Re: server certificates/key pairs and CA directories

2015-08-03 Thread Kurt Roeckx
On Tue, Jul 21, 2015 at 04:50:42PM +, Thorsten Glaser wrote:
> Daniel Pocock  pocock.pro> writes:
> 
> > I looked at the package ssl-cert to try and understand and there I found
> > that it is using /etc/ssl/certs for server certs while other packages
> 
> Do NOT do that.
> 
> It's causing trouble because some software (e.g. Gajim) reads all files
> under /etc/ssl/certs/ not just the hashed ones - presumably because
> OpenSSL 1.x changed the algorithm used for the hash, while GnuTLS
> keeps using the OpenSSL 0.x one (in MirBSD I just symlink them both).

In Debian we've been adding both the new and the old hash.  Does
anybody know this is still needed?


Kurt


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Re: How to deal with fixed but open bugs

2015-08-03 Thread Kurt Roeckx
On Thu, Jul 30, 2015 at 04:06:51PM +0200, Simon Richter wrote:
> Hi,
> 
> On 30.07.2015 05:12, Nikolaus Rath wrote:
> 
> > I'm looking at the bug overview page for src:python3-llfuse
> > (https://bugs.debian.org/cgi-bin/pkgreport.cgi?src=python-llfuse). The
> > first thing it lists is the apparently nasty grave bug #775056.
> 
> > However, this bug only exists in wheezy, it's fixed in both jessie and
> > sid. As far as I can tell, the bug is correctly marked with found+fixed.
> 
> If the bug exists in wheezy, and wheezy is still a supported release,
> then there are users affected by it.

And if it affects wheezy, please consider fixing it in wheezy.

> If the bug doesn't exist in wheezy, then it should not have been
> reported against a version that ended up in wheezy, so I'd simply
> correct that then ("found" with a version after the wheezy release,
> "notfound" with the originally reported version).

He probably also needs a "close".


Kurt


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Bug#794447: ITP: pb-genomicconsensus -- Pacific Biosciences variant and consensus caller

2015-08-03 Thread Afif Elghraoui
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team 
Control: block 787977 by !

* Package name: pb-genomicconsensus
  Version : 1.0.0
  Upstream Author : Pacific Biosciences 
* URL : https://github.com/PacificBiosciences/GenomicConsensus
* License : BSD
  Programming Lang: Python
  Description : Pacific Biosciences variant and consensus caller

The GenomicConsensus package provides Quiver, Pacific Biosciences'
flagship consensus and variant caller. Quiver is an algorithm that finds
the maximum likelihood template sequence given PacBio reads of the template.
These reads are modeled using a conditional random field approach that
prescribes a probability to a read given a template sequence. In addition to
the base sequence of each read, Quiver uses several additional quality value
covariates that the base caller provides.

This package is part of the SMRTAnalysis suite (#787977), to be built and
maintained by the Debian Med team.


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Bug#794450: ITP: pb-consensuscore -- library of multiple nucleotide sequence consensus routines

2015-08-03 Thread Afif Elghraoui
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team 
Control: block 794447 by -1

* Package name: pb-consensuscore
  Version : 1.0.0
  Upstream Author : Pacific Biosciences 
* URL : https://github.com/PacificBiosciences/ConsensusCore
* License : BSD
  Programming Lang: C++, Python
  Description : library of multiple nucleotide sequence consensus routines

ConsensusCore is a library of algorithms for Pacific Biosciences multiple
sequence consensus that powers Quiver, a variant and consensus caller
for single-molecule sequencing reads.

This package is a dependency of pb-genomicconsensus (#794447), a component of
the SMRTAnalysis suite (#787977). These are to be built and maintained by the
Debian Med team.


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Re: Feature Debian in MeetAdvisors Blog!

2015-08-03 Thread Riley Baird
Hi Angela,

> I am writing a blog at MeetAdvisors.com on companies that are driving
> their industries forward, I would love to include you!
> 
> I'll be looking for why you do what you, what your passion is, and to
> gather a piece of advice you'd like to share with our community.

Have you got a response yet? If not, you might want to try sending this
message to our publicity department. Its email address is
pr...@debian.org

Thanks for taking an interest in Debian,

Riley Baird


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Re: Follow-up transitions for the libstdc++6 ABI changes

2015-08-03 Thread Norbert Preining
On Mon, 03 Aug 2015, Matthias Klose wrote:
>  - having a vacation and hoping the mess is cleaned up when
>you come back.

Good luck with that one in the beginning of August - my guess
is that there couldn't be worse timed transition if you want
devs to be available ;-)

Enjoy ... I will be one of those *not* available over the next 2 weeks!

