date:20210520

Re: [Rd] {splines} package gone missing?

2021-05-20 Thread peter dalgaard

It is part of base R, so comes with the R sources:

Peters-MacBook-Air:R pd$ ls src/library/
Makefile.in   compiler/ grid/ splines/  tools/
Makefile.win  datasets/ methods/  stats/translations/
Recommended/  grDevices/parallel/ stats4/   utils/
base/ graphics/ profile/  tcltk/

- pd

> On 20 May 2021, at 06:02 , Randall Pruim  wrote:
> 
> 
> https://cran.r-project.org/web/packages/splines/index.html claims the the 
> {splines} package has been archived.  If I follow the link there to the 
> archives, the newest version shown is from 1999.  It seems like something has 
> gone wrong with this package.
> 
> I checked on another mirror and {splines} is missing there as well.
> 
> —rjp
> 
> __
> R-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel

-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk  Priv: pda...@gmail.com

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[Rd] R 4.1.0 is released

2021-05-20 Thread Peter Dalgaard



The build system rolled up R-4.1.0.tar.gz (codename "Camp Pontanezen") this 
morning.

This is a major update, notably containing the new native pipe operator "|>" 
and 
shorthand inline functions "\(x) x+1".

The list below details the changes in this release. 

You can get the source code from

https://cran.r-project.org/src/base/R-4/R-4.1.0.tar.gz

or wait for it to be mirrored at a CRAN site nearer to you.

Binaries for various platforms will appear in due course.


For the R Core Team,

Peter Dalgaard


These are the checksums (md5 and SHA-256) for the freshly created files, in 
case you wish
to check that they are uncorrupted:

MD5 (AUTHORS) = b9c44f9f78cab3184ad9898bebc854b4
MD5 (COPYING) = eb723b61539feef013de476e68b5c50a
MD5 (COPYING.LIB) = a6f89e2100d9b6cdffcea4f398e37343
MD5 (FAQ) = 639fbbba9998cae70ef058be42b80a52
MD5 (INSTALL) = 7893f754308ca31f1ccf62055090ad7b
MD5 (NEWS) = b02805558a8315f1a93c7f7d7cd879c1
MD5 (NEWS.0) = bfcd7c147251b5474d96848c6f57e5a8
MD5 (NEWS.1) = eb78c4d053ec9c32b815cf0c2ebea801
MD5 (NEWS.2) = a767f7809324c73c49eaff47d14bce81
MD5 (NEWS.3) = e55ed2c8a547b827b46e08eb7137ba23
MD5 (R-latest.tar.gz) = bd80f97d0e46a71408f5bc25652a0203
MD5 (README) = f468f281c919665e276a1b691decbbe6
MD5 (RESOURCES) = 529223fd3ffef95731d0a87353108435
MD5 (THANKS) = 251d20510bfc3cc93b82c5a99f7efcc6
MD5 (VERSION-INFO.dcf) = 1f3cf39735afb48fea434bca2b7bf483
MD5 (R-4/R-4.1.0.tar.gz) = bd80f97d0e46a71408f5bc25652a0203

2cde824a7b18958e5f06b391c801c8288be0f84fa8934b7ddefef23c67e60c09  AUTHORS
e6d6a009505e345fe949e1310334fcb0747f28dae2856759de102ab66b722cb4  COPYING
6095e9ffa777dd22839f7801aa845b31c9ed07f3d6bf8a26dc5d2dec8ccc0ef3  COPYING.LIB
0dce85f38b9d6351a1b63f057dfbc7f572966245add12946482e57e60d41547c  FAQ
f87461be6cbaecc4dce44ac58e5bd52364b0491ccdadaf846cb9b452e9550f31  INSTALL
20e7185fb5af0f2ac825b27c16afd57ff206726117c6ac5cf7c6f230337af093  NEWS
4e21b62f515b749f80997063fceab626d7258c7d650e81a662ba8e0640f12f62  NEWS.0
12b30c724117b1b2b11484673906a6dcd48a361f69fc420b36194f9218692d01  NEWS.1
ba74618bc3f4c0e336dca13d472402a1863d12ba6f7f91a1782bc469ee986f6d  NEWS.2
1910a2405300b9bc7c76beeb0753a5249cf799afe175ce28f8d782fab723e012  NEWS.3
e8e68959d7282ca147360fc9644ada9bd161bab781bab14d33b8999a95182781  
R-latest.tar.gz
2fdd3e90f23f32692d4b3a0c0452f2c219a10882033d1774f8cadf25886c3ddc  README
408737572ecc6e1135fdb2cf7a9dbb1a6cb27967c757f1771b8c39d1fd2f1ab9  RESOURCES
c9c7cb32308b4e560a22c858819ade9de524a602abd4e92d1c328c89f8037d73  THANKS
2f834a058dcfcdfb7eedf45aa0d897ea1a7c43a9460ffd22f73b60919cb1bf57  
VERSION-INFO.dcf
e8e68959d7282ca147360fc9644ada9bd161bab781bab14d33b8999a95182781  
R-4/R-4.1.0.tar.gz

