Bug#737314: ITP: seqtk -- sampling, trimming, fastq2fasta, subsequence, reverse complement
Package: wnpp Severity: wishlist Owner: Andreas Tille * Package name: seqtk Version : 1.0 Upstream Author : Heng Li * URL : https://github.com/lh3/seqtk * License : MIT Programming Lang: C Description : sampling, trimming, fastq2fasta, subsequence, reverse complement Currently, seqtk supports quality based trimming with the phred algorithm, converting fastq to fasta, reverse complementing sequences, extracting or masking subsequences in regions given in a BED/name list file, and more. It contains a subsampling module to sample exactly n sequences or a fraction of sequences. . Seqtk supports both fasta and fastq input files, which can be optionally gzip compressed. This package is maintained by the Debian Med team and was created at the Debian Med Sprint at request of Brad Chapman. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201151639.18745.49268.report...@mail.an3as.eu
Bug#737327: ITP: dnaclust -- tool for clustering millions of short DNA sequences
Package: wnpp Severity: wishlist Owner: Andreas Tille * Package name: dnaclust Version : 3 Upstream Author : Mohammadreza Ghodsi * URL : http://dnaclust.sourceforge.net/ * License : GPL3+ Programming Lang: C++ Description : tool for clustering millions of short DNA sequences dnaclust is a tool for clustering large number of short DNA sequences. The clusters are created in such a way that the "radius" of each clusters is no more than the specified threshold. . The input sequences to be clustered should be in Fasta format. The id of each sequence is based on the first word of the seqeunce in the Fasta format. The first word is the prefix of the header up to the first occurance of white space characters in the header. This package is maintained by the Debian Med team and was packaged as a demonstration in the Debian Med workshop at request of Tim. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201184244.23960.33810.report...@mail.an3as.eu
Bug#737335: general: Resets pulseaudio volume to 100% after pause
Package: general Severity: important Dear Maintainer, * What led up to the situation? use subtitle-composer with phonon. Set master level to a value < 100, play video, pause video, press play. * What was the outcome of this action? Something resets the master volume to 100 upon resuming from pause. Very loud sound, pain in my ears. * What outcome did you expect instead? Painless enjoyment of nice, quiet videos. Note: i have phonon-backend-vlc version over 0.6.0-1 ! (debian-jessie latest) Also i use veromix as my mixer. Pulseaudio is set to use a single daemon! daemonize = yes system-instance = yes Let me know if you need more data, please. -- System Information: Debian Release: jessie/sid APT prefers testing-updates APT policy: (500, 'testing-updates'), (500, 'testing') Architecture: amd64 (x86_64) Kernel: Linux 3.12-1-amd64 (SMP w/2 CPU cores) Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8) Shell: /bin/sh linked to /bin/dash -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201200421.3397.74330.reportbug@moli-desktop
Reproducing build error / environment
Hi all, I’m currently having trouble reproducing a build error – see http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735757 – which occurs for package fizmo on amd64. While the problem itself shouldn’t be that hard to fix (an include path is incorrect) I’d like to be able to reproduce the error so I can be sure that the new version really fixes it. I’ve tried by setting up a fresh sid installation on the same architecture and put in all the current patches, however I’m not able to reproduce the problem (build works fine without error). What’s the best way to reproduce the environment the actual build machine is using? Thanks in advance, Christoph. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/8f47403e-ab3e-4919-b075-6af05a004...@spellbreaker.org
Re: Reproducing build error / environment
* Christoph Ender , 2014-02-01, 21:47: I’m currently having trouble reproducing a build error – see http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735757 My guess is that the root cause is #735782. -- Jakub Wilk -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201210720.ga1...@jwilk.net
Bug#737335: general: Resets pulseaudio volume to 100% after pause
reassign 737335 kde-runtime 4:4.13.3-1 tag 737335 upstream thanks Hi! This seems to be a bug in kde-runtime's knotify4, which I think has already been reported (although I don't remember if correctly reassigned to kde-runtime). For the moment I'm reassigning this bug to kde-runetime. Thanks, Lisandro. -- Los chicos tienen un mayor dominio de la tecnología (y las habilidades y lenguaje que eso implica) que los adultos con los que se relacionan. Por lo general saben más que sus propios padres, sus docentes, sus pediatras, psicólogos, que los políticos y funcionarios de sus comunidades. Eso afectó la autoridad que tenía un adulto para habilitar al mundo. Luis Pescetti http://www.luispescetti.com/regale-su-obra/ Lisandro Damián Nicanor Pérez Meyer http://perezmeyer.com.ar/ http://perezmeyer.blogspot.com/ signature.asc Description: This is a digitally signed message part.
