Bug#540513: ITP: stxxl -- C++ Standard Template Library (STL) for extra large datasets

2009-09-06 Thread D Haley
I a have uploaded a prospective package to Debian mentors. Comments would be 
most appreciated.

http://mentors.debian.net/cgi-bin/sponsor-pkglist?action=details;package=libstxxl1


  



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Bug#540513: ITP:libstxxl

2009-10-19 Thread D Haley
I have a working package uploaded to alioth under debian-science. Upload by 
Sylvestre Ledru is currently pending.


  



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Bug#519583: (no subject)

2009-12-23 Thread D Haley
I've used this program before, so I can package it, but I will not be able to 
start on this until Feb. next year. Therefore, i am no going to ITP -- if 
anyone can do this faster, please do.


  



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Bug#519583: Proprosed package

2010-01-02 Thread D Haley
A proposal for review has been uploaded to mentors:

http://mentors.debian.net/cgi-bin/sponsor-pkglist?action=details;package=opticalraytracer


  



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Bug#570930: ITP: liblemon1 -- Library for Efficient Modeling and Optimization in Networks

2010-02-22 Thread D Haley
Package: wnpp
Severity: wishlist

* Package name: liblemon1
  Version : 1.1.1
  Upstream Author : Egervary Research Group on Combinatorial Optimization 
(EGRES)
* URL :  http://lemon.cs.elte.hu/
* License : Boost 1.0
  Programming Lang: C++
  Description : Library for Efficient Modeling and Optimization in Networks

This has recently come under the Coin-or banner. Should this be named 
coinor-liblemon1 ?


  



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Bug#570930: ITP: liblemon1 -- Library for Efficient Modeling and Optimization in Networks

2010-02-23 Thread D Haley
I have a work-in-progress git repo placed in debian-science:

git clone git://git.debian.org/git/debian-science/liblemon1


  



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Bug#564533: Deb source package

2010-03-04 Thread D Haley
Hello Paul,

Have you uploaded this to mentors or provided a DSC somewhere? I am happy to 
have a brows through it -- I maintain one package in debian currently, so I am 
no expert, but I can run my eye over it if you have a link.

Thanks.


  



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Bug#564533: Deb source package

2010-03-04 Thread D Haley
OK, so here are my comments. Feel free to ignore whatever you like, as I am 
often not right.


* Lintian is giving native package errors. If you do a quick source build with 
debuild (debuild -S -i -I), this will tell you what your tarball should be 
called, so as to aid navigating this annoying notation.

:~/Documents/deb/shedskin/shedskin-0.3$ debuild -S -i -I
This package has a Debian revision number but there does not seem to be
an appropriate original tar file or .orig directory in the parent directory;
(expected one of shedskin_0.3.orig.tar.gz, shedskin_0.3.orig.tar.bz2,
shedskin_0.3.orig.tar.lzma or shedskin-0.3.orig)
continue anyway? (y/n) n

* I got a warning whilst building source package.. Are you seeing this?

dpkg-source: warning: diff 
`~/Documents/deb/shedskin/shedskin_0.3-2.diff.gz.new.Haj083' doesn't contain 
any patch

*The permissions from the DSC are a bit odd? Everything in debian/ seems to be 
755? should it not be 644 (except rules I think)?

* Shouldn't the description be wrapped at 80 chars in debian/control, with each 
new line preceded by a space?

*In debian/copyright, there are some chars that are not showing properly: 

 75 Copyright (c) 2009 Jérémie Roquet 

* Standards version is old school. Should be 3.8.4 (or maybe even later...)

* debina/changelog seems to contain program changes, rather than package 
changes? changelog should be package only AFAIK. Any program changes should be 
hopefully distributed by upstream

* adding a watchfile is good (debian/watch)

* You may have been alluding to this before, but does the  GPL trump the AS-IS 
free stuff, as you are building them together? Particularly section 5b 

"
b) The work must carry prominent notices stating that it is
released under this License and any conditions added under section
7.  This requirement modifies the requirement in section 4 to
"keep intact all notices".
"
You may need to contact upstream and ask them to sort this out, once a correct 
course of action has been identified.