This is the relevant part of the NEWS file

CHANGES IN R 4.1.0:

  FUTURE DIRECTIONS:

* It is planned that the 4.1.x series will be the last to support
  32-bit Windows, with production of binary packages for that
  series continuing until early 2023.

  SIGNIFICANT USER-VISIBLE CHANGES:

* Data set esoph in package datasets now provides the correct
  numbers of controls; previously it had the numbers of cases added
  to these.  (Reported by Alexander Fowler in PR#17964.)

  NEW FEATURES:

* www.omegahat.net is no longer one of the repositories known by
  default to setRepositories().  (Nowadays it only provides source
  packages and is often unavailable.)

* Function package_dependencies() (in package tools) can now use
  different dependency types for direct and recursive dependencies.

* The checking of the size of tarball in R CMD check --as-cran
   may be tweaked via the new environment variable
  _R_CHECK_CRAN_INCOMING_TARBALL_THRESHOLD_, as suggested in
  PR#1 by Jan Gorecki.

* Using c() to combine a factor with other factors now gives a
  factor, an ordered factor when combining ordered factors with
  identical levels.

* apply() gains a simplify argument to allow disabling of
  simplification of results.

* The format() method for class "ftable" gets a new option justify.
  (Suggested by Thomas Soeiro.)

* New ...names() utility.  (Proposed by Neal Fultz in PR#17705.)

* type.convert() now warns when its as.is argument is not
  specified, as the help file always said it _should_.  In that
  case, the default is changed to TRUE in line with its change in
  read.table() (related to stringsAsFactor) in R 4.0.0.

* When printing list arrays, classed objects are now shown _via_
  their format() value if this is a short enough character string,
  or by giving the first elements of their class vector and their
  length.

* capabilities() gets new entry "Rprof" which is TRUE when R has
  been configured with the equivalent of --enable-R-profiling (as
  it is by default).  (Related to Michael Orlitzky's report
  PR#17836.)

* str(xS4) now also shows extraneous attributes of an S4 object
  xS4.

* Rudimentary support for vi-style tags in rtags()

Re: [Rd] {splines} package gone missing?

2021-05-20 Thread Randall Pruim

Thanks.  I actually sort of checked for this:


row.names(installed.packages(priority = "base"))
 [1] "base"  "compiler"  "datasets"  "graphics"  "grDevices" "grid"  
"methods"   "parallel"  "stats" "stats4""tcltk"
[12] "tools" "utils"

But, of course, if the package is missing on my system (a newly installed 4.1 
on an RStudio server), then it won’t be listed here.

I’ll have to figure out what went wrong with the install.  I’ll probably start 
by having our sysadmin simply reinstall R 4.1 and hope that that takes care of 
the problem.

Looks like profile is missing as well.

—rjp

On May 20, 2021, at 3:14 AM, peter dalgaard 
mailto:pda...@gmail.com>> wrote:

It is part of base R, so comes with the R sources:

Peters-MacBook-Air:R pd$ ls src/library/
Makefile.in   compiler/ grid/ splines/  tools/
Makefile.win  datasets/ methods/  stats/
translations/
Recommended/  grDevices/parallel/ stats4/   utils/
base/ graphics/ profile/  tcltk/

- pd

On 20 May 2021, at 06:02 , Randall Pruim 
mailto:rpr...@calvin.edu>> wrote:


https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_web_packages_splines_index.html&d=DwIFaQ&c=4rZ6NPIETe-LE5i2KBR4rw&r=S6U-baLhvGcJ7iUQX_KZ6K2om1TTOeUI_-mjRpTrm00&m=GW4Zim0TvggrmjKt0HtW7il0NwJJaworM4-LL3H2FyI&s=69EYlZJd6di726T20ILKnX7f4GWM-VaUplRjNXfGolQ&e=
  claims the the {splines} package has been archived.  If I follow the link 
there to the archives, the newest version shown is from 1999.  It seems like 
something has gone wrong with this package.

