[R-pkg-devel] How to handle deprecated package dependency? 2 suggestions 1 question

2018-06-25 Thread Vincent van Hees
Dear all,

One of my package dependencies was taken from CRAN a month ago, with
the CRAN message: "...check problems were not corrected despite
reminders" as displayed on the deprecated CRAN package page. I
immediately got in touch with the deprecated package maintainer and
learnt that he is trying to resolve the issue(s).

My suggestions/questions:

1 - Would it be an idea for CRAN to inform reverse dependency package
maintainers when a package is at risk of being taken from CRAN? For
example, by cc-ing them in the warning message? I think such a
heads-up could have helped to prevent the situation.

2 - At the moment the CRAN page for the deprecated package does not
tell me what I can do to help fix the issue:

"Package ‘GENEAread’ was removed from the CRAN repository.
Formerly available versions can be obtained from the archive.
Archived on 2018-05-25 as check problems were not corrected despite reminders".

Would it be an idea to display what those problems were to make it
easier for others, like me, to help fix the issue(s)?

3 - Can you advise on how I can help address the situation, such that
I can upload a much needed update to my own CRAN package GGIR? The
approaches I can think of are: (A) Help the deprecated package
maintainer to fix their issues, which may not be easy, (B) copy the
old code of the deprecated package and create an entirely new but
fixed CRAN package from it myself stripped to only the functionality I
need, which is not ideal of course, or (C) Kindly ask CRAN to put the
deprecated package back online for a couple of months while we look
out for a better solution?

Thanks,
Vincent

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Re: [R-pkg-devel] How to handle deprecated package dependency? 2 suggestions 1 question

2018-06-25 Thread Duncan Murdoch

On 25/06/2018 3:21 PM, Vincent van Hees wrote:

Dear all,

One of my package dependencies was taken from CRAN a month ago, with
the CRAN message: "...check problems were not corrected despite
reminders" as displayed on the deprecated CRAN package page. I
immediately got in touch with the deprecated package maintainer and
learnt that he is trying to resolve the issue(s).

My suggestions/questions:

1 - Would it be an idea for CRAN to inform reverse dependency package
maintainers when a package is at risk of being taken from CRAN? For
example, by cc-ing them in the warning message? I think such a
heads-up could have helped to prevent the situation.

2 - At the moment the CRAN page for the deprecated package does not
tell me what I can do to help fix the issue:

"Package ‘GENEAread’ was removed from the CRAN repository.
Formerly available versions can be obtained from the archive.
Archived on 2018-05-25 as check problems were not corrected despite reminders >
Would it be an idea to display what those problems were to make it
easier for others, like me, to help fix the issue(s)?


I don't know if it will remain indefinitely, but the CRAN check page for 
that package is still available, containing MacOS results:


https://cran.r-project.org/web/checks/check_results_GENEAread.html

It looks as though the required changes are quite trivial:  using 
requireNamespace instead of require() or library(), and declaring 
imports from base packages.




3 - Can you advise on how I can help address the situation, such that
I can upload a much needed update to my own CRAN package GGIR? The
approaches I can think of are: (A) Help the deprecated package
maintainer to fix their issues, which may not be easy, (B) copy the
old code of the deprecated package and create an entirely new but
fixed CRAN package from it myself stripped to only the functionality I
need, which is not ideal of course, or (C) Kindly ask CRAN to put the
deprecated package back online for a couple of months while we look
out for a better solution?


Given how easy the fixes are, I'd go with (A).

Duncan Murdoch


Thanks,
Vincent

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Re: [R-pkg-devel] How to handle deprecated package dependency? 2 suggestions 1 question

2018-06-25 Thread Mark van der Loo
Dear Vincent,

I think this is little known, but you can get the CRAN result status of any
package from R, see tools::CRAN_check_results().

Best,
Mark


Op ma 25 jun. 2018 om 22:13 schreef Duncan Murdoch :

> On 25/06/2018 3:21 PM, Vincent van Hees wrote:
> > Dear all,
> >
> > One of my package dependencies was taken from CRAN a month ago, with
> > the CRAN message: "...check problems were not corrected despite
> > reminders" as displayed on the deprecated CRAN package page. I
> > immediately got in touch with the deprecated package maintainer and
> > learnt that he is trying to resolve the issue(s).
> >
> > My suggestions/questions:
> >
> > 1 - Would it be an idea for CRAN to inform reverse dependency package
> > maintainers when a package is at risk of being taken from CRAN? For
> > example, by cc-ing them in the warning message? I think such a
> > heads-up could have helped to prevent the situation.
> >
> > 2 - At the moment the CRAN page for the deprecated package does not
> > tell me what I can do to help fix the issue:
> >
> > "Package ‘GENEAread’ was removed from the CRAN repository.
> > Formerly available versions can be obtained from the archive.
> > Archived on 2018-05-25 as check problems were not corrected despite
> reminders >
> > Would it be an idea to display what those problems were to make it
> > easier for others, like me, to help fix the issue(s)?
>
> I don't know if it will remain indefinitely, but the CRAN check page for
> that package is still available, containing MacOS results:
>
> https://cran.r-project.org/web/checks/check_results_GENEAread.html
>
> It looks as though the required changes are quite trivial:  using
> requireNamespace instead of require() or library(), and declaring
> imports from base packages.
>
> >
> > 3 - Can you advise on how I can help address the situation, such that
> > I can upload a much needed update to my own CRAN package GGIR? The
> > approaches I can think of are: (A) Help the deprecated package
> > maintainer to fix their issues, which may not be easy, (B) copy the
> > old code of the deprecated package and create an entirely new but
> > fixed CRAN package from it myself stripped to only the functionality I
> > need, which is not ideal of course, or (C) Kindly ask CRAN to put the
> > deprecated package back online for a couple of months while we look
> > out for a better solution?
>
> Given how easy the fixes are, I'd go with (A).
>
> Duncan Murdoch
> >
> > Thanks,
> > Vincent
> >
> > __
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> >
>
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>

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