* Keeping this on a VCS somewhere would be nice, makes it easy for other 
packagers to pull down your package at some later date. This integrates neatly 
with the debian PTS. to do this just set Vcs-Git/Vcs-Svn or whatever in 
debian/control

*I get a warning whilst attempting to build the binary version.

dpkg-deb: warning: 'debian/shedskin/DEBIAN/control' contains user-defined field 
'Python-Version'

*Make clean still appears to leave files behind (build-python-*, 
debian/shedskin.1.gz, ...). I usually use a VCS to help me work out if I have 
accidently not done a proper clean (do a commit, then see what changes before 
and after clean using fakeroot make -f debian/rules clean ).

* Lintian outputs  a good wad of errors and warnings:

N: Setting up lab in /tmp/YnJLKVJw7I ...
N: Processing 2 packages...
N: 
N: Processing source package shedskin (version 0.3-2) ...
W: shedskin source: empty-debian-diff
N: 
N:The Debian diff of this non-native package appears to be completely
N:empty. This usually indicates a mistake when generating the upstream
N:tarball, or it may mean that this was intended to be a native package
N:and was built non-native by mistake.
N:
N:If the Debian packaging is maintained in conjunction with upstream, this
N:may be intentional, but it's not recommended best practice. If the
N:software is only for Debian, it should be a native package; otherwise,
N:it's better to omit the debian directory from upstream releases and add
N:it in the Debian diff. Otherwise, it can cause problems for some package
N:updates in Debian (files can't be removed from the debian directory via
N:the diff, for example).
N:
N:Severity: normal, Certainty: possible
N: 
W: shedskin source: debhelper-but-no-misc-depends shedskin
N: 
N:The source package uses debhelper, but it does not include
N:${misc:Depends} in the given binary package's debian/control entry. Any
N:debhelper command may add dependencies to ${misc:Depends} that are
N:required for the work that it does, so recommended best practice is to
N:always add ${misc:Depends} to the dependencies of each binary package if
N:debhelper is in use.
N:
N:Refer to the debhelper(7) manual page for details.
N:
N:Severity: normal, Certainty: possible
N: 
W: shedskin source: build-depends-on-python-dev-with-no-arch-any
N: 
N:The given package appears to have a Python development package
N:(python-dev, python-all-dev or pythonX.Y-dev) listed in its
N:Build-Depends or Build-Depends-Indep fields, but only "Architecture:
N:all" packages are built by this source package. Python applications and
N:modules do not usually require those dev packages, so you should
N:consider removing them in favour of python, python-all or pythonX.Y.
N:
N:If you are building a Python extension instead, you should have
N:development packages listed in Build-Depends, but nor

Bug#564422: Ping

2010-04-18 Thread D Haley
Hello,

I am the fedora maintainer for mathgl, but I also maintain a few debian 
packages. I would be most interested in seeing this back in debian -- has there 
been any progress on this?

Regards,

D. Haley


  



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Bug#564422: Ping

2010-04-18 Thread D Haley
I'll pull down the package tomorrow and have a quick look. I am a bit reticent 
to maintain it for a few reasons, (1) I believe in the ability to compare notes 
with other distribution's packages and (2) I believe my work is should be 
checked by someone for what I believe is a moderately important package. I'm 
quite willing to propose a few patches though.

--- On Mon, 4/19/10, Salvatore Bonaccorso  
wrote:

> From: Salvatore Bonaccorso 
> Subject: Re: Bug#564422: Ping
> To: "D Haley" , 564...@bugs.debian.org, "Manuel Prinz" 
> 
> Date: Monday, April 19, 2010, 12:59 AM
> Hi 
> 
> On Sun, Apr 18, 2010 at 05:46:00AM -0700, D Haley wrote:
> > I am the fedora maintainer for mathgl, but I also
> maintain a few
> > debian packages. I would be most interested in seeing
> this back in
> > debian -- has there been any progress on this?
> 
> I had still not time to work on it, sorry. Would you be
> interested to
> take it? If so, please note would be a good idea to have it
> maintained
> in the debian-science Group, IMHO. 
> 
> If you would like to work on it, don't worry, you can
> change the owner
> to you. It would be great to have mathgl finally updated.
> I'm sorry
> that, I was not able due to my current time constraints to
> work at all
> on these packages.
> 
> Bests
> Salvatore
> 


  



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Bug#564422: Updates

2010-04-19 Thread D Haley
I have done some updating to the package, but it is not in a working state (it 
should be a bit closer than it was). Just as I was committing to debian-science 
(after i inited a repo), SSH started timing out to alioth. :/ I will try to 
upload this tomorrow.