I checked on another mirror and {splines} is missing there as well.

—rjp

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--
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk  Priv: 
pda...@gmail.com



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Re: [Rd] {splines} package gone missing?

2021-05-20 Thread Ben Bolker

splines is 'recommended' ( not sure about capitalization), not "base'

On Thu, May 20, 2021, 7:02 AM Randall Pruim  wrote:

> Thanks.  I actually sort of checked for this:
>
>
> row.names(installed.packages(priority = "base"))
>  [1] "base"  "compiler"  "datasets"  "graphics"  "grDevices" "grid"
>   "methods"   "parallel"  "stats" "stats4""tcltk"
> [12] "tools" "utils"
>
> But, of course, if the package is missing on my system (a newly installed
> 4.1 on an RStudio server), then it won’t be listed here.
>
> I’ll have to figure out what went wrong with the install.  I’ll probably
> start by having our sysadmin simply reinstall R 4.1 and hope that that
> takes care of the problem.
>
> Looks like profile is missing as well.
>
> —rjp
>
> On May 20, 2021, at 3:14 AM, peter dalgaard  pda...@gmail.com>> wrote:
>
> It is part of base R, so comes with the R sources:
>
> Peters-MacBook-Air:R pd$ ls src/library/
> Makefile.in   compiler/ grid/ splines/  tools/
> Makefile.win  datasets/ methods/  stats/
> translations/
> Recommended/  grDevices/parallel/ stats4/   utils/
> base/ graphics/ profile/  tcltk/
>
> - pd
>
> On 20 May 2021, at 06:02 , Randall Pruim  rpr...@calvin.edu>> wrote:
>
>
>
> https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_web_packages_splines_index.html&d=DwIFaQ&c=4rZ6NPIETe-LE5i2KBR4rw&r=S6U-baLhvGcJ7iUQX_KZ6K2om1TTOeUI_-mjRpTrm00&m=GW4Zim0TvggrmjKt0HtW7il0NwJJaworM4-LL3H2FyI&s=69EYlZJd6di726T20ILKnX7f4GWM-VaUplRjNXfGolQ&e=
> claims the the {splines} package has been archived.  If I follow the link
> there to the archives, the newest version shown is from 1999.  It seems
> like something has gone wrong with this package.
>
> I checked on another mirror and {splines} is missing there as well.
>
> —rjp
>
> __
> R-devel@r-project.org mailing list
>
> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Ddevel&d=DwIFaQ&c=4rZ6NPIETe-LE5i2KBR4rw&r=S6U-baLhvGcJ7iUQX_KZ6K2om1TTOeUI_-mjRpTrm00&m=GW4Zim0TvggrmjKt0HtW7il0NwJJaworM4-LL3H2FyI&s=Jen0Ht23Vg-znRGxp8YPRc-qCbG0uLYGAyyECxU6kFg&e=
>
> --
> Peter Dalgaard, Professor,
> Center for Statistics, Copenhagen Business School
> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
> Phone: (+45)38153501
> Office: A 4.23
> Email: pd@cbs.dk  Priv: pda...@gmail.com pda...@gmail.com>
>
>
>
> [[alternative HTML version deleted]]
>
> __
> R-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>

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Re: [Rd] {splines} package gone missing?

2021-05-20 Thread peter dalgaard

No, it really is base R, not Recommended:

Peters-MacBook-Air:BUILD pd$ ls ../R/src/library/Recommended/
KernSmooth.tgz  foreign.tgz
KernSmooth_2.23-20.tar.gz   foreign_0.8-81.tar.gz
MASS.tgzlattice.tgz
MASS_7.3-54.tar.gz  lattice_0.20-44.tar.gz
Makefile.in mgcv.tgz
Makefile.winmgcv_1.8-35.tar.gz
Matrix.tgz  nlme.tgz
Matrix_1.3-3.tar.gz nlme_3.1-152.tar.gz
boot.tgznnet.tgz
boot_1.3-28.tar.gz  nnet_7.3-16.tar.gz
class.tgz   rpart.tgz
class_7.3-19.tar.gz rpart_4.1-15.tar.gz
cluster.tgz spatial.tgz
cluster_2.1.2.tar.gzspatial_7.3-14.tar.gz
codetools.tgz   survival.tgz
codetools_0.2-18.tar.gz survival_3.2-11.tar.gz
Peters-MacBook-Air:BUILD pd$ ls ../R/src/library/
Makefile.in compilergridsplines tools
Makefile.windatasetsmethods stats   translations
Recommended grDevices   parallelstats4  utils
basegraphicsprofile tcltk
> row.names(installed.packages(priority = "base")) 
 [1] "base"  "compiler"  "datasets"  "graphics"  "grDevices" "grid" 
 [7] "methods"   "parallel"  "splines"   "stats" "stats4""tcltk"
[13] "tools" "utils"

'profile' is not an actual package, though.

