[Rd] how to make a true binary package?

2011-10-11 Thread A Zege

I'd like to have a version of a package that doesn't include sources. I
thought that this could be achieved by using binary option in R CMD build,
but in fact it packages source code that could be easily printed once the
library is loaded. Is there an option to avoid visibility of the source? 

Another related question is how to install two versions of the same package,
so that i could load either of them? I am sure this could be done, just
cannot find this in docs.

I am using R 2.12.1 on Red Hat Lunix 

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Re: [Rd] how to make a true binary package?

2011-10-11 Thread Uwe Ligges



On 11.10.2011 18:33, A Zege wrote:


I'd like to have a version of a package that doesn't include sources. I
thought that this could be achieved by using binary option in R CMD build,
but in fact it packages source code that could be easily printed once the
library is loaded. Is there an option to avoid visibility of the source?


R is open source software ...

Anyway, for C sources: these cannot be printed easily in a binary 
package. But then make sure your license is file given you link against 
something under GPL ...




Another related question is how to install two versions of the same package,
so that i could load either of them? I am sure this could be done, just
cannot find this in docs.


You can install each version of the package into a separate library.

Uwe Ligges







I am using R 2.12.1 on Red Hat Lunix

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Re: [Rd] how to make a true binary package?

2011-10-11 Thread Duncan Murdoch

On 11/10/2011 12:33 PM, A Zege wrote:

I'd like to have a version of a package that doesn't include sources. I
thought that this could be achieved by using binary option in R CMD build,
but in fact it packages source code that could be easily printed once the
library is loaded. Is there an option to avoid visibility of the source?


No.  As Uwe said, R is an open source project.  We like to encourage 
others to be open source too.


Duncan Murdoch


Another related question is how to install two versions of the same package,
so that i could load either of them? I am sure this could be done, just
cannot find this in docs.

I am using R 2.12.1 on Red Hat Lunix

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Re: [Rd] how to make a true binary package?

2011-10-11 Thread A Zege
OK, gentlemen, i agree with you in general. I was not talking about a general
purpose, general use package that one prepares for CRAN. I am sure you are
familiar professionally or can imagine situations where you need to
demonstrate a solution to a specific task without fully disclosing the
details -- sometimes even hard core open source adherents need to sacrifice
desire for openness for some prosaic purposes, like getting paid :).
Compilable languages give an easy solution of a binary code. It sounds like
if one wants true binary, he has to recode in C++. I thought it's possible
in R as well, i thought this was discussed even as a default behavior for
next version of R to make stuff go faster. Maybe not. Thanks, anyway.


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Re: [Rd] how to make a true binary package?

2011-10-11 Thread Simon Urbanek

On Oct 11, 2011, at 1:09 PM, A Zege wrote:

> OK, gentlemen, i agree with you in general. I was not talking about a general
> purpose, general use package that one prepares for CRAN. I am sure you are
> familiar professionally or can imagine situations where you need to
> demonstrate a solution to a specific task without fully disclosing the
> details -- sometimes even hard core open source adherents need to sacrifice
> desire for openness for some prosaic purposes, like getting paid :).

Those are fairly disjoint concepts - open source doesn't mean you can't get 
paid. Also the fact that the source is accessible doesn't mean that it is legal 
for someone else to take it - you define what you allow in the license. Note, 
for example that Java bytecode can be easily disassembled into readable Java 
source form and yet there is a lot of commercial software written in Java.


> Compilable languages give an easy solution of a binary code. It sounds like
> if one wants true binary, he has to recode in C++. I thought it's possible
> in R as well, i thought this was discussed even as a default behavior for
> next version of R to make stuff go faster. Maybe not. Thanks, anyway.
> 

You can compile the functions and strip the source code from the bytecode 
objects. Such a thing can be serialized without revealing the original source 
code. However, you can still de-compile it, and R doesn't guarantee that such 
stripped objects will continue to work, so your mileage will vary and you may 
want to check if it's what you want.