I will, in the coming week, have another crack at this to get it into a clean 
and working state.


  



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Bug#564422: Updates

2010-04-30 Thread D Haley
Hi,

I have updated the debian science repo. The package now builds (although the 
png dependencies are not quite handled correctly, and cause multiple calls to 
mathgl_example.). 

At any rate, the package builds so as far as I am concerned my work is done. 
Can someone else touch up the package and take maintenance of it? 

Notes:
* texinfo is throwing utf8 errors if I try to build the _ru documentation. I 
have disabled this for now.
* Upstream have committed changes to their repositories to solve the ldflags 
problem (see bug #92).
* I have not made the package lintian clean.


Thanks.

--- On Fri, 4/23/10, Salvatore Bonaccorso  
wrote:

> From: Salvatore Bonaccorso 
> Subject: Re: Bug#564422: Updates
> To: "D Haley" , 564...@bugs.debian.org
> Date: Friday, April 23, 2010, 6:00 PM
> Hi D.
> 
> On Mon, Apr 19, 2010 at 03:52:41PM -0700, D Haley wrote:
> > I have done some updating to the package, but it is
> not in a working
> > state (it should be a bit closer than it was). Just as
> I was
> > committing to debian-science (after i inited a repo),
> SSH started
> > timing out to alioth. :/ I will try to upload this
> tomorrow.
> > 
> > I will, in the coming week, have another crack at this
> to get it
> > into a clean and working state.
> 
> I saw you arleady commited package to debian-science,
> really cool.
> Tanks for working on it. 
> 
> I have this to forward at you got from Alexey:
> 
> On Mon, Dec 28, 2009 at 01:06:04PM +0300, Alexey Balakin
> wrote:
> > Dear Salvatore,
> >
> > I have one more comment. As Jim Hu had noted me, the
> GSL library is
> > GPL. So, I change a bit license for MathGL (some
> corrections were
> > already done in web site). The idea is
> >
> > "Generally MathGL is GPL library. However, you can use
> LGPL license
> > for MathGL core if you don't use wrapper classes
> (don't use file
> > mgl_w.h and SWIG-based interfaces) and disable GSL
> features (by
> > defining NO_GSL for library compilation)."
> >
> > I think that the MathGL version in DEB-packages should
> contain GSL.
> > So, it have to be GPL. Can you apply this change for
> Debian and Ubuntu
> > packages? During few days I'll update win32 binary
> packages too.
> >
> > --
> > All the best,
> > Alexey Balakin
> 
> Bests
> Salvatore
> 


  



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Bug#564422: Updates

2010-05-06 Thread D Haley
Hello,

The version control system used is git, so you can check it out with
git pull git://git.debian.org/git/debian-science/packages/mathgl.git

I added the man pages too, so that should help simplify solving the lintian 
errors.

Thanks.

--- On Thu, 5/6/10, Dimitrios Eftaxiopoulos  wrote:

> From: Dimitrios Eftaxiopoulos 
> Subject: Re: Bug#564422: Updates
> To: "D Haley" , 564...@bugs.debian.org
> Date: Thursday, May 6, 2010, 2:47 AM
> Hello,
> I am a user of mathgl under Debian unstable. I would like
> to see it back in 
> Debian. I tried to find the package in the debian-science
> repository
> 
> http://svn.debian.org/wsvn/debian-science/packages/
> 
> but I could not find it there. Could you please give me the
> address where 
> mathgl is comitted? I woul like to try to build it.
> 
> Thanks
> Dimitris
> 
> 
> Στις Παρασκευή 30 Απρίλιος 2010
> 23:34:20 γράψατε:
> > Hi,
> > 
> > I have updated the debian science repo. The package
> now builds (although
> > the png dependencies are not quite handled correctly,
> and cause multiple
> > calls to mathgl_example.).
> > 
> > At any rate, the package builds so as far as I am
> concerned my work is
> > done. Can someone else touch up the package and take
> maintenance of it?
> > 
> > Notes:
> > * texinfo is throwing utf8 errors if I try to build
> the _ru documentation.
> > I have disabled this for now. * Upstream have
> committed changes to their
> > repositories to solve the ldflags problem (see bug
> #92). * I have not
> > made the package lintian clean.
> > 
> > 
> > Thanks.
> > 
> > --- On Fri, 4/23/10, Salvatore Bonaccorso 
> 
> wrote:
> > > From: Salvatore Bonaccorso 
> > > Subject: Re: Bug#564422: Updates
> > > To: "D Haley" ,
> 564...@bugs.debian.org
> > > Date: Friday, April 23, 2010, 6:00 PM
> > > Hi D.
> > > 
> > > On Mon, Apr 19, 2010 at 03:52:41PM -0700, D Haley
> wrote:
> > > > I have done some updating to the package,
> but it is
> > > 
> > > not in a working
> > > 
> > > > state (it should be a bit closer than it
> was). Just as
> > > 
> > > I was
> > > 
> > > > committing to debian-science (after i inited
> a repo),
> > > 
> > > SSH started
> > > 
> > > > timing out to alioth. :/ I will try to
> upload this
> > > 
> > > tomorrow.
> > > 
> > > > I will, in the coming week, have another
> crack at this
> > > 
> > > to get it
> > > 
> > > > into a clean and working state.
> > > 
> > > I saw you arleady commited package to
> debian-science,
> > > really cool.
> > > Tanks for working on it.
> > > 
> > > I have this to forward at you got from Alexey:
> > > 
> > > On Mon, Dec 28, 2009 at 01:06:04PM +0300, Alexey
> Balakin
> > > 
> > > wrote:
> > > > Dear Salvatore,
> > > > 
> > > > I have one more comment. As Jim Hu had noted
> me, the
> > > 
> > > GSL library is
> > > 
> > > > GPL. So, I change a bit license for MathGL
> (some
> > > 
> > > corrections were
> > > 
> > > > already done in web site). The idea is
> > > > 
> > > > "Generally MathGL is GPL library. However,
> you can use
> > > 
> > > LGPL license
> > > 
> > > > for MathGL core if you don't use wrapper
> classes
> > > 
> > > (don't use file
> > > 
> > > > mgl_w.h and SWIG-based interfaces) and
> disable GSL
> > > 
> > > features (by
> > > 
> > > > defining NO_GSL for library compilation)."
> > > > 
> > > > I think that the MathGL version in
> DEB-packages should
> > > 
> > > contain GSL.
> > > 
> > > > So, it have to be GPL. Can you apply this
> change for
> > > 
> > > Debian and Ubuntu
> > > 
> > > > packages? During few days I'll update win32
> binary
> > > 
> > > packages too.
> > > 
> > > > --
> > > > All the best,
> > > > Alexey Balakin
> > > 
> > > Bests
> > > Salvatore
> 
> 






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Bug#592460: ITP: 3depict -- 3D valued point data visualisation and analysis

2010-08-10 Thread D Haley
Package: wnpp
Severity: wishlist
Owner: "d.haley" 


* Package name: 3depict
  Version : 0.0.1
  Upstream Author : D Haley 
* URL : http://threedepict.sourceforge.net
* License : GPL,
  Programming Lang: C++
  Description : 3D valued point data visualisation and analysis

Disclosure: I am upstream author



  



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Bug#589254: RFS - mapcatcher

2010-10-09 Thread D Haley
Hello,

I came across your g/mapcatcher package today, I had not heard of the project 
before. This looks like an excellent lightweight alternative to marble - I have 
already installed it on my machine (marble wont fit, it has way too many deps).

