On 07/04/2021 4:49 a.m., rosario.avo...@unina.it wrote:
Hi everyone,

I hope this is the right e-mail I should have used; this is the first time
that I ask for help with R!

Yesterday, I installed the devel version of R (4.1) as I need to use a
package (RiboDiPa) which only works for this version.

The package requires, among the others, the package "rtracklayer". Since
yesterday I am struggling trying to install rtracklayer for devel version
without success.

Below you can find the final message I got before the installation stops.
Any idea of what might be the reason why I cannot install rtracklayer?

ucsc/udc.c:46:10: fatal error: sys/mman.h: No such file or directory

#include <sys/mman.h>

           ^~~~~~~~~~~~

compilation terminated.

make: *** [Makevars.win:16: ucsc/udc.o] Error 1

ERROR: compilation failed for package 'rtracklayer'

* removing 'C:/Users/Rosario/Documents/R/win-library/4.1/rtracklayer'

If you need any other information please, do not hesitate to ask.

Thank you in advance for your help!

rtracklayer is a Bioconductor package, so you're probably better off asking on their support site https://support.bioconductor.org/. When you do, please show the command you used for the install; it's possible a simple change there will fix things.

Duncan Murdoch

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