There are obvious other ways you could use that are much simpler - such as 
encrypt your sources. Nothing is completely bullet-proof, it's just a matter of 
how much work it requires to break whichever method you choose.

Cheers,
Simon

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Re: [Rd] how to make a true binary package?

2011-10-11 Thread Spencer Graves
  One of the most secure options, I think, is to provide a 
web-based tool to do the computations.  I know one case where this was 
done.  The clients probably did not even know that R was being used to 
do the computations.  They had an application or a procedure for 
uploading their data to a secure web site, which then returned answers.  
This too can be defeated by determined hackers, but if you are careful 
about your encryption, etc., you can make it quite difficult for them.



  Hope this helps.
  Spencer


On 10/11/2011 10:41 AM, Simon Urbanek wrote:

On Oct 11, 2011, at 1:09 PM, A Zege wrote:


OK, gentlemen, i agree with you in general. I was not talking about a general
purpose, general use package that one prepares for CRAN. I am sure you are
familiar professionally or can imagine situations where you need to
demonstrate a solution to a specific task without fully disclosing the
details -- sometimes even hard core open source adherents need to sacrifice
desire for openness for some prosaic purposes, like getting paid :).

Those are fairly disjoint concepts - open source doesn't mean you can't get 
paid. Also the fact that the source is accessible doesn't mean that it is legal 
for someone else to take it - you define what you allow in the license. Note, 
for example that Java bytecode can be easily disassembled into readable Java 
source form and yet there is a lot of commercial software written in Java.



Compilable languages give an easy solution of a binary code. It sounds like
if one wants true binary, he has to recode in C++. I thought it's possible
in R as well, i thought this was discussed even as a default behavior for
next version of R to make stuff go faster. Maybe not. Thanks, anyway.


You can compile the functions and strip the source code from the bytecode 
objects. Such a thing can be serialized without revealing the original source 
code. However, you can still de-compile it, and R doesn't guarantee that such 
stripped objects will continue to work, so your mileage will vary and you may 
want to check if it's what you want.

There are obvious other ways you could use that are much simpler - such as 
encrypt your sources. Nothing is completely bullet-proof, it's just a matter of 
how much work it requires to break whichever method you choose.

Cheers,
Simon

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Re: [Rd] how to make a true binary package?

2011-10-11 Thread Barry Rowlingson
On Tue, Oct 11, 2011 at 6:09 PM, A Zege  wrote:
> OK, gentlemen, i agree with you in general. I was not talking about a general
> purpose, general use package that one prepares for CRAN. I am sure you are
> familiar professionally or can imagine situations where you need to
> demonstrate a solution to a specific task without fully disclosing the
> details -- sometimes even hard core open source adherents need to sacrifice
> desire for openness for some prosaic purposes, like getting paid :).
> Compilable languages give an easy solution of a binary code. It sounds like
> if one wants true binary, he has to recode in C++. I thought it's possible
> in R as well, i thought this was discussed even as a default behavior for
> next version of R to make stuff go faster. Maybe not. Thanks, anyway.
>

 [deja vu all over again]

 What you seem to want to do is code obfuscation. With C, the
obfuscation is caused by it being turned into machine code
instructions, making exact reconstruction of the C source impossible,
but reconstruction of the code as assembly language and hence reverse
engineering very possible.

 With R, there is no compilation to machine code, so plain R source
code has to be available to the R interpreter [exception: see Simon's
talk of bytecode]. Any encryption you put on has to be decrypted by
the user in order to run it. I've said this a few times on R-help and
maybe R-devel too.

 If someone is offering to pay you, then if you tell them they can see
the source code then they should want to pay you more.

 There's also nothing to stop you putting a restrictive license on
your source code - including clauses like 'if you look at the contents
of any *.R files you are in breach of this license'. These things
might even stand up in court.

 Barry 'Not a lawyer' Rowlingson

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