I can't sponsor you, however here are some comments on your debian-mentors 
package: 

* Program should use either mapcatcher or gmapcatcher consistently. If upstream 
wish to rename their project, use mapcatcher, if not, use gmapcatcher. Until I 
read your mailing list thread, I thought the G was for GTK. This is confusing 
as some things (eg the program) are labelled mapcatcher, and some things 
/usr/share/pyshared/* are labelled GMapCatcher. Consistency is key, with or 
without "G". :)

* Although marked as GPL2 or any later, the actual python programs do not have 
the pre-amble in the source files, as required by the licence. The upstream 
project website simply says GPL2, not GPL2 or later. This needs to be clarified 
by the upstream authors. THis is true of both the mapcatcher and mapdownloader 
python scripts, as well as for /usr/share/pyshared/gmapcatcher/*

* Project seems to include its own version of gps.py. Is there any reason that 
the python-gps package is not being used? Importing sources from upstream 
projects is not cool, as it means that updates are not sent to users in a 
timely fashion, and that duplication can be a problem. Secondly, this is a 
problem as it is unclear which files in the pyshared/gmapcatcher/ directory 
were actually written by the project, and thus are correctly licenced

* During the package build from the DSC, I get the following message:
WARNING:  Use of XS-Python-Version and XB-Python-Version fields in 
debian/control is deprecated with pysupport method; use debian/pyversions if 
you need to specify specific versions.
pyversions: missing XS-Python-Version in control file, fall back to 
debian/pyversions

*The installed /usr/share/pyshared/GMapCatcher-0.7.2.2.egg-info contains 
"UNKNOWN" entries. Please fill in the upstream author's details

*According to debian/copyright, there are two real authors, and then a 
pseudo-author "mapcatcher team". The upstream project states that the authors 
are : "pi3or...@gmail.com, helders...@gmail.com, maxim.ra...@gmail.com, and 
standa31...@gmail.com". This should be reflected in debian/copyright

Thanks,

D. Haley


  



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Bug#785657: RFA: opticalraytracer

2015-05-18 Thread D Haley
Package: wnpp
Severity: normal

Dear Maintainers/Developers,

I am intending to orphan opticalraytracer, as I no longer have the time
to develop my java packaging skills, and do not use java in the natural
course of my work. If anyone is interested in maintaining this package,
please feel free to do so. 

I am aware that the package has a low popcon score, and thus will be
unlikely to find a new maintainer, and so will attempt to perform any
work required on this package when I can. This may take some time however. 


Thanks!


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Bug#589254: Debian packaging

2013-05-04 Thread D Haley

 retitle 589254 ITP: mapcatcher -- offline map viewer
 owner 589254 !
 thanks


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Bug#589254: Info received (Debian packaging)

2013-05-05 Thread D Haley

Hi,

I've uploaded a near-"legal-clean" version of a mapcatcher debian 
package here:


https://gitorious.org/debian-mapcatcher/debian-mapcatcher

The only thing to be done from a legal perspective is to confirm that we 
can use "openanything.py", which uses the "python" licence.


Unfortunately, from a user perspective, much functionality is removed.

All commercial map providers have been removed (OpenTransportMap has 
been added) and,  more importantly, due to the original code being in 
probable violation of google's Terms of Service, place searching (which 
was done via google maps API) has been removed.


If someone is able to convert this to use geoNames (I've never tried 
this, so I don't know what to do), that would be great.


Does anyone have any input here? I would welcome some suggestions on 
package improvements, as I am not a python, nor python packaging guru.


Thanks.


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Bug#589254: Progress update

2013-05-15 Thread D Haley

The git repo now has commits that solve the previous issues.

* Openanything.py is now removed by a patch, and has been replaced by 
urllib.
* Geonames support has been added, so users will get (a somewhat 
not-so-great based upon random testing) search. OSM apparently has a 
better database, but I have no idea about hooking into this API.


So the package should be 100% legally clean now.