Processed: Re: Bug#737335: general: Resets pulseaudio volume to 100% after pause
Processing commands for cont...@bugs.debian.org: > reassign 737335 kde-runtime 4:4.13.3-1 Bug #737335 [general] general: Resets pulseaudio volume to 100% after pause Bug reassigned from package 'general' to 'kde-runtime'. Ignoring request to alter found versions of bug #737335 to the same values previously set Ignoring request to alter fixed versions of bug #737335 to the same values previously set Bug #737335 [kde-runtime] general: Resets pulseaudio volume to 100% after pause There is no source info for the package 'kde-runtime' at version '4:4.13.3-1' with architecture '' Unable to make a source version for version '4:4.13.3-1' Marked as found in versions 4:4.13.3-1. > tag 737335 upstream Bug #737335 [kde-runtime] general: Resets pulseaudio volume to 100% after pause Added tag(s) upstream. > thanks Stopping processing here. Please contact me if you need assistance. -- 737335: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=737335 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/handler.s.c.13912887687815.transcr...@bugs.debian.org
Bug#737352: ITP: ajaxometer -- webbased download and upload speed test utility
Package: wnpp Severity: wishlist Owner: Frank Piotrowski * Package name: ajaxometer Version : 1.0.1 Upstream Author : Akita Noek * URL : http://sourceforge.net/projects/ajaxometer * License : BSD Programming Lang: PHP & JavaScript Description : webbased download and upload speed test utility AJAXOmeter is a web-based bandwidth testing utility implemented in PHP, SVG, and JavaScript. It tests http-request latency and upload/download speeds to the web server. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201221853.19898.5963.reportbug@localhost
Re: Re: Bug#1393: dpkg does not need splitting
Raingsei Heang writes ("Re: Re: Bug#1393: dpkg does not need splitting"): > > > Sent from my iPhone ? Is this some kind of spam, or what ? I can't find offhand what #1393 was (I haven't searched my archives). iw...@cus.cam.ac.uk used to be me. (Indeed the entire BTS ran out of that account for the first bit of its life, but I don't think that's relevant here.) Ian. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/21229.33300.558295.563...@chiark.greenend.org.uk
Bug#737356: ITP: cryptography -- a Python library which exposes cryptographic recipes and primitives.
Package: wnpp Severity: wishlist Owner: Tristan Seligmann * Package name: cryptography Version : 0.1 Upstream Author : Alex Gaynor, Hynek Schlawack, Donald Stufft, Laurens Van Houtven, Jean-Paul Calderone, Christian Heimes, Paul Kehrer, and individual contributors. * URL : https://cryptography.io/ * License : Apache License, Version 2.0 Programming Lang: Python Description : a Python library which exposes cryptographic recipes and primitives. The cryptography library is designed to be a "one-stop-shop" for all your cryptographic needs in Python. As an alternative to the libraries that came before it, cryptography tries to address some of the issues with those libraries: - Lack of PyPy and Python 3 support. - Lack of maintenance. - Use of poor implementations of algorithms (i.e. ones with known side-channel attacks). - Lack of high level, "Cryptography for humans", APIs. - Absence of algorithms such as AES-GCM. - Poor introspectability, and thus poor testability. - Extremely error prone APIs, and bad defaults. I will probably be maintaining this in DPMT. The binary package name will be python-cryptography as per the standard Python naming convention. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140201234040.3234.29142.report...@elvandar.mithrandi.net
Transition of Icedove 24.2.0 to testing
Hello release team, as Mike asked a few days before for Iceweasel, would it be possible to force the transition of the current Icedove version 24.2.0 from unstable to testing before Christoph will prepare the package for stable-security? I'm currently able to build a version for Wheezy but it needs a little bit further tests before it can be uploaded by Christoph. -- Regards Carsten signature.asc Description: OpenPGP digital signature
Bug#737362: ITP: libcrypt-pbkdf2-perl -- Perl implementation of PBKDF2 password hash algorithm
Package: wnpp Severity: wishlist Owner: Russ Allbery * Package name: libcrypt-pbkdf2-perl Version : 0.10 Upstream Author : Andrew Rodland * URL : http://metacpan.org/release/Crypt-PBKDF2 * License : GPL-1+ or Artistic Programming Lang: Perl Description : Perl implementation of PBKDF2 password hash PBKDF2 (part of the PKCS#5 standard) is a secure password hashing algorithm that uses the techniques of "key strengthening" to make the complexity of a brute-force attack arbitrarily high. This module supports SHA-1 and SHA-2 as the underlying hash functions natively and can also use arbitrary Digest-compatible classes. It allows for an arbitrary number of iterations of the hashing function, and a nearly unlimited output hash size (up to 2**32 - 1 times the size of the output of the backend hash). The hash is salted, as any password hash should be, and the salt may also be of arbitrary size. -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20140202010334.23948.56947.report...@windlord.stanford.edu
Re: Re: Bug#1393: dpkg does not need splitting
On Sun, Feb 2, 2014 at 7:24 AM, Ian Jackson wrote: > Is this some kind of spam, or what ? I assumed so. > I can't find offhand what #1393 was (I haven't searched my archives). > iw...@cus.cam.ac.uk used to be me. (Indeed the entire BTS ran out of > that account for the first bit of its life, but I don't think that's > relevant here.) There is no record of #1393 in the BTS but it appears that we have a copy of it in the debian-devel archives: https://lists.debian.org/debian-devel/1996/01/msg00024.html -- bye, pabs http://wiki.debian.org/PaulWise -- To UNSUBSCRIBE, email to debian-devel-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/caktje6gfy0tyq5wd4k_llb4bgpnsd17b-_sw6d7umnoqy41...@mail.gmail.com