Norbert


PREINING, Norbert   http://www.preining.info
JAIST, Japan TeX Live & Debian Developer
GPG: 0x860CDC13   fp: F7D8 A928 26E3 16A1 9FA0  ACF0 6CAC A448 860C DC13



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Bug#794468: general: no watchdog support in installer kernel

2015-08-03 Thread Dominik George
Package: general
Severity: normal

The Debian installer images for jessie apparently do not have watchdog
support enabled in the kernel, so they do not send heartbeats to the
BIOS.

This results in the installer system aborting and the machine resetting
after five minutes, or whatever the BIOS sees as watchdog timeout.

Disabling watchdog support during installation is obviously a simple
workaround, but it could still be enabled as to my knowledge, it does
not make the kernel significantly better.


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Bug#794470: ITP: openxcom -- Open-source clone of the original X-Com game

2015-08-03 Thread Alexandre Detiste
Package: wnpp
Severity: wishlist
Owner: Alexandre Detiste 

* Package name: openxcom
  Version : 1.1 (not yet released)
  Upstream Author : SupSuper @ GitHub, OpenXcom Developers
* URL : http://openxcom.org/
* License : GPL 3
  Programming Lang: C
  Maintainer  : Debian Games Team
  Description : Open-source clone of the original X-Com game

As this needs the original game data, as currently still
sold on Steam, this game would go in contrib.

Upcoming game-data-packager can automacialy create a .deb
for local consumption with these data.

A draft package is available here:
http://anonscm.debian.org/cgit/pkg-games/openxcom.git/

The current draft package is built upon a recent git snapshot,
because the commercial data layout has evolved since v1.0
to allow room for 'Terror from the deep' sequel.


There is a regression in libyaml-cpp0.5 0.5.2;
one needs to downgrade to 0.5.1-1 before building this draft package.

This will be solved in next libyaml-cpp release:
https://github.com/jbeder/yaml-cpp/commit/b426fafff6238dda8d86fa668f585cba732dd272


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Re: Bug#794468: general: no watchdog support in installer kernel

2015-08-03 Thread Cyril Brulebois
Control: reassign -1 src:debian-installer

Hi,

Dominik George  (2015-08-03):
> The Debian installer images for jessie apparently do not have watchdog
> support enabled in the kernel, so they do not send heartbeats to the
> BIOS.
> 
> This results in the installer system aborting and the machine resetting
> after five minutes, or whatever the BIOS sees as watchdog timeout.
> 
> Disabling watchdog support during installation is obviously a simple
> workaround, but it could still be enabled as to my knowledge, it does
> not make the kernel significantly better.

Reassigning to debian-installer, which is likely to be a way better
place to start than general.

It might just be a matter of setting the right option (HEARTBEAT, as a
wild guess) on the kernel side though, so I'm copying the kernel
maintainers. They're welcome to steal the bug from src:debian-installer
if they feel it's appropriate.

Looking at svn or at installed kernels, I don't see this option set
anywhere but sh4 and m68k though, so I'm not sure the installed system
would be different than the installer one…

Mraw,
KiBi.


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Description: Digital signature


Bug#794468: marked as done (general: no watchdog support in installer kernel)

2015-08-03 Thread Debian Bug Tracking System
Your message dated Mon, 3 Aug 2015 14:10:04 +0200
with message-id <20150803121004.gb31...@bongo.bofh.it>
and subject line Re: Bug#794468: general: no watchdog support in installer 
kernel
has caused the Debian Bug report #794468,
regarding general: no watchdog support in installer kernel
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
794468: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=794468
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: general
Severity: normal

The Debian installer images for jessie apparently do not have watchdog
support enabled in the kernel, so they do not send heartbeats to the
BIOS.

This results in the installer system aborting and the machine resetting
after five minutes, or whatever the BIOS sees as watchdog timeout.

Disabling watchdog support during installation is obviously a simple
workaround, but it could still be enabled as to my knowledge, it does
not make the kernel significantly better.
--- End Message ---
--- Begin Message ---
On Aug 03, Dominik George  wrote:

> The Debian installer images for jessie apparently do not have watchdog
> support enabled in the kernel, so they do not send heartbeats to the
> BIOS.
> 
> This results in the installer system aborting and the machine resetting
> after five minutes, or whatever the BIOS sees as watchdog timeout.
Your system is misconfigured: the watchdog must not engage until the 
kernel configures it.