I've posted a package to debian mentors:
https://mentors.debian.net/package/mapcatcher


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Bug#754595: RFP: easymercurial -- Easy to use mercurial GUI

2014-07-12 Thread D Haley
Package: wnpp
Severity: wishlist

* Package name: easymercurial
  Version : 1.3.0
  Upstream Author : Chris Cannam , Jari Korhonen 
* URL : http://easyhg.org/
* License : GPL
  Programming Lang: Python
  Description : Easy to use mercurial GUI

EasyMercurial is a simple user interface for the Mercurial distributed
version control system. The program is designed for non-advanced users
of distributed version control.

I'm happy to put in a bit of effort in getting this Debian-ised, 
assuming there are no issues i have overlooked. I don't think
I can provide stable maintenance, as I am not sufficiently python
proficient - particularly .


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Bug#674135: Interest

2017-05-11 Thread D Haley
Hi,

I'm using this indirectly in some work I'm doing. I might package this
when I have some spare time. It is required for the octopus DFT solver:

http://octopus-code.org/wiki/Main_Page

If anyone else has some interest in this, please do let me know, such as
to minimise overlap.



Bug#876059: ITP: libvd -- Volume Development library

2017-09-17 Thread D Haley
Package: wnpp
Severity: wishlist
Owner: D Haley 

* Package name: libvd
  Version : 1.1.0+svn7
  Upstream Author : Herve Lombaert
* URL : http://cim.mcgill.ca/~lombaert/libvd-doc/
* License : GPL
  Programming Lang: C++
  Description : Volume Development library

 A small opengl C++ library for 3D and 4D volume rendering. This is
 implemented using 3D textures and fragment shaders. The library is
 relatively simple compared to major frameworks, and is aimed at both
 learners, and those who wish to integrate this functionality into their
 own projects.

 This will be an optional dependence for the upcoming 3Depict 0.0.21 release. 
This is being maintained as a member of the debian-science team



Bug#876059: ITP: libvd -- Volume Development library

2017-09-17 Thread D Haley
A repository has now been created on alioth:

https://anonscm.debian.org/git/debian-science/packages/libvd.git

Some lintian errors remain (around triggers).



Bug#739080: ITP: tapsim -- Atom probe experiment simulator

2014-02-15 Thread D Haley
Package: wnpp
Severity: wishlist
Owner: D Haley 

* Package name: tapsim
  Version : 1.0b.r766
  Upstream Author : Christian Oberforfer  http://www.uni-muenster.de/Physik.MP/Schmitz/en/tapsim/
* License : GPL
  Programming Lang: C, C++
  Description : Atom probe experiment simulator

 Simulation package for Atom Probe measurements of samples with
 heterogenous evaporation properties. It allows the theoretical analysis
 of tips with arbitrary shape, with arbitrary atomic structure and
 well-defined chemical composition. In this regard, practically no
 limitations exist. Each tip atom is represented by a Wigner-Seitz cell.


Sponsor is required. Plan to maintain as part of debian-science.


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Bug#739080: Acknowledgement (ITP: tapsim -- Atom probe experiment simulator)

2014-02-15 Thread D Haley

Now clonable from: https://bitbucket.org/mycae_gmx/tapsim_debian.git


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Bug#982265: ITP: libatomprobe -- Library for Atom Probe Tomography computations

2021-02-07 Thread D Haley
Package: wnpp
Severity: wishlist
Owner: D Haley 

* Package name: libatomprobe
  Version : 20210207
  Upstream Author : D Haley 
* URL : http://apttools.sourceforge.io/
* License : GPLv3
  Programming Lang: C++, Python
  Description : Library for processing Atom Probe Tomography (APT) data

 This provides a C++ library for the scientific analysis
 of real valued point data (x,y,z,value). This is primarily targeted
 towards Atom probe tomography applications, but may prove useful to
 other applications as well.
 .
 The package includes both its own C++ and SWIG based python interfaces

This package provide tools for processing mass spectra data from Atom
Probe systems, such as developed by Ametek. Functions in the library
include spectra processing algorithms, 3D point data computation, and
file IO routines for specific APT types.

It is anticipated that this will become a future dependency for the
existing 3Depict package. This is intended to be maintained as part of
the Debian Science team.

There are no other packages that provide the coverage of data processing
routines in APT, as this is specialised research equipment.

A sponsor is needed, to quality-check and ultimately for upload.