- Peter


> On 20 May 2021, at 13:12 , Ben Bolker  wrote:
> 
> splines is 'recommended' ( not sure about capitalization), not "base'
> 
> On Thu, May 20, 2021, 7:02 AM Randall Pruim  wrote:
> Thanks.  I actually sort of checked for this:
> 
> 
> row.names(installed.packages(priority = "base"))
>  [1] "base"  "compiler"  "datasets"  "graphics"  "grDevices" "grid"  
> "methods"   "parallel"  "stats" "stats4""tcltk"
> [12] "tools" "utils"
> 
> But, of course, if the package is missing on my system (a newly installed 4.1 
> on an RStudio server), then it won’t be listed here.
> 
> I’ll have to figure out what went wrong with the install.  I’ll probably 
> start by having our sysadmin simply reinstall R 4.1 and hope that that takes 
> care of the problem.
> 
> Looks like profile is missing as well.
> 
> —rjp
> 
> On May 20, 2021, at 3:14 AM, peter dalgaard 
> mailto:pda...@gmail.com>> wrote:
> 
> It is part of base R, so comes with the R sources:
> 
> Peters-MacBook-Air:R pd$ ls src/library/
> Makefile.in   compiler/ grid/ splines/  tools/
> Makefile.win  datasets/ methods/  stats/
> translations/
> Recommended/  grDevices/parallel/ stats4/   utils/
> base/ graphics/ profile/  tcltk/
> 
> - pd
> 
> On 20 May 2021, at 06:02 , Randall Pruim 
> mailto:rpr...@calvin.edu>> wrote:
> 
> 
> https://urldefense.proofpoint.com/v2/url?u=https-3A__cran.r-2Dproject.org_web_packages_splines_index.html&d=DwIFaQ&c=4rZ6NPIETe-LE5i2KBR4rw&r=S6U-baLhvGcJ7iUQX_KZ6K2om1TTOeUI_-mjRpTrm00&m=GW4Zim0TvggrmjKt0HtW7il0NwJJaworM4-LL3H2FyI&s=69EYlZJd6di726T20ILKnX7f4GWM-VaUplRjNXfGolQ&e=
>   claims the the {splines} package has been archived.  If I follow the link 
> there to the archives, the newest version shown is from 1999.  It seems like 
> something has gone wrong with this package.
> 
> I checked on another mirror and {splines} is missing there as well.
> 
> —rjp
> 
> __
> R-devel@r-project.org mailing list
> https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_r-2Ddevel&d=DwIFaQ&c=4rZ6NPIETe-LE5i2KBR4rw&r=S6U-baLhvGcJ7iUQX_KZ6K2om1TTOeUI_-mjRpTrm00&m=GW4Zim0TvggrmjKt0HtW7il0NwJJaworM4-LL3H2FyI&s=Jen0Ht23Vg-znRGxp8YPRc-qCbG0uLYGAyyECxU6kFg&e=
> 
> --
> Peter Dalgaard, Professor,
> Center for Statistics, Copenhagen Business School
> Solbjerg Plads 3, 2000 Frederiksberg, Denmark
> Phone: (+45)38153501
> Office: A 4.23
> Email: pd@cbs.dk  Priv: 
> pda...@gmail.com
> 
> 
> 
> [[alternative HTML version deleted]]
> 
> __
> R-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel

-- 
Peter Dalgaard, Professor,
Center for Statistics, Copenhagen Business School
Solbjerg Plads 3, 2000 Frederiksberg, Denmark
Phone: (+45)38153501
Office: A 4.23
Email: pd@cbs.dk  Priv: pda...@gmail.com

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Re: [Rd] {splines} package gone missing?

[Rd] R 4.1.0 is released

Re: [Rd] {splines} package gone missing?

Re: [Rd] {splines} package gone missing?

Re: [Rd] {splines} package gone missing?

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