issue in the temp dir. Thanks, CP [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] NOTE from checking for detritus in the temp directory
Thanks Gábor, I removed all the URLs in the *.Rd files and resubmitted to CRAN. I got the same NOTE again as below: After removing the URLs in the *.Rd : https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200704_161730/Debian/00check.log Just in case, the below is the NOTE before removing the ULRs in the Rd: https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200702_112950/Debian/00check.log I have this trouble after adding vignettes. So my guess is that this NOTE may be from vignette. I checked the package using rhub::check_for_cran with all the platforms. They do not have this kind of issue. Only CRAN produces this NOTE. My vignette is written in *.Rnw (essentially the same as LaTeX format). When the vignette file is compiled, some aux files are generated. So, I think that CRAN may not delete aux files properly. Thanks, CP On Sat, Jul 4, 2020 at 9:48 PM Gábor Csárdi wrote: > Most likely this is because you start a web browser in your examples > or tests. Try to find where that happens, and don't run it that > example or test case on CRAN. > > Gabor > > On Sat, Jul 4, 2020 at 1:46 PM Applied Statistics Laboratory > wrote: > > > > Dear All, > > > > I got a NOTE from CRAN: > > > > > > > > > > > > > > > > ** checking for detritus in the temp directory ... NOTEFound the > following > > files/directories: ‘calibre_4.99.6_tmp_lezpx205’ > > ‘calibre_4.99.6_tmp_mzjswhrh’ ‘calibre_4.99.6_tmp_zc8txrmi’ > > ‘calibre_4.99.6_tmp_zw0pp8wj’* DONEStatus: 1 NOTE* > > Here is the log file for the CRAN check. (At the bottom, you can find the > > above NOTE.) > > > > > https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200702_112950/Debian/00check.log > > > > > > > > When I checked my package, there was no detritus in the temp dir. I > tested > > my package using the command below: > > > > > rhub::platforms() > > > rhub::check_for_cran(platforms = "debian-clang-devel") > > > rhub::check_for_cran(platforms = "debian-gcc-devel" ) > > > rhub::check_for_cran(platforms = "debian-gcc-devel-nold" ) > > > rhub::check_for_cran(platforms = "debian-gcc-patched" ) > > > rhub::check_for_cran(platforms = "debian-gcc-release" ) > > > > As shown below, it says "OK" > > > > > https://artifacts.r-hub.io/rQCC_1.20.7.tar.gz-66c588542824483db19cdc9130c715c4/ > > > > Please help me if you know how to fix the detritus issue in the temp dir. > > > > Thanks, > > CP > > > > [[alternative HTML version deleted]] > > > > __ > > R-package-devel@r-project.org mailing list > > https://stat.ethz.ch/mailman/listinfo/r-package-devel > -- Applied Statistics Laboratory https://sites.google.com/view/appliedstatlab [[alternative HTML version deleted]] __ R-package-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-package-devel
Re: [R-pkg-devel] NOTE from checking for detritus in the temp directory
Dear Gábor,
Thanks so much for your suggestions. Now my problems are solved.
Best wishes,
CP
On Sun, Jul 5, 2020 at 9:52 AM Gábor Csárdi wrote:
> URLs are fine, the problem is with opening external programs like a
> web browser or a PDF viewer. I think you do that here:
>
>
> https://github.com/AppliedStat/R/blob/8e4173da8917caf0f4f68d4056902075fb9013c2/rQCC/man/factors.cc.Rd#L118
>
> https://github.com/AppliedStat/R/blob/8e4173da8917caf0f4f68d4056902075fb9013c2/rQCC/man/rcc.Rd#L297
>
> Maybe at other places as well.
>
> If you want to open the vignette from the example, maybe you can try
> something like
>
> if (interactive()) vignette("factors.cc", package="rQCC")
>
> so it does not run in R CMD check.
>
> Gabor
>
> On Sun, Jul 5, 2020 at 12:51 AM Applied Statistics Laboratory
> wrote:
> >
> > Thanks Gábor,
> >
> > I removed all the URLs in the *.Rd files and resubmitted to CRAN.
> >
> > I got the same NOTE again as below:
> >
> > After removing the URLs in the *.Rd :
> >
> https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200704_161730/Debian/00check.log
> >
> > Just in case, the below is the NOTE before removing the ULRs in the Rd:
> >
> https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200702_112950/Debian/00check.log
> >
> > I have this trouble after adding vignettes.
> > So my guess is that this NOTE may be from vignette.
> > I checked the package using rhub::check_for_cran with all the
> platforms. They do not have this kind of issue.
> > Only CRAN produces this NOTE. My vignette is written in *.Rnw
> (essentially the same as LaTeX format).
> > When the vignette file is compiled, some aux files are generated. So, I
> think that CRAN may not delete aux files properly.
> >
> > Thanks,
> > CP
> >
> >
> >
> > On Sat, Jul 4, 2020 at 9:48 PM Gábor Csárdi
> wrote:
> >>
> >> Most likely this is because you start a web browser in your examples
> >> or tests. Try to find where that happens, and don't run it that
> >> example or test case on CRAN.
> >>
> >> Gabor
> >>
> >> On Sat, Jul 4, 2020 at 1:46 PM Applied Statistics Laboratory
> >> wrote:
> >> >
> >> > Dear All,
> >> >
> >> > I got a NOTE from CRAN:
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> >
> >> > ** checking for detritus in the temp directory ... NOTEFound the
> following
> >> > files/directories: ‘calibre_4.99.6_tmp_lezpx205’
> >> > ‘calibre_4.99.6_tmp_mzjswhrh’ ‘calibre_4.99.6_tmp_zc8txrmi’
> >> > ‘calibre_4.99.6_tmp_zw0pp8wj’* DONEStatus: 1 NOTE*
> >> > Here is the log file for the CRAN check. (At the bottom, you can find
> the
> >> > above NOTE.)
> >> >
> >> >
> https://win-builder.r-project.org/incoming_pretest/rQCC_1.20.7_20200702_112950/Debian/00check.log
> >> >
> >> >
> >> >
> >> > When I checked my package, there was no detritus in the temp dir. I
> tested
> >> > my package using the command below:
> >> >
> >> > > rhub::platforms()
> >> > > rhub::check_for_cran(platforms = "debian-clang-devel")
> >> > > rhub::check_for_cran(platforms = "debian-gcc-devel" )
> >> > > rhub::check_for_cran(platforms = "debian-gcc-devel-nold" )
> >> > > rhub::check_for_cran(platforms = "debian-gcc-patched" )
> >> > > rhub::check_for_cran(platforms = "debian-gcc-release" )
> >> >
> >> > As shown below, it says "OK"
> >> >
> >> >
> https://artifacts.r-hub.io/rQCC_1.20.7.tar.gz-66c588542824483db19cdc9130c715c4/
> >> >
> >> > Please help me if you know how to fix the detritus issue in the temp
> dir.
> >> >
> >> > Thanks,
> >> > CP
> >> >
> >> > [[alternative HTML version deleted]]
> >> >
> >> > __
> >> > R-package-devel@r-project.org mailing list
> >> > https://stat.ethz.ch/mailman/listinfo/r-package-devel
> >
> >
> >
> > --
> > Applied Statistics Laboratory
> >
> > https://sites.google.com/view/appliedstatlab
>
[[alternative HTML version deleted]]
__
R-package-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-package-devel
