Dear all,
Currently I am trying to update my package (GALLO) with some small edits in the
code. However, the package is not passing in the automatic check. I am getting
only two warnings:
The first one is a warning related with the maintainer email (my email in the
case), which is correct. I r
On 05/11/2020 10:55 a.m., Pablo Fonseca wrote:
Dear all,
Currently I am trying to update my package (GALLO) with some small edits in the
code. However, the package is not passing in the automatic check. I am getting
only two warnings:
The first one is a warning related with the maintainer ema
Dear Duncan Murdoch,
Thank you for the quickly reply. Yes, the package is on Github. Any comment or
suggestion will be very welcome.
https://github.com/pablobio/GALLO
Kind regards.
Pablo Augusto de Souza Fonseca, Ph.D.
Postdoctoral Fellow at University of Guelph
Centre for Genetic Improvement
Hi Pablo,
"The magick package is required to crop" is related to using
BiocStyle for your vignette. Not sure what causes it, but I reported
this error some time ago:
https://github.com/Bioconductor/BiocStyle/issues/77.
On related issues and on bioc-devel mailing list
(https://stat.ethz.ch/piperma
Dear Llu�s Revilla,
Thank you very much for the comments and suggestions. I changed the vignette
format from the BiocStyle to a regular html. However, I am still getting an
error. Now, the error is "Input vector too short" and it is related with the
same code chunk lines 465-506.
I can't figu
Dear Pablo,
Sometimes when building a vignette the lines reported are a bit off (I
usually check the code above and below those lines).
I could reproduce the error on R 4.0.1, the error is triggered on
lines 515-519 on the following code:
relationship_plot(qtl_file=out.qtls.filtered, x="Abbrev",