-- 
ciao,
Marco


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--- End Message ---


Processed: Re: Bug#794468: general: no watchdog support in installer kernel

2015-08-03 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 src:debian-installer
Bug #794468 {Done: m...@linux.it (Marco d'Itri)} [general] general: no watchdog 
support in installer kernel
Bug reassigned from package 'general' to 'src:debian-installer'.
Ignoring request to alter found versions of bug #794468 to the same values 
previously set
Ignoring request to alter fixed versions of bug #794468 to the same values 
previously set

-- 
794468: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=794468
Debian Bug Tracking System
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Bug#794479: ITP: uglifycss -- CSS mangler/compressor toolkit

2015-08-03 Thread Mike Gabriel
Package: wnpp
Severity: wishlist
Owner: Mike Gabriel 

* Package name: uglifycss
  Version : 0.0.15
  Upstream Author : Franck Marcia 
* URL : https://github.com/fmarcia
* License : Expat
  Programming Lang: Javascript
  Description : CSS mangler/compressor toolkit

 UglifyCSS is a port of YUI Compressor to NodeJS for its CSS part. Its
 name is a reference to the awesome UglifyJS but UglifyCSS is not a CSS
 parser. Like YUI CSS Compressor, it applies many regexp replacements.
 Note that a port to JavaScript is also available in the YUI Compressor
 repository.
 .
 UglifyCSS passes successfully the test suite of YUI compressor CSS.
 .
 Be sure to submit valid CSS to UglifyCSS or you could get weird results.

 This package will be maintained under the umbrella of the Debian Javascript
 Maintainers team and is a nice-to-have for getting libjs-jquery-ui updated
 (and indepent from the YUI compressor) in Debian unstable.


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Bug#794482: ITP: ganeti-os-noop -- A dummy no-op OS provider for Ganeti

2015-08-03 Thread Mike Gabriel
Package: wnpp
Severity: wishlist
Owner: Mike Gabriel 

* Package name: ganeti-os-noop
  Version : 0.1
  Upstream Author : Apollon Oikonomopoulos 
* URL : 
https://github.com/grnet/ganeti-os-noop/blob/master/debian/copyright
* License : GPL
  Programming Lang: Bash
  Description : A dummy no-op OS provider for Ganeti

 Ganeti is a virtual server cluster management software tool built on top
 of the Xen and KVM virtualization technologies and other Free Software.
 After setting it up it will provide you with an automated environment to
 manage highly available virtual machine instances.
 .
 This package provides a no-op OS for Ganeti. If virtual machines use this
 no-op OS, then a "Reinstall" action in Ganeti will not have any effect,
 virtual machines will not be re-installed (i.e., wiped) if a reinstall
 action is requested via gnt-instance.
 .
 Setting the OS of an instance to "no-op" is ideal for virtual machines
 that have been installed from ISO CD/DVD image.

 This package will be maintained under the umbrella of the Debian Ganeti
 Team.


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Bug#794487: ITP: python-django-babel -- Utilities for using Babel in Django

2015-08-03 Thread Thomas Goirand
Package: wnpp
Severity: wishlist
Owner: Thomas Goirand 

* Package name: python-django-babel
  Version : 0.4.0
  Upstream Author : Thomas Grainger 
* URL : https://github.com/graingert/django-babel
* License : BSD-3-clause
  Programming Lang: Python
  Description : Utilities for using Babel in Django

 This package contains various utilities for integration of Babel into the
 Django web framework:
  * A message extraction plugin for Django templates.
  * A middleware class that adds the Babel Locale object to requests.
  * A set of template tags for date and number formatting.
 .
 Babel provides a message extraction framework similar to GNU xgettext, but
 more extensible and geared towards Python applications. While Django does
 provide wrapper scripts for making the use of xgettext more convenient, the
 extraction functionality is rather limited. For example, you can't use
 template files with an extension other than .html, and everything needs to be
 in your project package directory.

This is a new dependency for the OpenStack dashboard: Horizon.


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Re: Adding support for LZIP to dpkg, using that instead of xz, archive wide

2015-08-03 Thread Jakub Wilk

* Antonio Diaz Diaz , 2015-07-27, 19:11:
"Lzip will correctly decompress a file which is the concatenation of 
two or more compressed files. The result is the concatenation of the 
corresponding uncompressed files. Integrity testing of concatenated 
compressed files is also supported."


Whatever follows a file that is not a valid header is classified as 
"trailing garbage" and ignored.


Sounds like a serious design flaw that could lead to data loss.

The attached files differ only by one bit. The output for the corrupted 
file is truncated, yet there is no error or warning:


$ cmp -l good.lz corrupted.lz
41 114 115

$ lzip -d < good.lz; echo $?
foo
bar
0

$ lzip -d < corrupted.lz; echo $?
foo
0



Xz has broken with this tradition


Glad to hear that.

--
Jakub Wilk


good.lz
Description: Binary data


corrupted.lz
Description: Binary data


Re: Ad-hoc survey of existing Debian git integration tools

2015-08-03 Thread Barry Warsaw
On Jul 21, 2015, at 06:46 PM, Ian Jackson wrote:

>That is, the dgit git tree contains the patches in debian/patches/ but
>also contains the implied changes in the main source code.  If you add
>commits yourself to the dgit git tip, new patches will generated from
>your commits.

