Re: vim plugin dependency and libruby

2015-12-01 Thread Vincent Danjean
Le 28/11/2015 22:38, James McCoy a écrit :
> On Sun, Nov 29, 2015 at 08:24:15AM +1100, Craig Small wrote:
>> I've been helping someone with a vim plugin called vim-command-t[1] and
>> we've both hit a snag.  The problem is that when I used pbuilder it
>> linked the plugin to libruby 2.2 but my vim is linked to libruby2.1
> 
> Your vim is outdated, then.  Vim was rebuilt over 2 weeks ago as part of
> the Ruby 2.2 transition.  The only time there should be a discrepancy is
> in the middle of a transition.
> 
>> Now, the package has in its dependencies libruby2.2. libruby2.2 and
>> libruby2.1 are both installed. As far as dpkg is concerned, all is well.
>>
>> Is there some way of putting some dependency onto vim to say "I want
>> the vim linked to libruby2.2". One idea is to figure out what version
>> they did link to it and put that in, but that's hard to maintain and
>> doesn't work across architectures nicely.
>>
>> Generically the problem is:
>>   binary foo linked to libbar1, control file pulls in libbar1
>>   plugin baz linked to libbar2, control file pulls in libbar2
>>
>> But when foo tries to load plugin baz, it fails. Is it a problem with
>> the plugin? Should it be using "ruby things" via the binary?
> 
> No, it's just normal turbulence during a transition.  I don't think
> there's anything in particular that needs to be done.

I cannot find a vim plugin linked to libruby2.[12] in the archive.
So, for now, nothing is done, indeed.

  But, once such a plugin will exist, something will have to be
done on ruby transitions, to ensure that partial upgrades work.
  Generally, this involves setting up manual Breaks lines in new
packages when the transition occurs and/or defining virtual packages
(such as vim-api-libruby2.2) that plugins depends on (automatically or
not).
  The goal is to ensure that is will not be possible for a user to
upgrade only the plugin or only the core with partial upgrades.

  I really suffer from the R transition that did not fix the partial
upgrade scenario between wheezy and jessie (see #710289). I really
think that such scenario must be correctly handled by maintainers,
either manually if transitions are rare and do not affect to many
packages or with automated helpers.

  And, for the new plugin (vim-command-t), either a minimal version
should be added to the vim dependency or a Breaks on older vim version
must be added. This would ensure that partial upgrades (vim from
jessie and vim-command-t from testing) will be forbidden by APT.
  Not that the situation can be more tricky here as there exists several
vim packages (ie I did not know if depending on a particular vim version
will ensure that the package containing the binary linked to libruby2.X
(ie vim-gnome, ...) will be at the same version)

  Regards,
Vincent

> Cheers,

-- 
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Bug#806828: ITP: dawg -- program to simulate the evolution of recombinant DNA sequences

2015-12-01 Thread Kevin Murray
Package: wnpp
Severity: wishlist
Owner: Kevin Murray 

* Package name: dawg
  Version : 1.2.0
  Upstream Author : Reed A. Cartwright
* URL : http://scit.us/projects/dawg
* License : GPL-2
  Programming Lang: C++
  Description : program to simulate the evolution of recombinant DNA 
sequences


DNA Assembly with Gaps (Dawg) is an application designed to simulate the
evolution of recombinant DNA sequences in continuous time based on the robust
general time reversible model with gamma and invariant rate heterogeneity and
a novel length-dependent model of gap formation. The application accepts
phylogenies in Newick format and can return the sequence of any node,
allowing for the exact evolutionary history to be recorded at the discretion
of users. Dawg records the gap history of every lineage to produce the true
alignment in the output. Many options are available to allow users to
customize their simulations and results.



Bug#806838: ITP: lua-nginx-redis-connector -- Connection utilities for lua-nginx-redis

2015-12-01 Thread 陳昌倬
Package: wnpp
Severity: wishlist
Owner: "ChangZhuo Chen (陳昌倬)" 

* Package name: lua-nginx-redis-connector
  Version : v0.02
  Upstream Author : James Hurst
* URL : http://www.example.org/
* License : BSD-2-clause
  Programming Lang: Lua
  Description : Connection utilities for lua-nginx-redis

 Connection utilities for lua-resty-redis, making it easy and reliable
 to connect to Redis hosts, either directly or via Redis Sentinel.

-- 
ChangZhuo Chen (陳昌倬) 
Debian Developer
Key fingerprint = EC9F 905D 866D BE46 A896  C827 BE0C 9242 03F4 552D


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