Thanks, Duncan!
Is there a way to override this using the command line arguments?
I'd like to be able to have a generalizable way to address this without
having to modify R source code.
My understanding is that when there is a plot output, R CMD BATCH uses the
PDF device which is a fair default.
However, there is not any use of `dev.new()` or `pdf()` called anywhere in
the code.
On Sun, Jul 28, 2024 at 3:44 PM Duncan Murdoch <murdoch.dun...@gmail.com>
wrote:
> On 2024-07-28 1:48 p.m., Josiah Parry wrote:
> > Hey folks! I am working with R CMD BATCH and providing a providing a
> > logfile output e.g.
> >
> > R CMD BATCH main.R 2024-07-28.log
> >
> > This creates the desired log file with the contents of stdout and stderr.
> >
> > However, if plots are generated in the process, the plots are stored in
> > Rplots.pdf.
> >
> > Is there a way via command line arguments to change the name of the pdf
> > output.
> >
> > There might be multiple runs of this script and it would be ideal to
> store
> > the plot output independently.
>
> That's the default filename if you open a PDF device. Open it
> explicitly and you can specify any file you like.
>
> That is,
>
> plot(rnorm(100))
>
> will call dev.new() which in a non-interactive session calls pdf(). If
> you specify
>
> dev.new(file = "something.pdf")
> plot(rnorm(100))
>
> the "file" argument will be ignored in an interactive session, but will
> be used in a non-interactive one.
>
> Duncan Murdoch
>
>
>
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