I think then that dgit's requirements are not compatible with git-dpm
currently.  IIUC, git-dpm presents you with either a
patches-unapplied-but-with-debian/ view, or a patches-applied-no-debian/ view.

E.g. `debcheckout python-pip`

You'll be in the master branch which is the packaging branch, but `quilt
applied` returns nothing, and `quilt unapplied` shows you that the patches are
not yet applied.

`git-dpm checkout-patched` leaves you in the transient `patched` branch, where
the patches are applied, but you do *not* have a debian/ directory.

`git-dpm update-patches` converts the commits back to debian/patches, but
again leaves you patches unapplied.

There's no current view where you have both patches applied *and* a debian/
directory.

(FWIW, bzr-builddeb actually does present you with exactly this view,
patches-applied-with-debian/)

Cheers,
-Barry


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Bug#794503: ITP: mopidy-podcast -- Mopidy extension for searching and browsing podcasts

2015-08-03 Thread Stein Magnus Jodal
Package: wnpp
Severity: wishlist
Owner: Stein Magnus Jodal 

* Package name: mopidy-podcast
  Version : 1.1.1
  Upstream Author : Thomas Kemmer 
* URL : https://github.com/tkem/mopidy-podcast
* License : Apache-2.0
  Programming Lang: Python
  Description : Mopidy extension for searching and browsing podcasts

Mopidy is a music server which can play music from multiple sources,
like your local hard drive, radio streams, and from Spotify and
SoundCloud.

This package provides a Mopidy extension for searching and browsing
podcasts. To be useful, it must be combined with extensions that provide
podcast content, like mopidy-podcast-gpodder and mopidy-podcast-itunes.


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Bug#794513: ITP: mopidy-podcast-gpodder -- Mopidy extension for searching and browsing gpodder.net podcasts

2015-08-03 Thread Stein Magnus Jodal
Package: wnpp
Severity: wishlist
Owner: Stein Magnus Jodal 

* Package name: mopidy-podcast-gpodder
  Version : 1.0.0
  Upstream Author : Thomas Kemmer 
* URL : https://github.com/tkem/mopidy-podcast-gpodder
* License : Apache-2.0
  Programming Lang: Python
  Description : Mopidy extension for searching and browsing gpodder.net 
podcasts

Mopidy is a music server which can play music from multiple sources,
like your local hard drive, radio streams, and from Spotify and
SoundCloud.

This package provides a Mopidy extension for searching and browsing
podcasts from the gpodder.net web service.


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Bug#794514: ITP: mopidy-podcast-itunes -- Mopidy extension for searching and browsing iTunes podcasts

2015-08-03 Thread Stein Magnus Jodal
Package: wnpp
Severity: wishlist
Owner: Stein Magnus Jodal 

* Package name: mopidy-podcast-itunes
  Version : 1.0.0
  Upstream Author : Thomas Kemmer 
* URL : https://github.com/tkem/mopidy-podcast-itunes
* License : Apache-2.0
  Programming Lang: Python
  Description : Mopidy extension for searching and browsing iTunes podcasts

Mopidy is a music server which can play music from multiple sources,
like your local hard drive, radio streams, and from Spotify and
SoundCloud.

This package provides a Mopidy extension for searching and browsing
podcasts on the Apple iTunes Store.


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Re: Ad-hoc survey of existing Debian git integration tools

2015-08-03 Thread Ian Campbell
On Mon, 2015-08-03 at 14:37 -0400, Barry Warsaw wrote:
> On Jul 21, 2015, at 06:46 PM, Ian Jackson wrote:
> 
> >That is, the dgit git tree contains the patches in debian/patches/ 
> but
> >also contains the implied changes in the main source code.  If you 
> add
> >commits yourself to the dgit git tip, new patches will generated 
> from
> >your commits.
> 
> I think then that dgit's requirements are not compatible with git-dpm
> currently.  IIUC, git-dpm presents you with either a
> patches-unapplied-but-with-debian/ view, or a patches-applied-no
> -debian/ view.
> 
> E.g. `debcheckout python-pip`

I'm looking at "debcheckout grub2" since it is one I'm a bit familiar
with.

> You'll be in the master branch which is the packaging branch, but `quilt
> applied` returns nothing, and `quilt unapplied` shows you that the patches are
> not yet applied.

But git log shows that they are, it's just that Quilt is unaware of
this (no .pc directory in git). Perhaps grub and python-pip differ here
but I don't think so.

AIUI this is compatible with dgit, although I've not tried it.

BTW, IIRC Colin had somewhere (on his blog?) a script which could
reconstruct a .pc, although I think with git-dpm you never actually
need to use quilt, since you should instead be git-dpm checkout-patched
+ git rebase.

FWIW "apt-get source grub2" does create the .pc directory.

Ian.


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